Mesocricetus auratus (golden hamster): 101832709
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Entry
101832709 CDS
T08306
Symbol
Ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101832709 (Ddx42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101832709 (Ddx42)
Enzymes [BR:
maua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101832709 (Ddx42)
Spliceosome [BR:
maua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101832709 (Ddx42)
Complex B
101832709 (Ddx42)
Complex C
U2 SnRNP specific factors
101832709 (Ddx42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
101832709
NCBI-ProteinID:
XP_040605878
UniProt:
A0A3Q0CJL7
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEAKLPQQSHSAFGAASSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENSDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KTGTSSAGASGWTSAGSLNSVPTNSTQQGHNSPDSPITSAAKNIPGFSSSGNISSAPVTY
PSVGAQGVNNTASGSNSREGIGGGNGKRERYTENRGGGRHSHGDGGNRHGDGGRHGDGYR
YPESSSRHTDGHRHGENRHGGSTGRHGESRGANDGRNGESRKEGFNRENRMDPKVDSSKI
DKVDSKSDKTPDGFAVPEPPKRKKSRWDS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccctggaactaagcgggggtttggctttggaggctttgcc
atcagtgctgggaaaaaggaggaagccaagctgccgcagcagtcccacagtgcctttggg
gcagccagctcttcttctggatttggaaagtctgctcccccacagcttccttctttctac
aagattggatctaaacgggccaactttgatgaagaaaatgcgtattttgaagatgaagaa
gaagactccagcaatgtggatttaccttacattcctgcagaaaactcacctacccgccag
cagttccattccaagcctgcagattctgacagtgatgatgatcccttagaggcgttcatg
gctgaagtggaggatcaggcggcaagagacatgaaaagacttgaagaaaaggacaaggaa
agaaaaaatgtaaagggtattcgagatgacattgaagaagaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggggtggttcaggaggaggaggaagacaat
ctggaatatgatagtgatggaaatccgattgcaccgtccaaaaaaattattgatcctctt
cctcccattgatcattcagagattgactatccaccatttgaaaaaaatttttacaatgaa
cacgaggagataaccaacctcactccacagcagttaatagacctgcggcataaactcaac
cttcgggtctctggcgctgcacctcctagaccaggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaagtctgagtacacacagccaactccaatacag
tgtcagggtgtgcctgtagcattaagtggtagagacatgattggtattgctaaaacaggc
agtgggaaaactgcagcctttatttggcccatgttgattcacataatggatcagaaggaa
ttggaaccaggagatggaccaatcgctgtgattgtgtgtcccactagggagctttgtcaa
cagatccatgcagaatgtaagcggtttgggaaagcatataatcttcgatcggtggcagta
tatggtggagggagcatgtgggagcaggccaaagcccttcaggaaggagccgagattgtt
gtgtgtaccccaggtcggctgattgatcatgtgaagaaaaaagctactaatcttcaaaga
gtctcttaccttgtgtttgatgaagccgatcggatgtttgacatgggatttgagtaccag
gttcggtccatagcaagtcatgtccgtcctgacagacagactctcctattcagtgcaact
tttcggaaaaagattgaaaaattggccagagacatcttgattgaccctattcgagtggta
cagggagacattggagaggcaaatgaagatgtgacacagattgtggagatactccattct
gggcctagtaaatggaactggcttacccggcgtctggtggagtttacttcttcagggagt
gtcctcctgtttgttactaaaaaagctaatgctgaagaactagccaataaccttaagcag
gagggtcataatcttggtctactccacggggacatggaccaaagtgaaagaaacaaggtc
atttcagattttaagaaaaaagacatccctgtcctggtggccactgatgttgcagcccgt
ggtctggacattccttcaattaagacagtcattaactatgatgtagcacgagatattgat
acccatactcatagaattggccgaacaggaagagctggtgagaagggtgtggcctatacc
ttactgaccccaaaggacagtaattttgccggtgaccttgtccggaacctcgaaggagcc
aaccaacatgtttccaaggaactcttagacctggcaatgcagaatgcctggtttcggaaa
tcccgcttcaagggagggaaaggcaaaaagctgaacattggtggaggaggcttaggctat
agagagcggcctgggctaggctccgagaattcggatcgaggaaataataacaatgtaatg
agcaattatgaagcctacaagccctccacaggagccatgggagataggctgacagcaatg
aaagcagcttttcagtcccagtacaagagtcactttgttgcagccagtttaagtaatcag
aagactggaacttcttctgctggggcaagtggatggactagtgcaggaagcttaaattct
gttccaactaattcaacacagcagggccataatagcccagatagccccatcaccagtgct
gccaagaacattccaggcttcagcagttctgggaatatcagcagtgccccagtgacctac
ccttctgttggagcccaaggagtcaacaacacagcttcagggagtaacagccgtgaaggg
attgggggtggcaatgggaagagagagagatatactgagaacaggggtggtggccgtcat
agtcatggagatggaggcaatcggcatggagatggtggtcgccatggagatggataccgt
tacccagaaagcagcagccgtcatactgatggccaccgacatggagagaacaggcatgga
ggaagtactggcagacatggagagagccggggtgcgaatgatggtaggaatggagaaagc
aggaaagaaggctttaatcgtgaaaacaggatggaccccaaggtggacagcagcaagata
gacaaagtggacagcaagtcagataagacgcctgatggttttgctgttccagagccaccc
aaacgtaagaaaagtcgatgggacagttag
DBGET
integrated database retrieval system
