Mesocricetus auratus (golden hamster): 101831448
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Entry
101831448 CDS
T08306
Symbol
Vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04140
Autophagy - animal
maua04148
Efferocytosis
maua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101831448 (Vps39)
04148 Efferocytosis
101831448 (Vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101831448 (Vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maua04131
]
101831448 (Vps39)
Membrane trafficking [BR:
maua04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101831448 (Vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
KCTD11_21_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
101831448
NCBI-ProteinID:
XP_005064756
UniProt:
A0A1U7QEZ1
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTETGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTLEPRLLVQSTELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPTLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIENFKGLA
IPYLEHVIHVWEETGSRFHNCLIQLYCEKVQSLMKDYLLSLPTGKSPVPAGEEMGELGEY
RQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAK
EYCHKHYDQNKEGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYS
KLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNSADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccggtgccgatcctggaaaagcttcccctgcaaatcgactgc
ctggctgcctgggaggaatggcttcttgttggaaccaaacaaggacatctccttctttac
aggattcggaaggatgttgtgccagcagatgtagcctcacctgaaagtggcagttgtaac
aggtttgaggtaacactagagaagtccaataagaacttttccaaaaagatccagcagatc
catgtggtttcccagtttaagattctagtcagcttgttagaaaacaacatttatgtccat
gacttgctgacatttcaacaaatcactacagtttcaaaagccaagggggcgtcattgttc
acctgtgacctccagcacactgagaccggtgaggaggtgttgcggatgtgtgtggccgtg
agaaagaagctgcagctgtacttctggaaggacagggaattccatgaactgcagggggac
tttagtgtacctgatgtgcccaagtccatggcatggtgtgaaaattctatctgtgttggc
ttcaagagagactactacctgatcagggtggatggaaaggggtccatcaaagagctcttc
ccaacaggaaagcagctggagcccttggtcgcgcctctggcagatggaaaagtggccgtg
ggtcaagatgatctcactgtggtactcaacgaggaaggcatctgcacacagaaatgcgcc
ctgaactggacagacatcccagtggccatggagcaccagcccccatacatcattgcagtg
ttgccccgatacgtggagatccgaaccctcgaaccaaggcttctggttcagagcactgag
ttgcaaaggccccgcttcattacctcagggggatcaaacattatctatgtggccagcaat
cattttgtttggagactcattcctgtccccatggcaactcaaatccaacagcttctccag
gacaagcagtttgaactggctctgcaactcgcagaaatgaaagatgactcagacagtgag
aagcagcagcaaatccatcacattaagaacttgtatgccttcaacctcttctgccagaag
cgctttgatgaatccatgcaggtctttgctaaacttggcacagatcccacccatgtgatg
ggcttgtaccctgacctgctccccacggactacaggaagcagctgcagtaccccaaccca
ctgcccacactctctggtgccgaattggagaaggctcacttagctctcattgactacctg
acacagaaacggagtcagttggtaaagaagctgaatgactcggatcatcagtccagcacc
tccccactcatggaaggcactcccaccatcaagtccaagaagaagttactacagatcatc
gacaccactctgctcaagtgctaccttcatacaaatgtggccctggtggctcctttgcta
cgcctggagaacaaccactgtcacattgaggaaagtgagcatgtgctaaagaaggctcac
aagtacagtgaactcatcatcctgtacgagaagaaggggcttcatgagaaagctctgcag
gtgctagtggaccagtccaagaaagcaaactcacctctgaaaggccacgagaggacggtg
cagtatctgcagcacttgggcacagaaaacctacatttgattttttcctactcggtttgg
gtgttgagagacttcccagaagatggcctgaagatattcaccgaagacctcccggaggtg
gagtctctgccacgagatcgagtgctcaacttcttaatagagaatttcaagggtctggcc
attccttacctggagcatgtcatccacgtgtgggaggagacgggctcacggttccacaac
tgtctgatccagctgtactgtgagaaagtacagagtctgatgaaagactaccttctgtcc
ctgcccacaggcaaaagtcccgtccctgctggagaggaaatgggcgagctgggagaatac
cgacagaaactgctcatgttcttggagatttccagctactatgacccaggccggctcatc
tgtgattttccctttgatggcctcttagaagaaagagctctcctgttgggacgaatgggg
aagcacgaacaagccctcttcatctatgtccacatcttgaaggacacaaagatggctaag
gagtactgccacaaacactacgaccaaaacaaagaaggcaacaaagatgtatatttgtcc
ctgcttcggatgtacctgtcaccccccagcatccactgcctggggccaatcaaactggag
ctgctggagccacaggccaacctccaggctgccctgcaggtcctggagctgcactacagc
aaattagataccaccaaggcgatcaaccttctaccggcaaacactcagatcaatgacata
cgcatctttttagaaaaggtcttggaagaaaatgcacaaaagaaacgattcaatcaagtg
ctcaagaaccttctccatgccgagttcctgagagttcaggaagagcggattttacaccag
caggtgaagtgcatcatcaccgaggagaaagtgtgcatggtgtgcaagaagaagattggg
aacagtgcatttgcaagatacccaaatggagtggttgtgcactacttctgttccaaagag
gtcaactcagccgacacctga
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