Mesocricetus auratus (golden hamster): 101833244
Help
Entry
101833244 CDS
T08306
Symbol
Cnot6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101833244 (Cnot6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101833244 (Cnot6)
Enzymes [BR:
maua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101833244 (Cnot6)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101833244 (Cnot6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101833244 (Cnot6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_6
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101833244
NCBI-ProteinID:
XP_005071931
UniProt:
A0A1U7QE06
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSCIPSDIAKLHNLVYLDLSHNQIQSLPAELGNMVSLRELHLNYNQLRVLPFELGKLF
QLQTLSLKGNPLTQDILNLCLEPDGTRRLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLKSTVLGECGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcctgtattccttcagacattgccaagcttcacaatctggtatatctggac
ctgtcccataaccaaatccagagtttaccggcagaactcggaaacatggtatcactcagg
gagctccatttaaattacaaccagttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaagcctgaaaggaaatccacttacccaagatatattgaacctctgt
ctggaacctgatggaacaagaaggctactgaactacttgctcgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggatcatgttacaagagcca
gacagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctattgtccatcgtgggcacttaattgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatattataagtcttcaggag
gttgaaacggagcagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagccctaagtctagagctaggacaatgtcggaacaagaaagaaagcatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaaccaactagcaatggcgaattcagaagggtctgaagctatgctgaatagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaaaccacatctgggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactcggatgtgaagttggtacaaactatgatgttcctc
tcagaagtgaagaatattattgataaagcctctcggagcctcaaatccactgtattggga
gaatgtggaactattccgcttgtgttatgtgcagatctgaattctttgccagactctggt
gttgtagagtacttgagcactggcggggtagaaacaaatcataaggactttaaggaactg
aggtacaatgaaagtcttacaaacttcagctgtaatgggaagaatggtatgaccaatgga
aggatcactcatggtttcaagttaaagagtgcctatgagaatggcctgatgccttacacg
aattacacatttgatttcaagggtataattgactacatcttctattctaaacctcagctg
aataccttagccatcctgggacctctggaccaccattggctggttgaaaataatatcagc
ggctgcccacatcctcttattccctctgaccacttctcactttttgcacaattggagctc
ttactgcctttcctgccccaagttaatggcattcaccttcctggcaggaggtag
DBGET
integrated database retrieval system
