Mesocricetus auratus (golden hamster): 101828829
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Entry
101828829 CDS
T08306
Symbol
Smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03082
ATP-dependent chromatin remodeling
maua04714
Thermogenesis
maua05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101828829 (Smarca4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101828829 (Smarca4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101828829 (Smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maua03021
]
101828829 (Smarca4)
03036 Chromosome and associated proteins [BR:
maua03036
]
101828829 (Smarca4)
Transcription machinery [BR:
maua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101828829 (Smarca4)
Chromosome and associated proteins [BR:
maua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101828829 (Smarca4)
Chromatin remodeling factors
BAF complex
101828829 (Smarca4)
PBAF complex
101828829 (Smarca4)
GBAF(ncBAF) complex
101828829 (Smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Htt_C-HEAT
DUF2009
Motif
Other DBs
NCBI-GeneID:
101828829
NCBI-ProteinID:
XP_012974830
UniProt:
A0A1U8C8T6
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPMPTQG
PGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGTPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGSGPGSGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPLVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTPTTSTRSRDKDDDS
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGARRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatccacccctgggtgggactcctcggcctggtccttccccaggccct
ggcccctcacctggtgcaatgctaggccctagccctggcccctcaccaggctctgcccac
agcatgatggggcccagtccaggacctccttcggcgggacaccccatgcccacgcagggg
cctggaggataccctcaggacaacatgcaccaaatgcataagcctatggagtccatgcac
gagaagggcatgcctgatgacccacggtacaaccagatgaaagggatgggcatgcggtca
ggggcccacaccggcatgggacccccgcctagtcccatggaccagcattcccaaggctac
ccctcgcccctgggtggctctgaacatgcctccagtcctgtcccagccagcggcccatct
tcaggcccccagatgtcttctgggccaggagggaccccattagatggttcagacccccag
gctttggggcagcaaaacagaggcccaaccccgtttaaccagaatcaactgcatcaactc
agagctcagataatggcctacaaaatgttggccaggggccagccattgcctgaccacctg
cagatggccgtgcaaggcaaacgaccaatgcctgggatgcagcagcagatgccaacacta
cctccaccctcagtgtctgccacagggtctgggcctggctctggccctggccctggccca
ggaccaggaccagcccctccaaattacagtaggccccatggtatgggagggcccaacatg
cctcccccaggaccctcaggtgtgccccctgggatgcctggtcagccccctggagggcct
cccaaaccgtggcctgaaggacccatggccaatgctgctgcccccacaagcaccccacag
aagctgattcccccccagccaacaggccgcccttcacctgcacctcctgctgtcccacct
gctgcctcacctgtgatgccaccacaaacccagtccccagggcagcccgcccagcctgct
ccattggtgcccttgcaccagaaacagagccgtatcacccccatacagaagccccgtggg
ctggaccctgtggagatcctacaggagcgagagtacaggttgcaggctcgaatcgcacat
cgaattcaggaacttgaaaatcttcctgggtctctggctggggacctgcgaaccaaagca
accatcgaactcaaggcccttaggttgctgaacttccagaggcagctgcgtcaggaggtg
gtggtatgcatgcgcagagacacagccctagagacagccctcaatgccaaggcctacaag
cgcagcaaacggcagtcattgcgggaggcccgcatcactgaaaagctggagaagcagcag
aagattgagcaggagcgcaagcgccgccagaagcaccaggagtatctcaacagcatcctg
cagcatgccaaggacttcagggagtatcacaggtcagtcacaggcaaactccagaaactc
accaaggctgtggccacctaccatgcaaatactgagcgggagcagaagaaagaaaacgag
cgcatcgagaaggagcgaatgcggaggctcatggctgaagatgaggagggctaccgcaag
ctcatcgaccagaagaaggacaaacgcttggcctacctcctgcagcagacggacgagtac
gtggccaacctcacagagttggtacggcagcacaaagctgctcaggttgccaaggagaag
aagaagaaaaagaaaaagaagaaggcagaaaatgctgaaggacagacacctgctattgga
ccagatggtgagcctctggatgagaccagccagatgagcgacctccctgtgaaggtgatc
catgtagagagcggcaagatcctcacgggcacagatgccccaaaagctgggcagctggaa
gcctggcttgagatgaacccggggtatgaagtagctcccaggtcagatagtgaagaaagt
ggctctgaagaggaggaggaggaggaggaggaggagcagcctcagcctgcacagcccccc
acactgcctgtggaggagaagaagaagattccagacccagacagcgatgatgtctctgag
gtggacgcgcgacacattattgagaacgccaagcaagatgtggacgatgagtacggtgtg
tcccaggcccttgctcgtggactgcagtcctactatgctgtggcccatgctgtcacagag
agagtagacaagcagtcagctctcatggtcaacggtgtcctcaaacagtaccagatcaag
ggcttggagtggctggtgtccctgtataacaacaacctgaatggcatcctggctgatgag
atggggctgggaaagaccatccaaaccatcgcgctcatcacatacctcatggagcacaag
cgcatcaacgggcccttcctcatcattgtgcctctctcgacgctgtcaaactgggcatat
gaatttgacaagtgggccccttcagtggtcaaggtttcctataagggctctcctgcggca
agacgagcttttgtcccccagcttcgcagtgggaagttcaatgtcttgttgaccacctat
gagtatatcatcaaagacaaacatatcctggccaagatccgctggaagtacatgattgtg
gacgaaggccaccgcatgaagaaccaccactgtaaactgacacaggtcctcaacacacac
tatgtggcccctcggcgcctgcttctcacaggcacgcccctgcagaacaagctacctgag
ctctgggcactgcttaacttcctgctgcccaccatcttcaagagctgcagcaccttcgaa
cagtggttcaacgcaccctttgccatgacaggagagaaggtggacctgaatgaagaggag
accatcctcatcatccgtcgcctacacaaggtgctgcggcccttcctgctgcggaggctc
aagaaggaagttgaagcccagctacctgagaaggtggaatatgtcatcaaatgtgacatg
tcagccctgcagcgtgtgctctaccgtcacatgcaggccaaaggtgtgctactgacagat
ggctccgagaaggacaagaagggcaaaggtggcaccaagacactgatgaacactatcatg
cagctgcgcaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttct
gagcacttggggttcaccggcggcatcgtgcaaggattggacctgtaccgtgcctcaggg
aaatttgaacttcttgatagaattctacccaaactccgtgcaaccaaccataaagtgcta
ctcttctgccaaatgacctcccttatgactatcatggaagactactttgcataccgtggc
ttcaaatacctcaggcttgatggaaccacaaaagcagaggaccggggcatgctgctaaaa
acctttaatgagcctggctctgagtacttcattttcctgctcagtacccgtgccgggggg
ctgggtctcaatctgcagtcagctgacactgtgatcatctttgacagtgactggaatccc
caccaggacctgcaagcacaggatcgcgcccatcgaattgggcagcagaatgaggtacgg
gtgctccgcctgtgcaccgttaacagtgtggaggagaagatcctggccgctgccaaatac
aaactcaatgtggaccagaaggttatccaggctggcatgttcgaccagaagtcatccagc
catgagcggcgagcctttctgcaggccatcctggagcatgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagatgaggtacctgatgatgaa
accgtcaaccagatgattgcccggcatgaagaagagtttgacctctttatgcgcatggac
ttggatcgcagacgtgaagaggcccgcaaccccaagcggaagccacgcctgatggaagag
gatgagctgccatcctggatcatcaaggatgatgctgaggtagagcggctgacatgtgag
gaagaggaagagaagatgtttggccgtggttcccgtcaccgcaaggaggtggactacagt
gactcactgacagagaagcagtggctcaagaccctgaaggctatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcctcgcgcaagcgcaagcgggacagc
gaggccggctcctccaccccgaccacaagcacccgcagccgtgacaaagatgatgacagc
aagaagcagaagaagcgtggacggccacctgctgagaaactttccccaaacccacctaac
cttaccaagaaaatgaagaagattgtggatgccgtgatcaagtacaaggacagcagtagt
ggacgtcagctcagtgaggtgttcatccagctcccctctcgcaaggagcttcctgagtac
tatgagctcatccgaaaacctgtggacttcaagaagatcaaggaacgaatccgaaaccac
aagtaccgcagcctcaatgacctggagaaggacgtgatgctgctgtgtcagaatgctcag
acgttcaatctcgagggttccttgatctacgaggactccatcgtcctgcagtctgtcttc
accagcgtgcggcagaaaatcgagaaggaggacgacagcgaaggcgaggaaagtgaggag
gaagaggagggtgaggaggaaggctccgagtctgagtcccgttctgtcaaggtaaagatc
aagctgggccgaaaggagaaggcccaggaccgactgaagggggcccggcggcggccaagc
cggggatcccgggccaagccagttgtgagtgacgacgacagtgaggaggaacaggaagag
gaccgctcaggaagtggcagtgaggaggactga
DBGET
integrated database retrieval system
