Mesocricetus auratus (golden hamster): 101832553
Help
Entry
101832553 CDS
T08306
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X7
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101832553 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101832553 (Edc4)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101832553 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
101832553 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
DUF445
WDR55
Motif
Other DBs
NCBI-GeneID:
101832553
NCBI-ProteinID:
XP_005076364
UniProt:
A0A1U7QLB1
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGSNAESRPSSAYNGDLNGLLVPDPLSSGDGNST
SKPGVRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKIQ
PVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVAD
LAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTPLNHFRRIIWCPFI
PEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNSWPVDVSQIKQGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYL
ILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAE
EENDSLGAESSHGASAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTAH
EDFTFGESRPELGSEGLASGAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMTP
TASLQQISASPSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPRPPEELTLSPK
LQLDGSLTINSSSSLQASPRSLLPGLLPGPADKLTPKGPGQVSAASALSLDLQEVESLGL
PQASSSRTRSPDVISSASTALSQDIPEIASEALSRGFGPSVPEGLIEPDSMASAASALHL
LSPRPRQGPELGSQLGLDGGPGDGDRHNTPSLLEAALTQEVATPDSQVWPTAPDITRETC
STLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASASGGFGSK
IPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDRDSAVGSRLTDHQVAEPPEDWPALIWQQQ
RELAELWHNQEELLQRLCAQLEGLQNTVADHVERALETRHEQEQRRLERALAEEQQRGGQ
LQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVE
GSMKENISKLLKSKNVTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN
DSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSSVRA
EVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAH
LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVL
LSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQADPH
NSLGKAARRLSLMLHGLATPSLP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcatctgcgagacatcctc
aagctggaccggcccgccggaggctccaatgcagagagccggccatccagtgcctacaat
ggagacctcaatgggctcctggttccggacccactcagctcaggtgatggtaactcaaca
agcaaacctggtgtacggaccatgccacctattaacctgcaggaaaagcaggtcatttgc
ctctctggagatgacagctccacttgcattgggattttggccaaggaggtggaaattgta
gccagcagtgattctagcatttccagcaaggcacgggggagcaacaaggtgaaaatccag
cctgtcgccaagtatgactgggagcaaaaatactactatggcaacctgattgcagtgtct
aactccttcttggcatatgccattagggctgccaacaacggctcagcaatggtacgtgtg
attagtgtcagcacttcagagcggaccctgctcaaaggtttcacgggcagtgtggctgat
ctggccttcgcacacctcaactctccacagcttgcctgcctggatgaggctggcaatctt
tttgtgtggcgcttggctctggttaagggaaaaattcaagaagagattttagtccacatc
cgacagccagagggcacaccactgaaccacttccgaaggatcatctggtgccctttcatc
cctgaggaaagtgaggactgttgtgaggaaagtagccccacagtggccctgctgcatgaa
gaccgggctgaggtatgggacctggatatgctgcgctccagccataactcctggcctgtg
gatgtcagccaaatcaagcagggcttcattgtggtaaaaggccatagcacgtgcttaagt
gaaggagccctctctcctgatgggactgtcctggctactgcaagccatgacggctttgtc
aagttctggcaaatctacattgaaggtcaggatgaaccaaggtgtctgcatgaatggaag
cctcatgatggacggcccctttcttgcctcttattctgcgataaccataagaaacaggat
cctgaagtcccattctggaggttcctcattaccggcgctgaccagaatcgggaattgaag
atgtggtgcacggtgtcctggacttgcctgcaaaccattcgtttctccccagatatcttc
agctcagtgagcgtacctcccagcctcaaagtttgcttggacctctccgcagagtatctg
attcttagtgatgtgcagcgcaaggtcctgtatgtgatggagctgctgcagaaccaagac
gagggccgcgcttgctttagttccatctccgagttcctgctcacccaccccgtgctgagc
tttggcatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgctgag
gaggagaatgacagtctgggggctgagagttcccatggagctagtgccatggaatcagca
gctggtgtgcttatcaagctcttttgtgtgcatactaaggcactacaggatgtgcagatc
cgcttccaaccacagctgaaccctgatgtggtggctccactccctacccacactgctcac
gaggacttcacatttggagagtctcgacctgaactaggctctgaggggctagcttcaggt
gctcatgggtctcagcctgacctccgacgcatcgtggaactgcctgcgcccgcagacttc
ctcagtctgagcagtgagaccaagcctaagttgatgacacctgatgctttcatgacgccc
accgcttccctgcagcagatttctgcgtcccctagcagtagcagcagcagcagcagcagt
agcagcagcagtagcagcagcagcagcagctccctaacagctgtgtctgctgtgagtagc
tcctcagccatggacccctccttgcccaggccacctgaagagctgaccttgagtcccaag
ctgcagctggatggcagcctgacaataaacagcagcagcagcctgcaggcaagccctcga
agcctccttcctggcctgctccccggcccagctgacaaattgactcccaagggacccgga
caggtatctgctgcctctgcactgtccttggatttgcaagaagtggagtctctggggcta
ccccaggcttcctccagtcgcacccgttctcctgatgtaatctcttcagcatccactgcc
ctgtcccaggacatccctgaaatcgcatctgaggccttgtcccgtggttttggcccctct
gttcccgagggcctcattgagccagacagtatggcctcagctgcttcagcactacactta
ctgtctcctcggcccaggcaaggccctgaacttggctctcagcttggtctggatggaggc
cctggggatggggatcggcataataccccctccctactggaagcagccttgacccaggag
gttgcaacccctgacagtcaagtctggcctacagcacctgacattactcgggagacttgt
agtaccttggcagaaagccccaggaatggccttcaggaaaagcacaaaagcctggccttc
caccggccaccttaccacctgctgcagcagcacgacagtcaggacaccagtgctgagcaa
agtgaccacgatgatgaggttgccagcctcgcttctgcctcagggggctttggcagcaaa
attcctactccacggctgcctgccaaggattggaagaccaagggatcccctcggacttca
cccaaactcaagaggaaaagcaagaaggatgatagggattcagctgtgggatcccggctc
acagatcaccaggtggcagagcctcctgaggactggccagcattaatctggcagcagcaa
agagagctggcagagctatggcacaaccaagaagagctgctacagcgtctctgtgcccaa
cttgaaggcctacagaacactgtcgctgaccatgtggagcgtgccctggagacacggcat
gagcaagagcagcggcggctggaacgggcactggctgaggagcagcaacggggcgggcag
ctgcaggagcagctgacacagcagctgtcccaggcattgtcttcagctgtggctgggcgg
ctagagcgcagcataagggatgaaatcaagaagacggttcctccatgtgtctccagaagt
ctggagcctgtggcaggtcaactaagcaactccgtggcaaccaaacttacagcagtagaa
ggcagcatgaaagagaatatctctaagctactcaagtccaagaatgtgaccgatgccatt
gcccgagcagctgcagacactttacagggaccaatgcaggctgcctaccgggaagccttc
cagagtgtggtattaccagcttttgaaaagagttgccaggctatgttccagcaaatcaat
gacagctttaggctgggcacacaggaatatttgcagcagctagagagtcacatgaagagc
cggaaggcacgtgaacaggaagctagggagcctgtgctggcccagcttcggggcttggtc
agcacactgcagagtgccactgagcagatggcagccactgtgtctagcagtgttcgggcc
gaggtgcaacaccagctgcatgtggctgtgggcagcttgcaggagtcaattttagcacaa
gtacaacgcattgttaagggtgaagtaagtgtggcacttaaggagcagcaggccaccgtc
acttccagcatcatgcaggccatgcgttcagctgctggcacacctgttccttctgcccac
cttgactgccaggcccaacaagcccacatcctgcagttactgcagcagggccacctcaat
caggccttccagcaggcactgacagccgctgatctcaacctggtgctgtatgtgtgcgag
accgtggacccagcccaggtttttgggcagccaccctgtccactatcccagcctgtactc
ctttccctaatccagcagctggcatctgaccttggaactagaagtgacctcaagctcagc
tacttggaagaggctgtgatgcacctggaccacagtgatcccatcactcgagaccacatg
ggctctgtgatggcccaggtgcgccagaagctcttccagttcctgcaagctgatccacac
aactctcttggcaaagctgcccgtcgtctcagcctaatgctacatggccttgcgacccct
agcctcccttag
DBGET
integrated database retrieval system
