Mesocricetus auratus (golden hamster): 101828104
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Entry
101828104 CDS
T08306
Symbol
Pdzrn3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maua04121
]
101828104 (Pdzrn3)
Enzymes [BR:
maua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101828104 (Pdzrn3)
Ubiquitin system [BR:
maua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101828104 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-C3HC4_3
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101828104
NCBI-ProteinID:
XP_005071271
UniProt:
A0A1U7QNH3
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQELPEHLERCDFAPARCRHAGCGQL
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPASESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSSHEYYDPNDYMGDIHQDMDREELELEEV
GLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGEDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDVDYLGIPVDECERFRELLELKCQVQSSS
SPYSLYYPSSPLDAAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRES
WMLHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNS
LRRMAEGSSEGAAASIEAYRPSPKNLLAITEDPEVSTPNYSPSAKELDPSQALESKERRV
SDGSRSPTASPKLGSAYLPPYHHSPYKHAHIPAHAQHYQSYMHLIQQKSAVEYAQSQMSL
VSMCKDLNSSNSAEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGLTTDDD
AMSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILELSH
KKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgagttggaccgcttcgacggcgacgtggaccccgatctgaagtgcgcgctg
tgtcacaaggtcctggaggacccgctgaccaccccgtgcggccacgtattctgcgccggc
tgcgtgctgccctgggtagtgcaggagggcagctgcccggcgcgttgtcgcggtcgcctc
tcggccaaggagctcaaccacgtcctgccgcttaagcgcctcatcctcaagttggacatc
aagtgcgcgcacgcggcgcggggctgcggccgggtggtcaagctgcaggagctgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccagctg
ttgctgcgacgcgacgtggaggcccacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgccgctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggctctgcgggctcacaacggcgccctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgggccggcaagcgcgagaagtcgctggtggcg
cagctggccgccgcgcagctcgaactgcagatgaccgccctgcgctaccagaagaagttc
accgagtacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagagaccaaaagcctgactcttgtcctgcatcgggactctggatccctgggg
ttcaatattattggcggccggccctgtgtggacaatcaagatggatcctccagtgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaggacttgtctcgagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccattgtggtacaggtattgaggaggacacct
cgaacaaaaatgttcacacctgcctcagagtcacagctggtagacacaggcacccaaacc
gacatcaccttcgagcacatcatggccctgacaaagatgtcttctcccagcccacctgtt
ctggatccctatctgctgcctgaagagcacccctcatcccatgaatactatgatccgaat
gactacatgggagacatccatcaggacatggacagagaagagttggagctagaggaagtg
ggcctctacaggatgaacagccaggacaagctgggcctcaccgtgtgctaccggacggat
gatgaagatgacattgggatctatataagtgagattgaccctaacagcatcgcagccaag
gatggacgcatccgtgaaggagatcgcatcatccagattaatgggatagaggtgcagaac
cgtgaagaggcggtggctcttctaaccagtgaagaaaacaagaacttttcattgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgacaggaacgactttctg
gatgacttacacatggacatgctggaggagcagcaccatcaggccatgcagttcacggcc
agtgtgctccaacagaagaagcatgaggaagatggtggaaccaccgacacagccaccatc
ttatccaaccagcacgagaaagacagcggtgtggggcggacagatgagagcacccgcaac
gatgagagctctgagcaggagaacaatggtgaagatgccacggcgtcctccaacccgctg
gcgggccagaggaagctgacctgtagccaggacaccctaggcagtggcgacctgcctttc
agcaacgaatccttcatctctgcagactgtaccgatgtggactacctgggcatcccagta
gatgagtgtgagcgttttcgcgagctgctggagctcaagtgccaggtgcagagcagcagc
agcccctacagcctgtactaccccagcagcccactggacgctgctggcaagagtgaccct
gagagtgtggacaaggagctggagctgctcaacgaggagctgcgcagcatcgagctggag
tgcctgagcatcgtgcgtgcgcacaagatgcagcagcttaaggagcagtaccgcgagtcc
tggatgctgcaccacagtggcttccgcaactacaacaccagcgtggatgtgcgccgccat
gagctctcggacatcacggagcttcccgagaagtcagacaaggatagctcgagcgcctac
aacactggggagagctgccggagtaccccactcaccctggagatctccccagataactcc
ctacggaggatggccgagggaagtagcgaaggggccgcagccagcatcgaagcttacaga
ccatcccccaagaatctgctcgccatcactgaggatcctgaagtaagcaccccaaactac
agccctagtgccaaagagctggaccccagtcaggccctggagagcaaagagcgccgagtt
agtgatggcagcaggagccccactgccagcccaaagctgggcagtgcctacctgccccct
taccaccactccccgtacaagcatgcgcacatcccagcgcacgcacagcactaccagagc
tacatgcacctgatccagcagaagtcggcggtggagtatgcgcaaagccagatgagcctg
gtgagcatgtgcaaggacttgaactcctctaactcggccgaaccccggatggagtggaaa
gtgaagattcgcagtgacgggacccgctacattaccaaaaggccggtgcgtgaccggctg
ctgcgggagcgcgccctgaagatccgcgaggaacgcagtggcctgaccacggatgacgat
gccatgagtgagatgaagatggggcgctactggagcaaggaggagcgcaaacagcatctg
gtgaaggccaaggagcagagaaggaggcgcgagtttatgatgcagagcaggctggattgt
ctgaaggagcagcaggcagctgacgacaggaaagagatgaacatcctggaactgagccac
aaaaagatgatgaagaagaggaacaaaaagatctttgacaattggatgaccatccaagaa
ctcttaacccatggcacaaaatcgccagacggcactagggtatacaattccttcctgtcg
gtgactactgtttaa
DBGET
integrated database retrieval system
