Mesocricetus auratus (golden hamster): 101830681
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Entry
101830681 CDS
T08306
Symbol
Htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua05016
Huntington disease
maua05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101830681 (Htt)
05022 Pathways of neurodegeneration - multiple diseases
101830681 (Htt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101830681 (Htt)
04131 Membrane trafficking [BR:
maua04131
]
101830681 (Htt)
03029 Mitochondrial biogenesis [BR:
maua03029
]
101830681 (Htt)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101830681 (Htt)
Membrane trafficking [BR:
maua04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101830681 (Htt)
Mitochondrial biogenesis [BR:
maua03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
101830681 (Htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
101830681
NCBI-ProteinID:
XP_040602884
UniProt:
A0ABM2XJF0
LinkDB
All DBs
Position
Unknown
AA seq
3122 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQPPPPPPPPQPPQPPPQGQAPPLAPPPPPLPGPA
EEPLPRPKKELSATKKDRVSHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAES
DVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQK
CRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKS
SSPTVRRTAAGSAVSICQHSRRTQYFYNWLLNVLLGLLVPVEEEHSTLLILGVLLTLRCL
VPLLQQQVKDTSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHHTQHQDHNVVTGALELLQ
QLFRTPPPELLQALTTPGGLGQLTVVQEEARGRGRSGSIVELLAGGGSSCSPVLSRKQKG
KVLLGEEEALEDDSESRSDVSSSAFAASVKSEIGGELAASSGVSTPGSVSHDIITEQPRS
QHTLQADSVDLSGCDLTSAATDGDEEDILSHSSSQFSAVPSDPAMDLNDGTQASSPISDS
SQTTTEGPDSAVTPSDSSEIVLDSADSQYLGMHIGQPPEEEEEEAAAAGVLSSEVSDVFR
NSSLALQQAHLLERMGHSRQPSDSSIDKFVSRDEVAEASDPESKPCRIKGDIGQPNDDDS
APLVHCVRLLSASFLLTGGKKALVPDRDVRVSVKALALSCIGAAVALHPESFFSKLYKVP
LDTMEGAEEQYVSDILNYIDHGDPQVRGATAILCGTLVYSILSRSRLRVGDWLGTIRTLT
GNAFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCVLSLCSSSYSDLGLQLLIDMLPLKN
SSYWLVRTELLETLAEIDFRLVSFLEAKAESLHRGAHHYTGFLKLQERVLNNVIIYLLGD
EDPRVRHVAAASLTRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVS
TITRIYRGYSLLPSITDVTMENNLSRVVAAVSHELITSTTRALTFGCCEALCLLSAAFPV
CTWSLGWHCGVPPLSASDESRKSCTVGMASMILTLLSSAWFPLDLSAHQDALVLAGNLLA
ASAPKSLRSSWTSEEEANSAATRQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHVLDD
VTPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPMSPKKGGETSAASRQSDTSGP
VTASKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQIL
ELATLQDIGKCVEEVLGYLKSCFSREPTMATVCVQQLLKTLFGTNLASQFDGLSSNPSKS
QCRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVS
AQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQL
RVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIP
KIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRL
IQYHQVLEMFILVLQQCHKENEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTLF
EILAPSSLRPVDMLLRSMFITPSTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQE
LSFSPYLISCPVISRLREGDSNSTLGERSEGKQTKNLPEETFSRFLLQLVGILLEDIVTK
QLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTGDGCEGNFYTLESL
NARVRSMVPTHPALVLLWCQILLLINHTDHRWWAEVQQTPKRHSLSCTKSLNPQMSGEEE
DSSSAAQLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLINLSHEPPVQD
FISAIHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLG
THFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEHLQNSGLAQRHQRLYSL
LDRFRLSTVQDSLSPLPPVTSHPLDGDGHTSLETVSPDKNWYLQLVRSQCWTKSDSALLE
GAELVNRIPAEDMNDFMMSTEFNLSLLAPCLSLGMSEIAAGQKSPLFEAARGVTLARVTS
VIQQLPAVHQVFQPFLPAEPTAYWNKLNDLLGDATSYQSLTTLARALAQYLVVVSKVPAH
LHLPPEKEGDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQVPGLWGVLSSP
EYVTHACSLIHCVRFILEAIAVQPGDQLLGPESRSHTPRAVRKEGGDSNIQNPSYITSAC
EMVAEMVESLQSVLALGHKRNSNLPSFLTAVLKNIVISLARLPLVNSYTRVPPLVWKLGW
SPKPGGDFGTVFPEIPVEFLQEKEILTEFIYRINTLGWTSRTQFEETWATLLGVLVTQPL
VMEQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALD
TRFGRKLSVIRGIVEQEIQEMVSQRENTATHHSHQAWDPVPSLLPATTGALISHDKLLLQ
INSERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEADVPAPTSPPLSPVNSR
KHRAGVDIHSCSQFLLELYSRWILPSSAARKTPVILISEVVRSLLVVSDLFTERTQFEMM
YLTLTELRRVHPTEDEILIQYLVPATCKAAAVLGMDKTVAEPVSRLLESTLRSSHLPSQI
GALHGTLYVLECDLLDDTAKQLIPVVSDYLLSNLKGIAHCVNIHSQQHVLVMCATAFYLM
ENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDTESLV
KLSVDRVNVQSPHRAMAALGLMLTCMYTGKEKASPGRTSDPSPATPDSESVIVAMERVSV
LFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVF
QTLHSAGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFLVSASTSPWVSAILPHVISRM
GKLEHVDVNLFCLVATDFYRHQIEEEFDRRAFQSVFEVVAAPGSPYHRLLACLRNVHKVT
TC
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggaaaagctgatgaaggctttcgagtcgctcaagtcgttccagcagcag
cagcaacagcaacagcaacagccgccaccaccaccgccgccgcctcagccccctcagccg
ccgcctcaggggcaggcgccgccgcttgcaccgccaccaccgccgctgccgggtcctgcc
gaggagccgctgccccgaccaaagaaggaactctcagccaccaagaaggaccgtgtaagt
cattgtctgacaatatgtgaaaacatcgtggcacagtctctcagaaattctccagaattt
cagaaactcttgggcattgctatggagctgtttctgctgtgcagtgatgatgcagaatca
gatgtcaggatggtagctgatgagtgcctcaacaaagtcatcaaagctttgatggattct
aatcttccaaggctacagctagaactctataaggaaattaaaaagaatggtgctcctcga
agtttgcgtgcagcgctttggaggtttgctgagctggctcacctggttcgacctcaaaaa
tgtaggccttacctggtgaatctacttccatgcctgacccgaacaagcaagagacctgag
gagtcagttcaggagaccttggctgcagctgttcccaaaattatggcttcttttggaaat
tttgctaatgacaatgaaattaaggttctgttgaaagctttcatagcaaatctgaagtca
agttctcccactgtccgaaggacagcagctggctcagcagtgagcatctgccagcactcc
cggaggacacaatacttctacaattggctcctaaatgtgctcctaggtctgctggttccc
gtagaggaagaacattccactctcctgatccttggtgtgctactaacattgaggtgtctc
gtgcccttgctccagcagcaggtcaaggacacaagtctaaaaggcagctttggggtgaca
cggaaagaaatggaagtctctccttctacagagcagcttgtccaggtttatgaactgact
ttgcatcacacgcagcaccaagaccacaatgtggtgacaggggcactggagctcttgcag
cagctcttccgtactcctccccctgagctgctgcaagcactgaccacaccaggtggtctt
gggcagctcactgtggttcaagaggaggccaggggccgaggccgcagtgggagcattgtg
gaacttttagctggaggaggctcctcatgcagccctgttctctcaagaaagcaaaaaggc
aaagtgctcttaggagaagaagaagccttggaagatgactcagagtcccggtcagatgtc
agcagctcggcctttgcagcctctgtgaagagtgaaattggaggagaacttgctgcttct
tcaggtgtctccactcctggttctgtaagtcatgacatcatcactgagcagcctcggtcc
cagcacacacttcaagcagactctgtggatttgtcaggctgtgacttgaccagtgctgct
actgatggggatgaggaggacatcttgagccacagctccagccagttcagtgccgttcca
tctgaccctgccatggacctgaatgatgggacccaggcctcctcacccatcagtgacagc
tctcagaccaccactgaagggcctgattcagctgtgactccttctgacagctccgaaatt
gtattggatagtgctgacagccagtatttaggcatgcacataggacagccaccggaggag
gaagaggaggaggctgcggctgcaggtgtcctttccagtgaagtgtcagatgttttcaga
aattcttctctggcccttcaacaggcacacttattggagagaatgggtcatagtaggcaa
ccttctgacagcagtatagataagtttgtgtcaagagatgaagttgccgaagcgagtgac
ccagaaagcaagccttgccgaatcaaaggggacataggacagcctaatgatgatgattct
gctcctctggtccattgtgtccgccttttatctgcttcctttttgttaactgggggaaaa
aaagcactggttccagacagagatgtgagggtcagtgtgaaggccctggccctcagctgt
attggtgcagctgtggcccttcatccagaatctttcttcagcaaactgtataaagtacct
cttgacaccatggaaggtgctgaggaacagtatgtctctgacatcttgaactacatcgat
catggagacccacaggtccgaggagctactgccattctctgtggtaccctcgtctattcc
atcctcagcaggtcccggctccgtgttggtgactggctgggcaccattagaaccctgaca
ggaaatgcgttttctctggtggactgtattcctttgctacagaaaactttgaaggatgaa
tcttctgtcacttgcaagctggcttgtacagctgtgaggcactgtgtcctgagtctttgc
agcagcagctacagtgacttgggattgcaactgctcattgatatgttgcctctgaagaac
agctcctactggttggtgaggactgagctgctggaaacccttgcagagattgacttcagg
ctggtgagttttttggaggcaaaagcagaaagtttacaccgaggggctcatcattataca
gggtttttaaaactgcaagaacgagtgcttaataatgtgatcatttatttgcttggagat
gaagaccccagggtgcgacatgttgctgcagcatcgctaacaaggcttgtcccaaagctg
ttctataaatgtgatcaaggacaggctgatccagtagtggctgtagcaagagatcaaagc
agtgtttacctgaaactcctcatgcacgagacgcagccgccatcgcacttctctgtcagc
accataaccagaatctatagaggttatagtttactgccaagtataacagatgtcaccatg
gaaaacaacctctcaagagttgttgctgcagtttctcacgaactcattacatcaactacc
cgggcgctcacgttcggatgttgtgaagccttgtgtcttctttcagcagccttcccagtt
tgtacttggagtttaggttggcattgtggagtgcccccactgagtgcctctgatgagtcc
aggaagagctgcactgttgggatggcctccatgattctcaccttgctttcatcagcttgg
ttcccattggatctctcagcccatcaggatgccttggttttggctggaaacttgcttgcg
gccagtgcccccaagtctctgagaagctcttggacctccgaagaagaagccaattctgca
gctaccagacaggaggaagtttggcctgctctgggggaccggacactggtgcccatggtg
gaacagctgttctctcacctgctgaaggtgatcaatatctgtgctcatgtcttggatgat
gtgacccctggaccagcaatcaaggcagctttgccttcgctaacaaaccccccttctcta
agtcctattcgacggaaagggaaggaaaaagaaccaggagaacaagcttctgctccgatg
agtcctaagaaaggtggtgagaccagtgcagcctctcgacaatcagacacctcaggacct
gtcacagcaagtaaatcgtcttcactggggagtttctaccatctcccttcctacctcaaa
ctgcatgatgtcctgaaagccactcatgccaactataaggtcaccttagatcttcagaac
agcactgaaaagtttgggggattcctgcgctctgccttggacgtcctctctcagatacta
gagctggcaacactgcaggacattggaaagtgtgttgaagaggtccttggatatctgaaa
tcctgctttagtcgagaaccaacgatggcaactgtctgtgttcagcagctattgaagact
ctctttgggacaaacttggcctcccagtttgatggcttatcttccaaccccagcaagtct
cagtgccgagcacaacgccttggctcttccagtgtgaggccaggcttgtatcactactgc
ttcatggcaccgtacacgcacttcacacaggccttggctgatgccagcctgaggaacatg
gtgcaggcggagcaggagcatgatgcctcagggtggtttgatgtactccagaaagtgtct
gcccaattgaagacgaacctcacaagcgtcacaaagaaccgtgcagataagaatgctatt
cacaatcacattagattatttgagcctcttgttataaaagcgttgaagcagtataccaca
acaacatctgtacagttgcagaagcaggttttggatttgctggcacagctggttcagcta
cgggtcaattattgtctgctggattcagatcaggtgttcatcggttttgtgctgaagcag
tttgagtacattgaagtgggccagttcagggaatcagaggcaattattccaaatatattt
ttcttcctggtattattgtcttatgaacgctaccattcaaaacaaatcattggaattcct
aaaatcatccagctgtgtgatggcatcatggccagtggaaggaaggctgttacacatgcc
atacctgctctgcagcccattgtccatgacctgtttgtgttaagaggaacaaataaagct
gatgctggaaaagagcttgaaacccagaaggaggtggtggtgtcgatgctgttaagactc
atccagtaccatcaggtgctggagatgttcatccttgtcctgcagcagtgccacaaggag
aatgaggacaagtggaaacggctgtctcggcaggttgcagacatcatcctgcccatgtta
gccaagcagcagatgcacattgattctcatgaagcccttggagtgttaaataccttgttt
gagattctggctccttcctccctacgtcctgtggacatgcttttgcggagtatgttcatc
actccaagcacaatggcatctgtaagcactgtgcagctgtggatatctggaatcctagcc
attctgagggttctcatttcccagtcaacagaagatattgttctttctcgtattcaggaa
ctctccttctctccatatttaatctcttgtccagtaattagcaggttaagggaaggagac
agtaattcaacactaggagaacgcagtgaagggaaacaaacaaagaatttgccagaagaa
acattctcaaggtttcttttgcagcttgttggtattcttttagaagacattgttacaaag
cagctcaaagtggaaatgagtgaacagcagcatacattctactgccaagaactaggcaca
ctgctcatgtgtctgatccacatcttcaaatctggaatgttccggagaatcacggcagct
gccactagactcttcactggtgatggctgtgaaggcaacttctatactctagagagcctg
aatgcacgggtgcgatccatggtgcccacacacccagctctggtattgctctggtgtcag
atcctactgctcatcaaccacactgaccaccgatggtgggcagaggtgcagcagacaccc
aaaaggcacagtctgtcctgcacgaagtcacttaacccccagatgtctggtgaagaggag
gattctagttcagcagctcaacttggaatgtgcaatagagaaatagtgcgaagaggggcc
cttattctcttctgtgattatgtctgtcagaatcttcatgactcagaacacttaacgtgg
ctcattgtgaatcacattcaagatctgatcaacctgtcccatgagcctccagtacaagac
tttattagtgccattcatcgtaattctgcggctagtggccttttcatccaggcaattcag
tctcgttgtgaaaatctttcaactccaaccactctgaagaaaacacttcaatgcttagaa
ggcatccatctcagccagtctggtgctgtgcttacgctatatgtggacaggctcctggga
actcacttccgtgcgctggctcgcatggtcgacactctggcctgtcgccgggtagaaatg
cttttggctgcaaatttacagagcagtatggcccagttgccagtggaggaactgaacaga
atccaggagcacctccagaatagtggacttgcacaaagacaccaaaggctctattccctg
ctggacaggttccgactctctaccgtgcaggactcacttagccctttgcccccagtcact
tcccacccactggatggggatgggcacacatctctggaaacagtgagtccagacaaaaac
tggtacctccagcttgtaagatcccagtgttggaccaaatcagattctgcactgctggaa
ggtgcagagttggtgaatcgcatccctgctgaagacatgaatgacttcatgatgagcacg
gagttcaacctaagccttttggctccctgcttaagccttggcatgagtgagattgctgct
ggccagaagagtcctctttttgaagcagcccgtggagtgactctagcccgggtgaccagt
gttattcagcagcttcctgctgtccatcaagtcttccagcctttcctgcctgcagagcca
acagcctactggaacaagttgaatgatctgcttggtgatgctacatcataccagtctctg
accacacttgcccgtgccctggcacaatacctggtggtggtctccaaagtgcctgctcat
ttgcaccttccccctgagaaggagggggacacagtgaagtttgtggtaatgacacttgag
gctttgtcatggcatttgatccatgagcagatcccactgagtctggacctccaagccggg
ctagactgctgctgcctggcactacaggtgcctggcctctggggagtgctgtcctcccca
gagtatgtgacccatgcctgttccctgatccattgtgtgagattcatcctggaagccatt
gcagtgcagcctggtgaccagcttcttggtccagaaagcaggtcacatactccaagggct
gtcagaaaggaaggaggagactcaaacatacaaaatcccagttacatcacttcagcctgc
gagatggtagcagagatggtggaatccctgcagtcagtgctggccttgggccacaagagg
aacagcaacttgccttcatttctcacggcagtgctaaagaatattgtcatcagtctggca
cgtcttcccctagtcaacagctatacacgtgtgccccctctggtatggaaacttgggtgg
tcacccaagcctggaggggactttggcacagtgttccctgagatccctgtagaattcctc
caggagaaggagatcctaacggaattcatctatcgcatcaacaccctagggtggaccagt
cgtacccagtttgaagaaacttgggccaccctccttggtgtcctggtgactcagccccta
gtgatggaacaggaggagagccctccagaggaagacacagaaaggacccagatccatgtc
ctggctgtgcaggccatcacctctttagtgctcagtgcaatgactgtgcctgtggctggc
aatccagctgtaagctgcttggaacaacagccccggaacaagcccctgaaggctctcgac
accagatttggaagaaagttgagtgtgatcagagggattgtagaacaagagatccaagaa
atggtttcccagagagagaatactgccactcaccattctcaccaggcatgggatcctgtc
ccttctcttttgccagctactacaggtgccctcatcagccatgacaagctactgctgcag
atcaactcagagcgggagctaggcaacatgagctacaagttgggccaggtatcaatacac
tctgtgtggctggggaacaacatcacacctctgagagaggaggaatgggatgaagaggag
gaggaagaggctgatgtccctgcaccaacatcgccacctttgtctccagtcaattccaga
aaacatcgtgctggggttgatattcactcctgttcgcagtttctgcttgaattgtacagc
cgctggatcctgccatccagtgcagccagaaagacccctgtcatcctgatcagtgaagtg
gttcgatctcttctcgtggtgtcagacttattcactgaacgcacccagtttgaaatgatg
tatctaacactgacagaactacggagagtgcaccctacagaagatgaaatcctcattcag
tacctagtgcctgccacttgtaaggcagctgctgtccttggtatggacaaaactgtagca
gaaccagtcagccgcctactggagagcacactcaggagcagccaccttcccagccagatc
ggagccctgcatggcaccctctatgtgttggagtgtgacctcttggatgacactgcaaag
cagctcattccagtcgttagtgactatctgctgtccaacctcaaaggaatagcccactgc
gtgaacattcacagccagcagcacgtgctggtgatgtgcgccactgcattctatctgatg
gaaaactaccctctggatgtggggccagaattttcagcatctgtgatacagatgtgtgga
gtgatgctgtctggaagtgaggaatccaccccctccatcatctaccactgtgccctccgg
ggtctggagcgtctcctgctgtctgagcagctctctcggttagatacagagtctttggtc
aagctaagcgtggacagagtgaatgtacaaagcccacaccgagccatggcagccctaggc
ctgatgctcacctgcatgtacacaggaaaagaaaaagctagtccaggcagaacctctgac
cccagccctgctacacctgacagtgagtctgtgatcgttgctatggagcgggtatctgtt
ctctttgataggatccgcaaagggtttccttgtgaagccagggtcgtggcaaggatcctg
cctcagttcctggatgacttcttcccacctcaagatgtcatgaacaaagtcattggagag
tttctgtccaaccagcagccatacccacagttcatggccactgtagtatacaaggttttt
cagactctgcacagtgctggacagtcatccatggtcagggactgggtcatgctatccctg
tccaacttcacacaaagaactccagttgccatggccatgtggagcctatcctgcttcctc
gtcagcgcatctaccagcccatgggtatcagcgatccttccacatgtcatcagcaggatg
ggcaaactggagcatgtagatgtgaaccttttctgcctggttgccacagacttctacaga
caccagatagaggaggaattcgaccgcagggctttccagtctgtgtttgaggtggtggca
gcaccaggaagtccataccaccggctgcttgcttgtttgcgaaatgtccacaaggtcacc
acctgctga
DBGET
integrated database retrieval system
