Mesocricetus auratus (golden hamster): 101836799
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Entry
101836799 CDS
T08306
Symbol
Col18a1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X2
KO
K06823
collagen type XVIII alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101836799 (Col18a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maua04147
]
101836799 (Col18a1)
00535 Proteoglycans [BR:
maua00535
]
101836799 (Col18a1)
00536 Glycosaminoglycan binding proteins [BR:
maua00536
]
101836799 (Col18a1)
Exosome [BR:
maua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101836799 (Col18a1)
Proteoglycans [BR:
maua00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101836799 (Col18a1)
Glycosaminoglycan binding proteins [BR:
maua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101836799 (Col18a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Laminin_G_3
Laminin_G_2
DUF7693
Motif
Other DBs
NCBI-GeneID:
101836799
NCBI-ProteinID:
XP_012969354
UniProt:
A0A1U8C1A8
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MAPDPSRRLWLLLLLLLSCCLEPARPDRNPLNPLNPLSPLVWLWSTKTNDPISEPKSSSP
VEPTESPTTHAVPQDGLAEQQTARANPKLPPEDQEAGQSGTPTTTATPIPPMASAASPDM
KEENVAGVGAKILNVAQGIRSFVQLWDENPATKKSAGMEASASSIPSALLTPTEFSSAPQ
EGDTTLWLNRGVPSSPDVQTTEAGTLTVPTQPPPSLSSLQAPLRRPTPPENVAEEVGLPQ
LLGDPLPQQITQIDDPHVGPVYIFGRDSSSSQTAQHHFPRLFFRDFSLLFHIQPATKAAG
VLFAITDTVQKVVSLGVKLSGVQNGHQNISLLYTEPGATQTQTGASFHLPAFVGQWTHFV
LSVDGGSVTLYVDCEEFQRVPFARSPQGLELEHGSGLFVGQAGAADPDKFQGKISELKVR
QNPRVSPVLCSDEDGDDEDRASGDFGSGFEESSKPHREEDTSLAPSLPQPPPVTSPPLAG
GSTTEDSRTEETEEETTVDSIGAETLPGTDSSRARDESVQNHGGGLIKGGLKGQKGEPGA
RGLPGPAGPQGPAGPVIQSPIAQPVPGAQGPPGPQGPPGKDGAPGRDGEPGDPGEDGRPG
DAGPQGFPGTPGDVGPKGEKGDPGVGARGPPGPPGPPGPSFRQDKLTFIDMEGSGFSGDL
ESLRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSYAPGPAGLPGVPGKEGPPGFPGPPGPP
GPPGKVGPPGEAGQKGNVGEVGIPGPKGSKGDLGPVGVPGKTGMAGPPGPTGPPGPPGPP
GPPGPGFAAGFDDMEGSGIPFWSTARSSEGLQGPPGLPGLKGDPGVTGPPGAKGEVGAEG
VQGMPGLPGRAGAAGSPGPKGEKGSQGEKGSPGKDGVGLPGLPGPPGPPGPVLYVSNEDR
AVVTTPGPEGKPGYAGFPGPAGPKGDLGSKGEQGLPGPKGEKGEPGAIFGPDGRALGHAQ
KGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGTNGLKGEKGEPGDASLGFSMRGLPG
PPGPPGPPGPPGMPIYDSNAFVESGRPGLPGQQGVQGPSGPKGDKGEVGPPGPPGQFPID
FFNLGAEMKGDKGDRGDTGQKGERGEPGVAGGGFFSSSVPGPPGPPGYPGIPGPKGESIR
GPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTVSVPGPPGPPGPPGPPGAM
GASAGQVRIWATYQTMLDKVREVPEGWLIFVAEREELYVRVRNGFRKVLLEARTALPHGT
GNEVAALQPPLVQLHEGSPYTRREHSYSTARPWRADDILANPPRLPEPQPYPGVPHHHSS
SVHQPPAHPTGSPAHTHHDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTF
RAFLSSRLQDLYSIVRRADRGTVPIVNLKDEVLSPSWDALFSGSQGQLQPGARIFSFDGR
DVLRHPVWPQKSIWHGSDPSGRRLMESYCETWRTEATGATGQASSLLSGRLLEQKAASCH
NTYIVLCIENSFMTSFSK
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcagacgcctctggctgctgctgctgctgctgctctcctgctgc
ctcgagcccgccaggcctgaccggaatcccctgaatcccttgaatcccctgagtcctctg
gtgtggctatggtccaccaagaccaatgatccgatctccgagcccaagagcagttcacct
gtggagcccacagagagccccaccacgcacgcggtcccccaggatggcctcgcagaacag
cagacggctcgtgccaaccccaagctgcccccggaggaccaggaagctggccagagtggg
acccctacaaccacagccacccccatcccccctatggcttctgcggcgagcccagacatg
aaggaggagaatgttgctggcgttggagccaagattctgaatgtggcccagggcattcgg
agcttcgtccagctgtgggatgagaacccggccaccaagaagtcggctgggatggaagcc
tcagcttcctccatcccttctgccctcctcactcctactgagttctccagcgccccccag
gagggggacaccaccctctggctgaacagaggtgttccaagttctccagatgttcagaca
accgaggctggcaccctgactgtacccacccagccacctccctccctgagcagcctccag
gcacccctgagaagaccaacacccccagagaatgttgctgaggaggtggggctgccacag
ctcctcggggaccctctaccccagcagatcacacaaatcgacgaccctcacgtcgggcca
gtctacatctttggacgggactccagcagtagccagacggcccagcaccacttccccaga
ctcttcttccgtgacttttctctcctgtttcatatccagccggccacaaaggctgcaggc
gtcctgttcgccatcacagacactgtgcagaaggtggtctcactgggcgtgaagctctca
ggggtgcagaatgggcaccaaaacatctcactgctctacacggagcctggtgccacccag
actcagacaggtgccagcttccacctacctgcatttgttggccagtggacacactttgtg
ctcagcgtagatggaggttctgtgactctctacgtagactgtgaggagttccagagagtg
ccgtttgcgaggtccccacagggtctcgagctggagcatggctctggcctctttgtgggt
caggctggagctgctgaccctgacaagttccaggggaagatctcagagctgaaggtacga
caaaacccccgggtgagccctgtgctctgctcggatgaagacggcgatgatgaagacagg
gcgtctggggactttggaagtggctttgaagaaagtagcaagccacacagggaggaggat
acatctctagctcccagtctcccccagccaccacccgtcacttccccacccctggctgga
ggcagtaccacagaggattctagaacagaagaaacggaagaagaaaccacggtagattct
ataggagcggagacccttcctggcacagattcaagccgtgcacgggacgagagtgtccag
aaccacggaggtggcttgataaagggaggtctgaagggacaaaagggggagccaggtgcg
cggggcctacctggcccagctggtccccagggtcctgcaggcccagtgatacagagcccc
attgcacaacctgtccctggagcacaaggacccccaggacctcagggaccaccagggaag
gatggcgctccaggaagggacggtgaaccgggtgaccctggtgaagatgggaggccgggt
gacgctgggcctcaaggctttccagggaccccaggagacgtgggccccaagggtgagaag
ggagatcctggtgtcggagcacgaggacctccaggacctccagggccaccaggaccctcc
ttcagacaggacaaactgaccttcattgacatggaaggatccggtttcagtggagatctg
gagagcctcagaggcccacgaggcttccctggccccccgggaccccctggtgtcccagga
ctgcctggtgagccagggcgctttggggtcaacagctcctacgctccaggaccagcgggc
cttcctggcgttcccgggaaggaagggcctcccggatttcctggtcccccgggacctcca
ggtcctcccggcaaagtgggcccaccaggagaggctggccagaaaggcaatgtcggcgag
gtgggcatcccaggacccaaggggagcaaaggagaccttgggcctgtcggtgtacctggg
aagactggcatggctggacctcctgggccaactggacccccaggacctccgggacccccg
ggaccaccaggcccgggatttgccgctggattcgatgatatggaaggctctggaataccc
ttctggtcaacagcccgaagctccgaagggctgcagggacctccggggttgccaggactc
aagggggatcctggagtgacagggccacctggagccaagggagaagtcggagcagaagga
gtccagggcatgcctggccttcccggaagagccggtgcagctgggtccccggggccaaaa
ggagaaaaagggagccagggagaaaaggggagcccaggaaaagatggagtgggtttgcca
ggcctccctggccccccaggacctccagggcccgtgctctatgtgtcgaatgaagacaga
gcagttgtgaccacgccaggacctgagggcaagccggggtacgcaggcttccctggacct
gctgggccgaagggtgacctgggttccaaaggcgagcagggtcttccagggcccaagggt
gagaagggagagccgggcgctatctttggccctgatggcagagccctgggccacgcccag
aaaggagccaagggagagccaggcttccgaggacccccgggtccttatgggcgacctggg
cacaagggtgaaatcggcttccctggacggccgggtcgtcctggaacgaatggattgaag
ggagagaaaggggagcctggagatgccagccttgggtttagcatgaggggactgcctgga
ccccctgggcctccaggccccccaggtcctcctgggatgcccatctatgacagcaatgca
tttgtggaatctggccgacctggactaccaggacagcaaggtgtgcaggggccatcagga
ccgaagggtgacaaaggagaggtgggcccacctgggcctccagggcagttccccatcgac
ttcttcaacctgggagcggaaatgaagggcgacaagggagaccgaggggacactggacag
aaaggagagaggggagaacctggggtcgctggaggtggattcttcagctcaagtgtccct
ggacctcctggcccccctggctaccctgggattccgggtccaaagggagagagcatccgg
ggcccacctggccctcctggtcctcaaggacctcctggcattggctatgaggggcgccag
ggccccccaggacctccaggacctccaggacctccctccttccctggccctcacaggcag
actgtcagtgttcctggtcctccgggtccccctggccccccaggtcccccaggagccatg
ggtgcctctgctgggcaggtgaggatctgggccacataccagaccatgctggacaaggtt
cgcgaggtgcccgagggctggctcatcttcgtggctgagagggaagagctctacgtccgt
gttagaaatggcttccggaaggtgctgctggaggcccggacagcgctcccacatgggacg
ggcaatgaggtcgcggctctgcagcccccactggtgcagctccacgagggcagcccatat
acccggcgggagcactcctactccacggctcggccctggcgggcagatgacatcctggcc
aacccaccacggctgccagagccacagccttaccccggagtcccacaccaccacagctcc
tctgtgcaccagccgccagctcaccccacgggctcgcctgctcacactcaccatgatttc
cagccagtgctccacctggtggcactgaacagcccgctgtcgggtggcatgcgtggcatc
cgtggggccgacttccagtgctttcagcaggcccgagccgtggggctggccggcaccttc
cgtgccttcttgtcgtctaggctgcaggacctctacagtattgtgcgccgtgctgaccgt
gggactgtgcccatcgtcaacctgaaggatgaggtgctatctcccagctgggatgctctg
ttttccggctcccagggtcaactgcagcctggggcacgcatcttttctttcgatggcaga
gatgtcctgagacacccagtctggcctcagaagagcatatggcatggctcagaccccagc
gggcgcagattgatggagagctactgtgagacatggcggacggaggctaccggggctacg
ggtcaggcctcctccctgctgtcaggcaggctgctggaacagaaagcagcaagctgccat
aacacctacatcgtcctgtgcatcgagaatagtttcatgacctctttctccaagtag
DBGET
integrated database retrieval system
