Mesocricetus auratus (golden hamster): 101829637
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Entry
101829637 CDS
T08306
Symbol
Trim56
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maua04121
]
101829637 (Trim56)
Enzymes [BR:
maua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101829637 (Trim56)
Ubiquitin system [BR:
maua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101829637 (Trim56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
PML_CC
Motif
Other DBs
NCBI-GeneID:
101829637
NCBI-ProteinID:
XP_005080459
UniProt:
A0A1U8C9Q6
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MVSNISSPTLLEALSSDFLACKICLEQLHTPKTLPCLHTYCQDCLAQLDVGGRVRCPECR
ETVPVPPEGVAAFKTNFFVNGLLDLVKARAPGDVHSGKPACALCPLVGGKSSGGPATARC
LDCADDLCQACADGHRCSRQTHKHRVVDLVGYRAGWYDEEARERQASQCPQHPGEALCFL
CQPCSQLLCKDCRLGPHLDHPCLPLAEAVRSRKPGLEELLAGVDGNLVELEATRVAEKEA
LAQLREQAASVGAQVEEAAERILKSLLAQKQEVLGQLRALVETAEEATRERLTKIESQEQ
VAKAAAAFARRVLSLGLEAEILSLEGAITQRLRQLQESPWTPGPTRCVLPKLQLHPGLQD
KNCHLLRLSFEEPKQSRGDNEKLGAAGTQGGDEARSQAEERTRTVGKQGGAQSPCKDAAL
TPKEGKAQNPQEDDDVHVERGSRPNKKKKAKGRGRPPSREPSPILRPALEGAALLPRPVF
SWSFPTRMPGDKRSPRITGLCPYGPQEILVADEQNRVLKRFSLNGDYKGMVPVPEGCAPC
SVAALQNAVAFSANARLYLVSPEGAVQWRRSLSQTQSSHAVAAMPCGERVAVSVAGHVEV
YKEEGSLATRFIPGGKASRGQRALVFLTTSPQGNFVGSDWQQNSVVFCDGLGQVIWEYKG
PGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSFLGDFLTAYHGLEKPRVTTMVDG
KYLVVSLSNGTIHVFRVRFPDS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggtctccaacatctcctcccctactctgctcgaggctctgagcagcgacttcctggcc
tgtaaaatctgcctggagcagttgcacacgcccaagacactgccatgcctgcacacctat
tgccaagactgcctggcccagctggacgtgggcggccgggtccgctgccccgagtgtcgg
gagaccgtgcctgtgccgcccgagggtgtggccgccttcaagaccaacttcttcgtcaac
gggctcctggacctcgtcaaggccagggctcccggagacgtgcactcggggaagccagcc
tgcgcgctgtgccctctggtgggcggcaagagctccgggggccccgccaccgcccggtgc
ctggactgcgcggacgacctgtgccaggcctgcgccgacggccaccgctgctcccgccag
acccataagcaccgcgtggtcgacctggtgggctaccgggccgggtggtatgacgaggag
gctcgcgagcgccaggcgtcccagtgcccccagcaccccggggaggcgctctgcttcctg
tgccagccgtgctcgcagctgctctgcaaggactgccgcctgggaccccacctcgaccac
ccctgcctgcccctggccgaggcagtgcgctcccggaagccgggccttgaggagctgctg
gcgggggtggacggcaacctggtggagctggaggccacccgggtggccgagaaggaagcc
ttagcccagctgcgggagcaggcggccagtgtgggcgcgcaggtggaggaggccgccgaa
cgcatcctcaagtccctgctggcccagaagcaggaagtgctgggacagctccgggccctt
gtggagaccgccgaggaggccaccagggagaggctgaccaagatagagagccaggagcaa
gtggccaaggcggccgccgccttcgcccgccgagtgctcagcctgggcctggaggccgag
atcctgtcgctggaaggggccatcacgcagcgcctgcgccagctccaagagtctccctgg
acacccgggcccacccgctgcgtgctgcccaagctgcagctgcaccctgggctccaggac
aagaactgccacctgctgcgactctccttcgaggaaccaaaacagtcccggggggacaac
gagaagcttggagccgccggcacccaaggaggagatgaggctcgaagccaagcggaagag
agaaccaggacagtagggaagcagggcggagcccagtccccgtgcaaggatgcagccctg
actcccaaagaaggcaaagcccagaacccccaggaggatgacgacgtccatgtcgagagg
gggagcagacctaacaagaagaagaaggccaaagggaggggcaggcccccttctcgggag
cccagccccatcctcaggccagccctggagggtgcagccctcctcccccggcccgtgttt
tcctggagcttccccacgaggatgcccggcgacaaacgctcccctcgcatcaccgggctc
tgtccctacggcccccaggagatcctggtagcggatgagcagaacagggtcttgaagcgc
ttctcgctcaacggcgactacaagggcatggtgccggtccccgaaggctgtgccccgtgc
agcgtggccgccctgcagaacgcggtggctttctccgccaatgcgaggctctatctcgtc
agccccgagggggccgtccagtggcgcagatccctgagccaaacccagtccagccacgcc
gtggccgccatgccgtgtggagagcgggtggcggtcagcgtggctggccacgtggaggtg
tacaaggaggagggcagtctggccacccggtttatcccggggggcaaggctagccggggc
cagcgggccttggtgttcctgaccaccagcccccagggcaattttgtagggtcggattgg
cagcagaacagcgtggttttctgtgatggactaggccaggtgatctgggaatacaagggc
cccggcttacacggctgccagccaggttctgtgtctgtggataagaaaggctacatattt
ctgacccttcgagaggtgaacaaggtggtgatcctggaccccaaggggtcatttcttggt
gacttcctaacagcatatcatggcctggaaaagccccgggtaaccaccatggtcgatggc
aaatacctagtggtgtccctcagtaacgggactatccacgtgtttagggtcaggtttcct
gatagttaa
DBGET
integrated database retrieval system
