Mesocricetus auratus (golden hamster): 101828402
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Entry
101828402 CDS
T08306
Symbol
Smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03082
ATP-dependent chromatin remodeling
maua04714
Thermogenesis
maua05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101828402 (Smarca2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101828402 (Smarca2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101828402 (Smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maua03021
]
101828402 (Smarca2)
03036 Chromosome and associated proteins [BR:
maua03036
]
101828402 (Smarca2)
Transcription machinery [BR:
maua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101828402 (Smarca2)
Chromosome and associated proteins [BR:
maua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101828402 (Smarca2)
Chromatin remodeling factors
BAF complex
101828402 (Smarca2)
PBAF complex
101828402 (Smarca2)
GBAF(ncBAF) complex
101828402 (Smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101828402
NCBI-ProteinID:
XP_040601983
UniProt:
A0ABM2XGV8
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGMHQMHKPMDGIHDKGIIDDAHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDLQAMNQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQPQQQQQQPQQPQQ
QVQPQQQQQQQQQPALVNYNRPSGPGQELLLSGQNTPQKLSAPAPSGRPSPAPPAAAQPT
AVAVPGPSVQVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAH
RIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYK
RSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKL
SKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEY
VANLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAEGGESALGPDGEPIDESSQMSDLPVK
VTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQET
EEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQS
ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPY
LIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKD
KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLN
FLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKIC
NHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMT
SLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ
AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ
KVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRM
DMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDY
SDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKL
SPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSGPALYPHVSKHSSGRQL
SEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNL
EGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDEEEESESEAKSVKVKIKLNK
KEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSEASGPDDE
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagacccagctgcaatgccccatcctgggccctccccagggcctgga
ccctctcctggaccaattctggggcctagtccaggaccaggaccatccccaggttcagtc
cacagcatgatggggcccagtcctggaccccccagtgtctcacatcctatgccaacaatg
ggctctgcagacttcccacaggaaggcatgcaccagatgcataagcccatggacgggata
catgacaaggggattatagacgatgcccactgtggatccatgaagggcaccagcatgcgc
ccaccacacccaggaatgggccctccacagagcccaatggatcagcacagccaaggttat
atgtcaccacatccgtctcctttgggagccccagagcacgtctccagccctatatctgga
ggaggcccaaccccaccccagatgccaccgagccagccagggccactcatcccaggagat
ctgcaggccatgaaccagcctaacagaggtccttcgcctttcagtcctgtccagctgcat
cagcttcgagctcagattttagcttacaaaatgttggccaggggccagcccctccctgaa
acactgcagcttgcagtccaggggaaaaggaccttgcctggcatgcagcagcaacagcag
cagcagcaacagcaacagcagcctcagcagcaacagcagcagccccagcagcctcagcag
caggtgcagccacagcagcaacagcagcagcagcagcagccagcccttgttaactacaac
agaccatctggccctgggcaggagctgctgctgagtggtcagaacaccccacagaagctg
tcagcaccggcacccagcggccggccatcgccagcacccccagccgctgcccaacccacc
gccgtagctgtgcctgggccctcggtgcaggtacagcagcctgccccagggcaaccgtct
ccggtcctgcagctgcaacagaagcagagccgcatcagccccatccagaaaccgcaaggt
ctcgaccccgtggagatcctgcaggagcgcgagtacagactgcaggctcgcatagctcat
aggatacaggagctggaaagtctgcctggctccttgccaccagatttacgaaccaaagca
actgtggaactgaaagcacttcggttactcaatttccaacgtcagctgagacaggaggtg
gtggcctgcatgcggagggataccaccctggagacggccctcaactccaaagcatacaag
cggagcaagcgccagaccctgcgagaggcacgcatgacggagaaactggagaagcagcag
aagatagaacaggagaggaaacggcgccagaagcaccaggaatacctgaacagtattttg
caacatgcgaaagattttaaggaatatcaccggtctgtggctgggaagatccagaagctg
tccaaagcagtggcgacttggcacgctaacactgaaagggagcaaaagaaggagacggag
cggatagagaaggagagaatgcggagactgatggctgaagacgaggagggctacaggaaa
ctcatcgaccaaaagaaagacagacgcttagcataccttttgcagcagactgatgagtat
gtggccaatctgaccaacctggtttgggagcacaagcaggcccaagctgccaaagagaag
aagaagaggaggaggaggagaaagaaggctgaggagaatgcagagggaggggaatctgcc
ctgggaccagatggagagcccatagatgaaagcagccagatgagtgacctgcctgtcaaa
gtgacacatacagaaactggcaaggtcctctttggaccggaagcacccaaagcaagtcag
ctggatgcctggctggagatgaaccctggttatgaagttgcccccagatctgacagcgaa
gagagtgactctgattacgaggaagaggatgaagaagaagagtccagtaggcaggaaacg
gaggagaagatactgctggatcctaacagtgaagaagtttccgaaaaggatgccaagcag
atcattgagactgcgaaacaggatgtggacgatgagtacagcatgcagtacagtgccaga
gggtcacagtcctactacacagtggcccatgccatctctgagagggtagagaaacaatcc
gccctcctcattaatgggaccctaaagcattaccagctccagggcctggaatggatggtt
tccctgtataataacaatctgaatggaatcttagctgatgaaatggggctaggcaagacc
atccagaccattgcactcatcacgtatctgatggagcacaagagactcaatggcccctat
ctcatcattgttcccctctcgactctgtctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaaaatttcttacaagggtacccctgccatgcgacgctcccttgttccc
cagctacggagtggcaaattcaatgtcctcctgactacttatgaatacattataaaagac
aagcacattcttgcaaagattcggtggaaatacatgatcgtggatgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcttgaacacacactacgtcgcccccagaagg
atccttttgactgggaccccgctacagaataagctccctgaactctgggcccttctcaac
ttccttctccctacaatcttcaagagttgcagcacattcgagcagtggtttaatgctccg
tttgccatgactggcgaaagggtggacttgaatgaagaggaaactatcttgatcatcagg
cgtctgcacaaggtgttgagaccctttttactgaggaggctgaagaaagaggttgaatct
cagcttccagaaaaggttgaatatgtgatcaagtgtgacatgtcagctctgcagaagatt
ctgtatcgtcatatgcaggcaaaggggatcctcctcacagatggttctgagaaagataag
aaggggaaaggaggtgctaaaacgcttatgaacactatcatgcagctgaggaagatctgc
aaccacccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattca
aatggggtcatcaatggggctgagctgtatcgggcctcggggaagtttgagctacttgac
cgtattctgcccaaactgagagcgactaaccaccgcgtgctgcttttctgccagatgaca
tctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgcctt
gatggcaccaccaagtctgaagatcgggcggctttgctgaagaaattcaatgaaccaggg
tcccagtatttcattttcttgctgagcacacgagctgggggcctgggtttaaatcttcag
gccgcggacacggtggtcatctttgacagcgactggaatcctcatcaggatctgcaggcc
caagaccgagctcaccgcattggccagcaaaacgaggtccgggtgctgaggctctgcacc
gtcaacagtgtggaggaaaagattctcgcagctgcaaagtacaagctgaatgtggatcag
aaggttatccaggccggcatgtttgatcagaagtcatccagccacgagcggagagcattc
ctgcaggccatattggaacatgaagaggagaacgaggaagaagatgaagtaccagacgac
gagaccctgaaccagatgattgctcgccgggaagaagagtttgatctttttatgcgcatg
gacatggaccggcggagggaggatgccaggaatccaaagcgcaagcctcgcctgatggag
gaagatgagctgccctcctggattattaaggatgatgctgaggtggaaaggcttacctgt
gaagaagaggaggagaaaatatttggtaggggttcacgccagcgccgggatgtggactac
agcgacgccctcaccgagaagcagtggctcagggccatcgaagacggcaatttggaagaa
atggaagaggaagtacggctcaaaaagagaaaaagacgaagaaacgtggataaggatccc
gtgaaggaggatgtggagaaggcgaagaaaaggagaggccgccctccagctgagaaactg
tcacccaatccccctaaactaacgaagcagatgaatgccatcatcgatactgtgataaac
tacaaagacaggtgtaacgtggagaaggtgccctgtaattctcagttggaaatagaagga
aacaggtcaggacctgccttgtatccccatgtctctaaacacagttcagggcgacagctc
agtgaagtcttcatccagttaccttccaggaaagaattaccagaatactatgaattaatt
aggaagccagtggatttcaaaaagataaaggaaagaattcgtaatcacaagtaccggagc
ctgggtgacctggagaaagatgtcatgcttctctgtcacaatgcgcagacattcaacttg
gaggggtcccagatctatgaagactccattgtcctacagtcagtatttaagagtgctcgg
cagaaaatcgccaaagaagaagagagtgaggaagaaagcaatgaagaggaggaggaagat
gaggaggaggagtccgagtcagaggcaaaatccgtgaaggtgaaaatcaagctcaataaa
aaagaagagaaaggccgggacacagggaaaggcaagaaaaggccaaaccgaggcaaagcc
aaacctgttgtgagcgattttgacagcgacgaggaacaggatgagaacgaacagtcagag
gcaagtggccctgacgatgagtga
DBGET
integrated database retrieval system
