Mesocricetus auratus (golden hamster): 101828344
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Entry
101828344 CDS
T08306
Symbol
Lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03018
RNA degradation
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101828344 (Lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
101828344 (Lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101828344 (Lsm2)
03041 Spliceosome [BR:
maua03041
]
101828344 (Lsm2)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101828344 (Lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
101828344 (Lsm2)
Spliceosome [BR:
maua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101828344 (Lsm2)
Complex C
U2 snRNP components
101828344 (Lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
101828344
NCBI-ProteinID:
XP_005086888
EnsemblRapid:
ENSMAUG00000021966
UniProt:
A0A1U7RGK5
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctactccttcttcaaatccctcgtgggcaaggatgtggtcgtggagctcaag
aatgacctgagcatctgtggaaccctccactctgtggaccagtacctcaatatcaaactc
actgacatcagcgtcacagaccctgagaagtaccctcacatgttgtcggtcaagaactgc
ttcatcaggggctcggtggtccgctacgtgcagctgccggcagacgaggtggacacgcag
ctgctgcaggacgccgccaggaaggaagcccttcagcagaagcagtga
DBGET
integrated database retrieval system
