Mesocricetus auratus (golden hamster): 101836628
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Entry
101836628 CDS
T08306
Symbol
Lig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101836628 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maua03400
]
101836628 (Lig3)
Enzymes [BR:
maua01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101836628 (Lig3)
DNA repair and recombination proteins [BR:
maua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101836628 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
101836628
NCBI-ProteinID:
XP_005077012
UniProt:
A0A1U7QDV8
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MTLAFKILFPRKKLCLFPEQKHWPVIRQFSQWSETDLRGCCLLQRRKPALSFQGGHLRPR
ATHLVFFPGSHVGLCTGPCEMAEQRFCVDYAKRGTAGCKKCKEKIIKGVCRIGKVVPNPF
SESGGDMKEWYHIKCIFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQLIADLSSK
AAGTPKKKTAVQGKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAAKTNNSEQGSSSPAPK
TSLSASKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSTGDGFHGDVYLT
VKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPP
AAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGA
KHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVKKDPGRRRALSVQASLMTPVQPMLA
EACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKVAHFKDYIP
KAFPGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLM
DRPLCERRKFLHDNMVEIQNRIMFSEMKQVTKASDLADMINRVIREGLEGLVLKDVKGTY
EPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPDSQKWCTV
TKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAAVWEITG
AEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFAVVAGEEG
NSATGDSSGENEGTAGSAAAPKAPPSKSYSGKKAEQKLNNPNSRGGNKVSPKPSPMKPGD
KLAVKSSPVKVGVKRKADDETQCPTKVLLDVFTGVRLYLPPSTPDFRQLKRYFVAFNGDL
VQEFDMASATHVLGNRDDNTEAQLVSPEWIWACIRKRRLIAPC
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccgagaaaaaaactgtgcctgttcccagaacag
aagcattggcctgtcataagacagttcagccagtggtcagaaacagaccttcgtgggtgc
tgcctcctccagagaagaaagcctgccctatctttccagggaggtcatctaagaccacgt
gccacccaccttgttttcttcccagggtcgcatgtgggactctgtactggcccctgtgag
atggcggagcagcggttctgtgtggactatgccaagaggggtacagctggctgcaagaaa
tgcaaggagaagattataaagggcgtatgccgcattggcaaagtggtgcccaatcccttc
tcagagtctgggggcgatatgaaagagtggtaccatattaagtgcatatttgagaaactg
gagcgggctcgggctaccacaaaaaaaatcgaagacctcacagagctggaaggctgggaa
gaactggaagataacgaaaaggagcagatcagccagctcattgcagacctgtcttctaag
gcagctgggacaccaaagaagaaaaccgctgtccagggtaagctgacaaccactggccaa
gtgacatccccagtgaaaggtgcttcgtttgtcaccagtaccaatccccggaaattttct
ggattttcagcagccaaaaccaacaactctgagcaaggttcctccagccctgcccctaag
acaagtctgtcggcaagtaaatgtgaccctaagcacaaagactgtctactacgagaattc
cggaagctgtgtgccatggtggctgaaaatcctagctacaatacaaagacccagatcatc
caggacttcttgcagaaaggctctacaggagatggcttccacggtgatgtgtacctaaca
gtgaagctgctgctgccgggagtcattaagagtgtttacaacttgaacgataagcagatt
gtgaaactttttagccgaatttttaactgcaacccagatgatatggcccgggacctagaa
cagggtgacgtgtcagagacgatcagagtcttctttgagcagagcaagtctttcccccca
gctgccaaaagcctcctcaccatccaggaagtggatgccttcctcctgcacctctccaag
ctcaccaaagaggatgagcagcagcaggccctacaggacattgcctccaggtgtacagcc
aatgaccttaaatgcatcattcggctaatcaaacatgatctgaagatgaactcgggtgca
aagcatgtgttagatgcccttgaccccaatgcttatgaagccttcaaagcctcacgcaac
ctgcaggatgtggtggagcgggtccttcacaatgagcaggaggtgaagaaggacccaggc
cggcgacgggctctgagtgttcaggcctcactgatgactcctgtgcagcccatgctggct
gaggcctgcaagtccatcgagtatgcaatgaagaagtgtcccaatggcatgttctctgag
atcaagtacgatggtgagcgagtccaggtgcataagaagggggaccacttcagctacttc
agccgcagtctcaagcctgtcctgcctcacaaggtggcccactttaaggactacatcccc
aaagcctttcctgggggtcagagcatgatcttggattccgaggtgctcctgattgacaac
aacactggcaaaccactgccctttgggactctgggagtgcacaagaaagctgccttccag
gatgctaatgtctgcctgtttgtttttgattgtatctactttaatgatgtcagcttgatg
gacaggcctctctgtgagcgaaggaagtttcttcatgacaacatggttgaaatccagaac
cggatcatgttctcagaaatgaagcaagtcacaaaagcctcagacctggctgacatgata
aaccgggtgatccgagagggcttagaagggctagtgctgaaggatgtgaagggtacatat
gagcctgggaagcggcactggctgaaagttaagaaagattatttgaatgagggggccatg
gctgatacagctgatctggtggttcttggggccttttatggacaagggagcaaaggtggc
atgatgtccatcttcctcatgggctgctatgaccctgacagccagaagtggtgcactgtt
accaaatgtgctggaggccatgatgatgccacacttgcccgcctgcagaaggagctagat
atggtgaagatcagcaaggatcccagcaagatacctagttggctgaagatcaacaagatc
tactaccctgacttcattgttccagacccaaagaaagctgctgtgtgggagatcacaggg
gcagaattctccaaatctgaggctcacactgctgatgggatctccatccgatttcctcga
tgcactcgaatccgggacgacaaggactggaaatctgccactaacctcccccaactcaag
gaactgtaccagctgtccaaagaaaaggcagacttcgctgtagtggctggagaggagggg
aattccgctactggagatagcagtggcgagaatgaaggcactgctgggtctgctgcggcc
cccaaggcccctcctagtaagtcctacagtggcaagaaggctgaacagaagctgaataac
cccaatagcagaggtggcaacaaggtgagtccaaagccttcccccatgaaaccaggagac
aagctggctgtgaagtcttctccagtgaaagtgggggtgaagaggaaagctgatgatgag
acccaatgcccaacaaaggtgctgttggatgtcttcaccggggtacggctctacttgcca
ccttccacaccagacttcagacagctcaaacgctactttgtggcattcaatggggacctg
gtacaagaatttgacatggcctcagccacacatgtgctgggtaacagggacgacaacacc
gaggcccagctggtctctccagagtggatttgggcatgtatccggaaacggaggctgata
gctccctgctag
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