Mesocricetus auratus (golden hamster): 101828711
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Entry
101828711 CDS
T08306
Symbol
Topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101828711 (Topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maua03032
]
101828711 (Topbp1)
03400 DNA repair and recombination proteins [BR:
maua03400
]
101828711 (Topbp1)
DNA replication proteins [BR:
maua03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101828711 (Topbp1)
DNA repair and recombination proteins [BR:
maua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101828711 (Topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
101828711
NCBI-ProteinID:
XP_040595694
UniProt:
A0A1U8BWG7
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MSRNDQEPFFVKFLRSSDNSECFSKALESIKKLQSEDCLQIITEEEALKIKENDRSLYVC
DQFSGVVFDHLKQLGCRIVGPQVVTFCMRHQQCVPRAEHPVYNMIMSDVTISCTSLDKDK
REEVHKYVQMMGGQVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
ENKITRYTDINMEDFKCPVFLGCIICVTGLNGIHRKTVQQLTAEHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTLQWFHDSIEKGFCQDESIYKAEARAEIKTVPDTSTPT
AHSNAAAESRTLADVSHISNINGSCINETMFSSTTSKLECTLENLENLDISVFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYEDDLKQFWNKSSHRP
HVVGAKWLLECFSKGYMLPEEPYIHTNYQPAGIPVSDQPENQTTVLEKSSISSKKDFTPN
EKLQQADEDLLSQYVNDDSTVVEAKPSESIELEAGPCSDSTQVEPCDESTHISVQEEDPS
SVSHCLLDGSADPEEGLFSRKSFLVLGFSIENECNIVNIIREHAGKIVSLPSRIVADFAV
VPLLGCEVEATVGEVVTNTWLVTCIDYQTLVDPKSNPLFTPVSVMSGMTPLKDCVISFSQ
CVGAERDSLVFLANHLGASVQEFFVRKSSAKKGMLASTHLIVKEPIGSKYEAAKKWSLPA
VTISWLLETARMGRRADERHFLVDSAPKQEQVLETKLPNGVSPNSDSPAHPDTHLDMHRK
VAVTPLDMNRFQSKAFHAVISQHCKQESVSSTVGQPLKREPSLHLDTPSKFLSKDKLFKP
SFDVTDALAALETPRAATQQRKPSSPLSEVIVRNLKVALANSSRNTSALSASPQLKGAHL
EEEEAPKPLDKVVVCVSKKLSKKQSELNGVAASLGAEYRWTFDESVTHFIYQGRANDSNR
EYKSAKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGCLSNSRVSS
AVPASMDDEPDHLSVEENETNSMVTNIKESALLNGNGRNDCKGALTQTLEMRENFQKQLQ
EIMSATSIVKMPAQRNCLSRSSCNSASSTPDSARSARSGRSRVLEALRQSRQIVPDINTE
PSQNEQIIWDDPTAREERARLASNLQWPSYPTQYSELQVDIKKLDDSPSLEPVYHSELAE
QALSMTKAPEHPVSEEAETLATDKHPIPVLQAPSIAFPLANPPVATHPMDKIETMEESHE
NLKKQYVFQMSSLNSQERIDYCHLIKKLGGSVIEKQCSDPNCTHMVVGYPLRNEKYLASM
AAGKWVLHRSYLEACRTAGRFVQEEDYEWGSSSILDALTDVTEHQQKLALAAMRWRKRIQ
QRQESGIIEGAFSGWKVILRVDRPREAGFKRLLQAGGAKVLPAQPVPLFNEATHLFCDFN
KLKPDDCRVFIAEAAAQNMACLKTEYIADYLMLESPPCADNYRLSEAALLQNKDSEPGLC
QKRRAPAENITKRPRVH
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgaccaagaaccgttttttgtgaagtttttaaggtcttcagacaattca
gaatgtttttctaaagctcttgagtcaataaagaaattacaatcagaagactgtcttcaa
attattacagaggaggaagcattgaagataaaggaaaatgacagatcactttatgtctgt
gaccaattcagtggtgttgtttttgatcaccttaaacagcttggctgcagaattgttggt
cctcaagtagtcacgttttgtatgcgccaccagcagtgtgtcccaagagctgagcatcca
gtttacaatatgattatgtctgatgtaactatatcgtgtacaagcctggataaagacaaa
agggaagaagttcataaatatgtacaaatgatgggtggacaagtatatagagacctgaat
gtatcagtcactcaccttattgcaggagaagttgggagcaaaaaatacctagttgctgct
aatctgaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaa
gagaacaaaataaccagatacactgacataaacatggaagactttaagtgtcctgttttt
cttggttgcattatctgtgtgactggcttaaatggtatacacagaaagacagttcagcaa
ctcacagctgagcatggaggccagtacatggggcagctgaagatgaatgaatgtacacac
ctcattgtccaagaaccaaaaggacaaaaatatgaatgtgccaagagatggaatgtgcac
tgtgtgaccctgcagtggtttcatgacagtattgagaaaggcttttgtcaggatgaatct
atatacaaggctgaagccagagcagaaataaagacggtgcctgatacttcaactcccact
gctcacagcaatgcagcagctgaaagtcgcactctcgcagatgtcagccatatatccaac
ataaatggcagctgtataaatgaaacaatgttcagctcaactactagcaaacttgaatgt
acacttgaaaacctagaaaatctggacatcagtgtgtttcaagcacccgaagatttgcta
gatggctgtcggatatatctttgtggttttagtggcagaaaactagataagctgagaaga
cttattaacagtggcggtggggttcgatttaatcaacttaatgaagatgtaactcatgta
attgtgggcgattatgaggatgacctgaagcagttttggaacaaatcatcccacaggcct
catgtagtgggagcaaagtggttgctggagtgttttagtaaaggatatatgctccctgaa
gagccatatatccacactaactaccaaccagctggaattccagtttcagatcagcctgaa
aaccagacaactgtcttggaaaagagcagcatatcttctaagaaagattttactcctaat
gagaaactccagcaagctgatgaggatctactctctcagtatgtaaatgatgactccaca
gtagtggaagctaagccgtctgaatctatagagcttgaagctgggccttgcagtgattct
actcaagttgagccctgtgatgagtctactcacatttctgtgcaagaggaagacccgtct
tcagtcagccattgcctccttgatggctctgcagatcctgaggaaggcttatttagtcga
aagagcttccttgtgttggggtttagtattgaaaatgaatgtaatattgtaaacatcata
agagaacatgctggaaagattgtgtcccttcccagcagaattgttgctgactttgctgta
gttccattgctcgggtgtgaagtagaggcaactgtgggagaagttgttacaaatacatgg
ctggttacatgtatagattaccagacactagttgatcccaagtccaatcccctcttcaca
ccagtgtcggtaatgtcaggaatgactcctttaaaggactgtgttatttccttcagtcag
tgtgttggagcagagagagattccttagtattcttagcaaatcatcttggagcaagtgtt
caagaattctttgttcgcaaatccagtgcaaagaaaggcatgcttgcaagtacacatctt
atagtgaaagaaccgattggttctaaatatgaagctgcaaagaagtggagtttgccggca
gtcactatttcatggctcttagaaactgctaggatgggaaggagagcagatgaacgccat
tttctggttgacagtgcacctaaacaagaacaggtattagaaactaagttaccaaatgga
gtgagtccaaattcagactctccagcacatcctgacacacatctggacatgcacagaaaa
gtggctgttactcctttggacatgaaccgctttcagagtaaagctttccatgctgtcata
tcacagcactgtaagcaggagtccgtctcttcaacagtagggcagccacttaaaagggaa
ccctccttacacctggatacaccatcgaagtttctgtccaaggacaaacttttcaaacca
tcttttgatgtgacggatgcacttgcagccttggaaaccccaagagctgccacccagcag
aggaaaccgagctcaccactctctgaagtcatcgtcagaaatctgaaagttgctttggca
aatagctcccgaaacaccagcgctctttctgccagccctcagctgaagggtgctcatttg
gaagaggaagaggctccaaaaccacttgacaaagttgtggtatgtgtgagtaaaaagctc
agtaagaagcagagtgaactaaatggggtcgcagcctcactgggagcagagtacaggtgg
acttttgatgagtcagtgactcatttcatttatcagggtcgggcaaatgatagtaatcga
gaatataaatctgcaaaggaaagaggggtgcacatcgtttccgagcattggcttttagag
tgtgctcaagagtataagcatcttcctgaatctctctatccacacacttacaatcccaaa
atgagcctggacatcagtacagtgcaagatggctgcctctctaatagccgggtatcctcc
gcagttcctgcatctatggacgatgagccagaccatttgtctgtagaagaaaatgagaca
aacagcatggtcacgaatatcaaagaatcagccctattaaatgggaatggaagaaatgac
tgcaaaggagctctgacacagaccttggagatgagagaaaacttccagaagcaattgcaa
gagatcatgtcagcaacttctatcgtgaagatgccggcacagaggaattgcctgtcaaga
agcagttgcaacagtgcttcttcaactcctgacagtgcacgttctgctcggagtggacga
agtcgcgtcctggaggcactcaggcagtctcgacagatagtgcctgatatcaacacagag
ccctcccagaatgagcagatcatttgggatgacccgacagcaagggaggagagagcaagg
ctcgccagcaacttgcagtggcctagctaccccacacagtattctgagcttcaggttgac
attaaaaaactggatgattctccttctctagagcctgtgtaccattcagaacttgctgag
caggccttgtctatgactaaagccccagaacacccagtctctgaagaagcagaaactcta
gccacagataagcatccaatccctgtgcttcaagctcccagcattgcttttcccttggcc
aacccgcctgtagctacacatcctatggacaagattgaaacaatggaggaaagtcatgaa
aaccttaaaaaacagtatgtgttccagatgtcgtctctgaattctcaagaacggattgat
tactgtcaccttattaaaaaactaggtgggtcagtgattgagaagcagtgctcagatccc
aactgcacacacatggttgtggggtacccgttgcgcaatgagaagtacttagcctccatg
gcagctggcaagtgggtacttcatcgttcctacctggaagcttgcaggacagctgggcgc
tttgtgcaggaagaagactatgaatggggaagtagttccatactggatgctctcactgat
gtcactgaacaccagcagaaactagcacttgcagcaatgaggtggaggaaaagaatccag
caaagacaagagtcaggcattattgagggagcatttagtggctggaaggttattttacgt
gttgatcggccccgagaagctgggtttaagcgtcttcttcaggcaggaggagcaaaggta
ttacctgctcaaccagtacctttatttaatgaggctacacatcttttttgtgacttcaat
aaactgaaacctgatgactgcagagttttcatagcggaggctgctgcccagaatatggcc
tgcttgaaaacagagtatatcgctgattacctcatgctggaatcgcctccttgtgcggat
aattaccgtctctccgaagctgctttactccagaataaagactccgagcctggattatgt
cagaagaggagagctcctgcagagaacatcaccaaacggcctcgagtgcactag
DBGET
integrated database retrieval system
