KEGG   Mesocricetus auratus (golden hamster): 101829905
Entry
101829905         CDS       T08306                                 
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua03030  DNA replication
maua03410  Base excision repair
maua03420  Nucleotide excision repair
maua03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:maua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101829905 (Rfc5)
   03410 Base excision repair
    101829905 (Rfc5)
   03420 Nucleotide excision repair
    101829905 (Rfc5)
   03430 Mismatch repair
    101829905 (Rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maua03032]
    101829905 (Rfc5)
   03036 Chromosome and associated proteins [BR:maua03036]
    101829905 (Rfc5)
   03400 DNA repair and recombination proteins [BR:maua03400]
    101829905 (Rfc5)
DNA replication proteins [BR:maua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101829905 (Rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101829905 (Rfc5)
Chromosome and associated proteins [BR:maua03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101829905 (Rfc5)
DNA repair and recombination proteins [BR:maua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101829905 (Rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101829905 (Rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 AAA_19 ATPase_2 AAA_30 TIP49 PhoH AAA_7 TniB DNAX_ATPase_lid nSTAND3 Mg_chelatase Thioredoxin_6 bpMoxR NPHP3_N AAA_25 AAA_3 AAA_28 ABC_tran
Other DBs
NCBI-GeneID: 101829905
NCBI-ProteinID: XP_040587627
UniProt: A0A3Q0D5V2
LinkDB
Position
Unknown
AA seq 338 aa
MAAVPPEQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHP
LKTDIANILDWMLNQDFTTAYRYIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLL
TKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVSEA
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcggcggtgcctccggagcagcggcccgcggcggcccgggcccggaacttgccctgg
gttgaaaagtaccggccacagaccctggccgatctcatttctcaccaggacattctgagt
accattcagaagttcatcagtgaggaccgcctgccacacctgcttctctatggccctccg
gggacaggaaagacatccaccatcctggcctgtgccaagcagctgtacaaagataaagaa
ttcggctccatggtcttggagctgaatgcctctgatgaccgaggaatagatattgtccgg
ggcccaatcctcagctttgccagcacaaggacaatcttcaagaaaggctttaagcttgtg
atcctggatgaagctgatgccatgactcaagatgcccagaacgccctgagacgagtgatt
gagaagttcacagaaaacaccaggttttgcctcatttgtaactatctgtccaagatcatc
cctgccttgcagtccaggtgcacaaggttccgatttggccccctgacgccagaactcatg
gttcctcgcctggagcatgtagtacaagaggagaatgttgatataagtgaagatggaatg
aaggccctcgtcactctgtccagtggggatatgcgcagggctctgaacattctgcagagt
accaacatggcctttgggaaggtgacagaagagaccgtgtacacctgcaccgggcacccc
ctaaagactgacatcgccaacattctggactggatgctgaatcaagacttcaccactgcc
tacagatacatcatggagctgaagactctgaagggcttggctctgcatgacatcctgacc
gaggttcacttgtttgtgcacagagttgactttccatcttcggttcggatacatttattg
accaaaatggcagacattgagtacagactctccgtcggcaccagtgagaagatacagctg
agctccctcattgctgcttttcaagtcaccagagacctgattgtctcagaggcctag

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