KEGG   Mesocricetus auratus (golden hamster): 101836984
Entry
101836984         CDS       T08306                                 
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua03030  DNA replication
maua03410  Base excision repair
maua03420  Nucleotide excision repair
maua03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:maua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101836984 (Rfc1)
   03410 Base excision repair
    101836984 (Rfc1)
   03420 Nucleotide excision repair
    101836984 (Rfc1)
   03430 Mismatch repair
    101836984 (Rfc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maua03032]
    101836984 (Rfc1)
   03400 DNA repair and recombination proteins [BR:maua03400]
    101836984 (Rfc1)
DNA replication proteins [BR:maua03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101836984 (Rfc1)
DNA repair and recombination proteins [BR:maua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101836984 (Rfc1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT BRCT_2 AAA_22 Rad17 RuvB_N AAA_14 AAA_5 AAA_30 AAA_16 AAA_33 AAA_17 Zeta_toxin nSTAND3 AAA_7 AAA_18 RNA_helicase NTPase_1 NPHP3_N AAA_28
Other DBs
NCBI-GeneID: 101836984
NCBI-ProteinID: XP_040603044
LinkDB
Position
Unknown
AA seq 1146 aa
MDIRKFFGVISSGKKPVSETVKKNEKIKPSEGTVKGKKGVKDVKVNNSCKEDASKPKQHN
KKKRIIYDSDSESEETVQIKNAKKKSEKSPLSSKPGKISRKDPVTYVSETDEDDDFVCKK
AASISKENGVSTNSYLGASNVKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSGKK
MVASKRKESSQNTDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AQKDPEEGESFSPVQADQSKAESHKSPNKAEHFLNERKTRSPAKCSKGGSSKGSEQPYRS
SAHQKDACSSPKASSKLALMKAKEERSYKDTELTASKRKEHTTELKGEKQTPKKTKSSPV
KKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIE
REEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTM
PGKKSKYEIAAEAEMKKEKSKLERTPKKHEQGKRKITPTKTESEPKKSKLTPQRDSPAKA
TKENAHVSRRGLDLTEQVVRETPGNSRAQRPAEDSTGNKVESLLWVDKYKPTSLKNIIGQ
QGDQSCANKLLRWLRNWHKSSSEEKKHARCGKLSSKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGATPSVSLKHVLIMDEV
DGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKS
AMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKALTYDQAKADSQRAKK
DIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMK
KHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSW
LGKHSSTGKHDRIVQDLALHMSLRTNSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQHVV
TLMDTYYLMREDFENIMEVSSWGGKPSPFSRLDPKVKAAFTRAYNKEVHLTPYSLQAVKT
PRLSTGPALDSEYNEESQEDDSQPDEKEQDAIETDAMIKKKTRSSKPSKPEKDKESKKGK
QRSSKK
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggacattcggaaattctttggggttatatcaagtggaaaaaagcctgtaagtgagaca
gtaaagaagaatgagaaaataaaaccttcagagggaactgtcaaaggaaagaaaggagta
aaggatgtcaaggttaataattcctgtaaagaggatgcatccaaaccaaagcaacacaac
aagaaaaagagaatcatctatgactcagattcagaatcagaggagacagtgcagataaaa
aatgctaaaaagaaatcagaaaaatcgccactgtcttccaaacctggtaaaatttctcgg
aaggatcctgttacttacgtttctgagacagatgaagacgatgactttgtatgtaaaaag
gcagcctccatatcaaaagagaatggagtatctacaaacagttaccttggcgcatcaaac
gtgaaaaagaatgaagaaaacactaagactaagaataaacctttatcaccaataaaactt
acaccaacatcagtgcttgattattttggaactggaagtgtgcagagatctggtaagaag
atggtggcaagcaaaagaaaagagtcttctcagaacacggatgattccagattaaatgat
gaggccatcgccaagcagttacagcttgatgaagatgcagagctggagagacagttgcat
gaagatgaagagtttgctcggacattagccatgttggatgaagaacccaagaccaaaaag
gcccaaaaggatcctgaagagggagaatcattttcacctgtccaagctgatcaaagcaaa
gcagaaagtcataaaagccctaataaagcagaacatttcttaaatgaaagaaaaacccgt
agccctgctaagtgcagcaaaggtgggagctccaaaggatctgagcaaccctacagatcg
tcagctcatcagaaggatgcctgctcttctcccaaggccagctccaagctggcacttatg
aaagcaaaagaagaacgttcttacaaagacacagagctgacggcctcaaaaagaaaagaa
cacaccactgaactcaaaggagagaagcagactcctaagaaaaccaaaagttctccagtt
aaaaaagagtctgtaagtccagaagattctgaaaagaagcgcactaattatcaagcttat
cgaagctacttaaatcgtgaaggtcccaaagctctgggctccaaagaaatacccaaggga
gctgaaaattgcttggaaggcctgacatttgtgatcacaggcgtgctggagtccattgaa
cgggaagaagccaagtctctaattgaacgttatgggggcaaagtaacaggaaatgtgagc
aagaaaaccaactatctcgttatgggccgggacagcggacagtccaagagtgacaaggca
gcagctttgggaacaaaaatccttgatgaagatggtctgttggatctgattcgaactatg
ccaggcaagaaatccaagtatgaaatagccgctgaagctgagatgaagaaggaaaagtcc
aaattggagcgaacacccaaaaaacacgagcaaggaaaaaggaaaattactccaaccaag
acggagtcagagcctaaaaagagcaaactgactcctcagagggacagccctgcaaaagcc
acaaaggagaacgcacatgtgtctcggaggggcctggacttgacagagcaggtggtcagg
gagacacccggcaacagcagggctcagcgtccggctgaggacagcactgggaacaaagtg
gaaagcctgctctgggtggataagtacaagcccacgtcactcaagaacataatcggacag
caaggtgaccagagctgtgccaacaaactgctacgctggctcagaaactggcataagagt
tcttccgaagagaaaaaacacgcgaggtgtggcaaactctccagcaaagatgatggttcc
agtttcaaggcagcactgctgtctggcccgccaggtgttggcaaaaccactacagcttct
cttgtatgtcaggaattgggctacagttacgtggaactaaatgcaagtgatactcggagt
aagaacagtttgaaagcagttgttgctgaatcattgaacaacaccagcatcaaaggcttt
tatacaagcggagcaactccttcggtgagcttgaagcatgttctcatcatggatgaggtt
gacggcatggcaggcagtgaggacagggggggaattcaggaactaataggcctgataaag
catactaaaattcccatcatttgtatgtgcaatgatagaaatcatcccaaaattcgttct
ttggttcattattgttttgatcttcgtttccaaagacctcgggttgaacagattaagagt
gcaatgttgtctattgcatttaaagagggcttaaagatcccccctccagccatgaatgag
ataattttgggagctaatcaagatgtcagacaggttttacataatatgagtatgtggtgt
gcacagagtaaggcactaacttatgaccaagccaaggcggattctcagagggccaagaag
gatatcagactgggcccatttgatgttgccaggaaagtgtttgcagctggagaggagact
gcacacatgtcactgatggacaaatcggatctctttttccatgactactccatagccccc
ctctttgtccaagagaactacctccatgtaaagcctgtggctgcagggggcgacatgaaa
aaacacttgatgcttttaagccgggcggcagacagcatatgtgacggtgacttagtggac
agtcagatccggagcaagcaaaactggagtctcttgcccacacaggccatttatgccagt
gttcttcctggagagttgatgaggggctatatgactcagtttcctaccttcccaagctgg
ctggggaagcactcatctactggcaaacatgatcggattgttcaggacctagccttgcac
atgagtcttagaactaactctagcaaaaggacagtgaacatggattacctgtcacacatc
agagatgcacttgtgcaacccttgacctcacaaggggtagaaggagtccaacatgttgtc
acacttatggacacatactatttgatgagagaagactttgagaatatcatggaagttagc
agctggggtggcaagcccagtcccttttccagactggatcccaaggtgaaagcagccttc
acaagagcttataataaggaggtccacctgactccatactcacttcaggcagtaaagaca
ccgaggctcagcacaggcccagcactggattctgaatacaatgaagagtcacaggaagat
gacagtcagcctgatgagaaagagcaggatgcaatagagaccgacgccatgatcaagaaa
aagacaaggtcttcaaagccttcaaaaccagaaaaagataaggagtccaaaaaaggaaaa
caaagaagttcgaagaaatga

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