Mesocricetus auratus (golden hamster): 101829976
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Entry
101829976 CDS
T08306
Symbol
Scaf4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X2
KO
K13167
SR-related and CTD-associated factor 4
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maua03021
]
101829976 (Scaf4)
03041 Spliceosome [BR:
maua03041
]
101829976 (Scaf4)
Transcription machinery [BR:
maua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101829976 (Scaf4)
Spliceosome [BR:
maua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
101829976 (Scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101829976
NCBI-ProteinID:
XP_012971643
UniProt:
A0A1U8C787
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAVPVAENVTNNEGSPPPPVKVSSELAQAPTNSMPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAMEDTKKEDTAVTVAAPAAAPPPPSVTTP
AIAPAVPVPSATSPPPPQVPFGYPGDSMQQPAYTQHQSMDQFPPRMMGMQQDTVHHQVPL
PPNGQMPGFGLLSTTPFPPMPQPGMPQPGMPQPGMPQPGMAQPGMPQPGMPQPGIPPAPP
VQPTFQPTFQPQNEPLSQKPHQQEMEVEQPCVPEVKRHVPESRKSRSRSPKRRRSRSGSR
SRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQIKSETASVCSTTLWVG
QLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQK
SIKIAWALNKGIKADYKQYWDVELGVTYVPWDKVKPEELESFCEGGMLDSDTLNPEWKGI
PKKSENEVAQNGGAEASHTEPVSPVPKTLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVG
ALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSI
PPPHTPPINIPNSTIAGINEDTTKDLSIGNPIPTVVSGPRGNAESGDSAKMYGSAVPPAA
PANLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRF
PMMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPYPPHGPFVRPGGMPGLGGPGPGPGG
PEDRDGRQQQPQPQPPQQSQPQQPPPSQQPAPTQQQPQQPQQFRNDNRQQFNSGRDQERF
GRRSFGNRVENDRERYGNRNDDRENSSRERREWGRRSPDRDRHRDLEDRNRRSSGHRDRD
RDSRDRESRREKEDNRREKHELTDRAGGNKANEPPLSQVGGVDTVSELDKGEALAAVVKP
SEESPAEATSSVEPEKDSGSAAEAPR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagcttttttcacttatggatatgaaacctccc
atctctagagccaaaatgattctgatcactaaagctgctattaaagctattaagctttat
aagcatgttgttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtcattgattccattgtgagacagtctcgtcatcaatttggcactgat
aaagatgtttttgggccaagattctctaaaaatataactgctacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctaaatctttggcaaaaaaat
ggagtattcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gctgttcccgtagcagaaaatgtcaccaacaatgaagggtctcctccacccccagtaaaa
gtgtcttctgaactggcacaagcgcccacaaactccatgcctactgtgccacagctgccc
agctctgatgcctttgctgctgtggctcaactgtttcagaccactcagggccagcagctt
cagcagatccttcagacttttcaacagcctccaaaaccacagtctcccgcccttgacaat
gctgtgatggcccaggttcaggctatcacagctcagttaaagacagctcctacacaacca
cctgaacaaaaagccgctttccccccacctgaacaaaaaactgcatttgacaagaagctg
ctggataggttcgattatgatgatgagccagaagccatggaagacacaaagaaagaggac
accgctgtcactgttgcagcccctgcggctgcacctcccccgccctccgtgaccacacct
gctattgctcctgctgtgccggtaccctctgccacctcaccccctcctccacaggtgcca
tttggctatcctggggacagcatgcagcaaccagcctatacacagcatcaaagtatggac
cagtttccacctcggatgatggggatgcagcaggatacagtgcaccatcaggttccactt
cctcctaatggacagatgccaggatttgggcttctctctacaactccatttcctcctatg
ccgcagcctggcatgccgcagcctgggatgccgcagcctggcatgccgcagcctgggatg
gcacagcctggcatgccgcagcctggcatgccgcagcctgggattcctccagctcctcca
gtacaaccaactttccaacctacttttcagccacaaaatgagccgctttcacaaaagcca
caccagcaggaaatggaagtagaacagccttgtgtcccggaggttaagcgacacgttcct
gagagcagaaagtcaagatctaggtcaccaaaaaggagacgatctagatctggctctagg
tctcggagatcccgccacagacgatctcggtcccggtccagggacaggcgccggcactcg
cctcggtctcgatctcaagaaagaagggaccgagaaaaagagagggaacggcggcagaaa
ggcctccctcagatcaagtcagaaactgcaagtgtttgtagtaccacattgtgggtggga
cagctggacaaaaggactactcagcaagatgttgccagtctcttagaagagtttggtcca
attgaatcaattaatatgattcctcccaggggttgtgcctatattgttatggttcataga
caagatgcataccgtgccctgcagaaactgagccggggaaactataaagtgaaccaaaaa
tccataaagattgcctgggccttaaacaaaggaataaaggcagattataagcagtattgg
gatgttgaactgggtgttacttatgtcccgtgggacaaagtcaaacctgaggagctggag
agtttctgtgaaggcggaatgttggacagtgacacacttaacccagagtggaagggaatc
cccaagaagtctgaaaatgaagttgcccaaaatggaggtgcagaggcctcccacacggag
cccgtgtcgcctgtccctaagactttgcctgtgcctgtccctcctatccctgtccctgct
cctattacagtgccacctccacaggtcccacctcatcagccgggcccccctgtagttggt
gctctgcagccgcctgctttcacacctcccctaggaatccccccgccaggctttggccct
ggggttcctcctcctcctcctccaccaccatttttgcgcccaggattcaacccaatgcat
ttaccaccaggctttcttcctcctggacccccacctcctataactccaccagtgtccatt
cctcctcctcacaccccaccaataaacatcccaaactctactatcgctggtataaatgaa
gacactacaaaagacttatctattggaaatcccattccaacagtggtgtctgggcctaga
ggaaacgccgagtctggtgacagcgcgaaaatgtatggctctgctgtgccacctgctgca
cctgcgaatctgcccacccctcctgtaacccagcctgtttcacttcttggcactcaagga
gttgcacctggtcctgtgattgggctccaggcaccgtctactggtcttcttggtgccaga
cctggcctgatcccactgcagcgccccccagggatgcctccacctcacttgcagcggttt
cctatgatgccaccgcgccccatgccaccgcacatgatgcacagaggtccacctccagga
ccagggggctttgctatgcccccacctcatggaatgaaagggccctatccaccacacggc
ccctttgttaggcctggcggaatgccagggcttgggggcccagggccaggcccaggagga
ccagaagacagagatggaaggcagcagcagccgcagccgcagccaccacaacagtcacag
ccacagcagccaccaccgtcacagcagccagcgccaacacagcagcagccgcagcagcct
cagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaaggttt
ggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccggaat
gatgatagagagaatagtagccgtgagcggagagagtggggaagaaggagccctgaccgg
gacagacacagagacttggaagacagaaatagacgctctagtgggcatcgggacagagac
agggattccagagatagagagtcccgtagagagaaggaagacaaccgaagggagaaacac
gagctgacagacagggcgggcgggaataaagccaatgaacctccccttagccaagtggga
ggcgtagacactgtttcagaacttgacaagggggaggccttggccgcagtggtaaaacct
tccgaagagtcacctgctgaggctacctcatccgttgaacccgagaaggattctggctca
gcagcagaggctcctcgctag
DBGET
integrated database retrieval system
