Mesocricetus auratus (golden hamster): 101828403
Help
Entry
101828403 CDS
T08306
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101828403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maua02000
]
101828403
Transporters [BR:
maua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101828403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_15
AAA_23
SRP54
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
101828403
NCBI-ProteinID:
XP_040611342
UniProt:
A0A3Q0CR53
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MDSLHMKQFSILLWKNFLLKKRNVVGLVVEILLIFLLFAWTLTVRKITKKTFSHGATFSP
IPLTLPKFLNKKFEFELAYVPSKSDAARNITEMVKKDLNFNFKVQGFSSEESFEKYIKYK
NKSTYVLAAIVFDHMFKTNNERLPLQVKYNLRFGHLYDTKNPLEPSKDQNIKDWNTSVLF
PSVPSLGPRNFMENNGGDPGYIREGFLIVQHSLDKAIMVYHSGRAAEDMFANATIYAQRF
PYPAFIVDNFLWTFMPMFSWTILFTFTQMALVIVGTIMLEKEKRLKEYQLVVGLSNAMLW
VSYFVTFLLMYFIIICLLCGILFLKITHERVFQHSDPLFIAFYFLCFAIPSVLFGFMVST
FFDKASLATSVAGFLHFLTFFPYLIIISMYNQISLGGKLALSLITNTALAFGTDLICKME
MKGHGAQWYNFATKISVDDDLTLAHIIGMFLFSAFLYGLVAWYVDAVFPGKYGVPKPWNF
FLQKTYWFGEPVLSKEESQVTDLTPSNFIEPEPVGLTAGIRIQHLYKKFTLKNSTLMAVK
DLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVFISGYDISSDMVQVRKSLGL
CPQDDLLFPMLTVLEHLYFYYVIKGIPLKKRSKEIHRMLTSFGLLDKSDTLSKDLSGGMK
RKLSIIIALIGDTKVVILDEPTSGMDPVSRRTTWDLLQQYKKNRTVLLTTHHMDEADVLG
DRIAIMVSGTLKCCGSSFFLKKLYGVGYHLVMVKTPKCDVEKISQLIRSHIPTAELEMDV
AAELSFILPKEYTNRFAELFTVLEERQKELGITGFGVSMTNIDEVFFKVSNPPDLKLNTE
TVHSASNQSTREDNQNMNVPRNFDRADYPRGQFNSSFNTGCALYTQQFRAMLIKRVMYSW
RNWKLLLLQLLALLGLMYFLIEGISFPTREMPARVMDLEQYGETIVPFSISGDPNLTQSF
TKNLEIMLKAKNQKLHEVQGDVQKYLKTNKECIYSCIIAFSLDVTRDKKTFIFWFNNEAY
HSSSLSLSVLDNIIFMSLSGPDATITVSNKPQPQPVIQDKSDKRYIPGFEIVFNLLFGMS
VFTSGFCLMTVTERVSKAKHIQFVSGVYTFNFWLSALLWDLTIHFVACALLLLVFLITDV
HTLLEKYNFLDTMFILMLFGWSVIPFIYLLSFWYNNSTSAYVKIFVFNHCLGFISVIVDL
VVHIIPDIKTSTKNLILNSLLILPVYNLGMSINKYYEIQELRKMCSSSKYVSVLNECNNI
NDLPIYSMNQNAIGRHVTAMAATGAIYLFFIFLLELTTWNLKTFIYRYVFFGIYRIFSKA
RVSRELSGESEDEDVQNERETILQNPRQSLNSSVLIKELIKIYFNIPPTLAVRNISVSIQ
KEECFGLLGLNGAGKTTTFEILTGEQIATSGDVYIEGYSITKNILKVRSKIGYCPQFDAL
LDHMTTREILIMYARVWGIPENNIGAYVDNLLEILYLQSQAEKFIYTLSGGNKRKLSTAI
AIMGKSSVVFLDEPSTGMDPVARRMLWNTVTRTRESGKVIIITSHSMEECEALCTRLAIM
VQGKFMCLGSPQHLKNKFGNVYTMNIKFKTGASGDVIMDFKNFITKVFPGSKLKQENQEI
LNYHIPSKDNSWGKVFGILEKAKEQYDLEDYAISQITLEQVFLSFASPGNTDTGYAKAKE
VP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggattcattgcacatgaagcaattttcaatcctcctttggaaaaatttccttttgaag
aagcggaatgtggttggcttagtagtagagatcctcttgatatttctgttgtttgcatgg
actttaactgtacgcaaaattacaaagaagacattttctcatggtgcaacttttagtcct
attcccctgacgttacccaagttccttaataaaaagtttgaatttgaattggcttatgtg
ccttctaagagtgatgcggcaagaaatattactgagatggtgaaaaaggatttaaatttc
aactttaaagttcaaggcttctcttctgaagaatcttttgagaaatacattaaatataaa
aacaagtctacatatgtgctggctgctattgtgtttgatcacatgttcaaaaccaacaat
gaacgcttgccacttcaggtaaaatataatttgcgctttggtcatctctatgatactaag
aatcccttagagccgtccaaggaccagaacataaaggactggaacacatcggttctcttc
ccatctgtgccttctctaggaccccggaactttatggaaaacaatgggggagaccctgga
tacatcagagaaggatttcttatcgtgcagcattccttagataaggccatcatggtgtat
catagtggcagagcagcagaggacatgtttgctaatgccaccatttatgcacagagattc
ccataccctgctttcattgtcgacaacttcttgtggactttcatgcctatgttttcttgg
acaattttatttacatttactcaaatggcacttgtcattgttgggaccattatgttggaa
aaggaaaagagattaaaggaataccagcttgtggtgggactcagtaatgctatgctctgg
gtttcatattttgtcaccttcttattgatgtatttcattatcatctgtttgctgtgtggg
attttatttctcaagattacacatgagagagtctttcaacacagtgacccattattcatt
gccttctatttcctgtgttttgccatcccctcagtgttatttggcttcatggtcagcaca
ttctttgataaagcttctctggccacttctgttgcaggtttcctccactttctcacgttt
ttcccgtacctaatcataatttcgatgtacaatcagataagtctcggtgggaaactggct
ctcagtctcatcacaaacacagcgctagctttcgggaccgacttaatatgcaagatggaa
atgaaaggacatggtgctcagtggtacaactttgctacaaaaataagtgtcgatgatgac
ttaactttggctcatataataggaatgtttttatttagtgcttttctctatggccttgtg
gcctggtatgtagatgctgtctttccaggaaagtatggtgtacctaagccctggaacttt
ttcctgcagaaaacctactggtttggagagccagtcttaagcaaggaagagagccaagtc
actgatttaaccccaagcaattttattgagcctgaacctgttggcttaacagctggcatc
cggattcagcatttgtacaagaaattcaccttaaaaaatagtaccctgatggctgtaaaa
gacttgtctttgaacttgtatgagggacagataacagttcttctaggacataacggggca
ggaaagaccaccactttatccattctcacaggtttgtatcttcctaccagaggaaaggtc
tttattagtggatatgacatctcatctgacatggttcaagttagaaaaagcttgggcttg
tgtccgcaggatgacctgttgttcccaatgctgacggtgttagaacacctttatttctac
tatgtgataaagggaatacctttgaagaaaagatctaaagaaattcacaggatgctcacc
tcttttggcctgctagataaaagtgatacactgtcaaaggatcttagtggaggaatgaag
cgcaaactctcaatcattatagctcttataggagatactaaggtggtgatacttgatgag
ccaacatctggcatggatccagtctcaaggaggaccacctgggacctccttcagcaatat
aaaaagaaccgtacagtcctgctgaccacacaccacatggatgaagctgatgtgctgggt
gatcgcattgccatcatggtctcagggaccctgaagtgctgtggctcttcatttttcctg
aagaaactatatggtgtgggatatcacctagtcatggtgaagactcctaaatgtgatgtt
gaaaaaatctcccagctgattaggagtcatataccaactgctgagctggagatggatgtt
gcagctgaattgtcatttattctgccaaaggagtacaccaacagatttgcagaacttttc
acagtcctagaagaaagacaaaaagaactgggcatcactggctttggtgtctccatgact
aacattgatgaggttttcttcaaggtcagtaatccgccagacttgaagttgaatactgag
actgtccattcagcttccaaccaaagcacacgtgaagataaccagaatatgaatgtgccc
aggaattttgatagagcagattatccaagaggacaatttaattcttcattcaatactggg
tgtgctctttacacccagcagttcagggccatgctcatcaaaagggtaatgtactcttgg
cgcaactggaaactgctgttgttgcagttgctggcacttctgggtctcatgtattttctg
atagaaggtataagcttcccaacacgcgaaatgcctgccagggtgatggacttggagcag
tacggtgagaccattgtgcctttctcaatttctggagatcctaatttgacccagagtttc
accaaaaatcttgagatcatgttaaaggctaaaaaccaaaaacttcatgaagtgcaaggt
gatgtgcagaagtacttgaagacaaataaagaatgcatttattcatgcatcattgcattt
tcccttgatgttactagagacaagaagacatttatcttttggttcaacaatgaggcatac
cattcatcatcattatccttgtcagttttagacaatattatttttatgtctctctctggc
cctgatgccaccattactgtttccaacaagcctcagcctcaacctgtcattcaggacaaa
tctgataaaagatacataccaggattcgagatagtctttaacttactctttgggatgagt
gtgtttaccagtggcttttgccttatgacagtgactgagagagttagtaaagcaaagcac
atccagtttgtgagtggagtctacacctttaatttttggctctctgctctgctatgggat
ctgactatccattttgttgcctgtgctctattgctgctggtgttcctaatcactgatgta
catacattgttggagaaatacaatttcctggacacgatgttcatcctcatgctgtttgga
tggtctgtcatccccttcatctacctgctaagcttctggtacaacaatagcaccagtgcc
tatgtcaagatttttgtcttcaaccactgtttagggtttattagtgtaattgtggactta
gtggtacatatcataccagacattaagaccagtactaagaacctcatacttaactcattg
ctgatattacccgtttataaccttgggatgagcatcaacaaatactatgaaatccaagag
ttgaggaaaatgtgttcttcttcaaaatatgtttctgtgcttaatgaatgcaacaacata
aatgatcttcctatatacagtatgaatcaaaatgcaattggaaggcatgtgactgcaatg
gctgccacaggagcaatatacctcttcttcattttccttctggagcttaccacatggaat
ttaaaaacattcatatatcgctatgttttctttggaatctataggatatttagtaaggct
agagtgtccagagagctatctggggaatctgaagatgaagatgtacagaatgaaagggag
accatcctgcagaatcctcggcagtcactgaattctagtgtgctcattaaagagcttata
aagatatattttaatataccacccactctggctgtgagaaatatctctgtctccattcaa
aaggaagagtgttttggattgcttggactaaatggagctggaaaaactactacctttgaa
attctgactggagaacagattgctacatctggggatgtgtacattgaaggctatagcatc
accaaaaatatcctaaaggtaaggtcaaaaattggctattgcccacaatttgatgccttg
ctggaccacatgactacacgggagatattgatcatgtatgccagggtgtgggggattccg
gagaacaatattggagcctatgtggataacttgttggaaatactgtacctacaatcacaa
gctgagaagtttatttacactttgagtggaggaaacaaacgtaaactgagcactgctatt
gccataatgggaaagtcatcagttgtcttcctagatgagccgtctactggcatggaccca
gtagcccggcgcatgctttggaatacagtgacaaggacacgagagagtggcaaggtcatc
atcataacttctcacagtatggaggagtgtgaggctctctgtaccaggctagccatcatg
gtgcagggaaagttcatgtgcctgggtagccctcagcatctcaaaaacaaatttggcaat
gtttacaccatgaatatcaagttcaaaactggcgctagtggtgatgtaataatggatttt
aaaaactttattaccaaggttttcccaggtagcaagttgaagcaggagaatcaagagatc
cttaattaccacattcccagcaaggacaacagctggggaaaggtgtttggcattctggag
aaagcgaaagaacaatacgatctagaagactatgccatcagtcaaatcaccctggagcaa
gtcttcctgtcctttgccagcccaggcaacacagacactggttatgcaaaagcaaaagag
gtgccttga
DBGET
integrated database retrieval system
