Mesocricetus auratus (golden hamster): 101837116
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Entry
101837116 CDS
T08306
Symbol
Rxrb
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03320
PPAR signaling pathway
maua04659
Th17 cell differentiation
maua04919
Thyroid hormone signaling pathway
maua04920
Adipocytokine signaling pathway
maua04928
Parathyroid hormone synthesis, secretion and action
maua05200
Pathways in cancer
maua05202
Transcriptional misregulation in cancer
maua05207
Chemical carcinogenesis - receptor activation
maua05216
Thyroid cancer
maua05222
Small cell lung cancer
maua05223
Non-small cell lung cancer
maua05226
Gastric cancer
maua05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101837116 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101837116 (Rxrb)
03320 PPAR signaling pathway
101837116 (Rxrb)
04919 Thyroid hormone signaling pathway
101837116 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
101837116 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101837116 (Rxrb)
05202 Transcriptional misregulation in cancer
101837116 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
101837116 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
101837116 (Rxrb)
05216 Thyroid cancer
101837116 (Rxrb)
05222 Small cell lung cancer
101837116 (Rxrb)
05223 Non-small cell lung cancer
101837116 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101837116 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maua03000
]
101837116 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maua03310
]
101837116 (Rxrb)
Transcription factors [BR:
maua03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101837116 (Rxrb)
Nuclear receptors [BR:
maua03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101837116 (Rxrb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
101837116
NCBI-ProteinID:
XP_040588369
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MSWAARPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAATATGEQQ
SPEPEAEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGIPPSPPPGPPLTPSGPPPPMP
PPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLG
VRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK
DCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRIL
EAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADRQLFTLVEWAKRIPHFSSLPL
DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV
SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEVLREKVYASLETYCKQKYPEQQGR
FAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcggctcgcccgcccttcctcccgccgcggcatgccgcggggcagtgtggg
ccggtgggggtgcggaaagagatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcggcggcggcggcggcgaccgcgaccggagagcagcaa
agcccggagccggaggcggagccggagccgggggaggctggccgggacgggatgggcgac
agcgggcgggattcccgaagcccagacagctcctcccccaaccccctctcccaggggatc
ccgccgtcgcctccccctggcccacctctcaccccttcgggacctccgcctccaatgcca
ccccctccgctgggctccccgttcccagtcatcagctcttccatggggtcccctggtctg
ccccctccggctcccccaggattctccgggcccgtcagcagccctcagattaactccaca
gtgtcgctccctgggggtgggtctggcccccccgaagatgtgaagccaccggtcctgggg
gtccggggcctgcactgcccaccccctcccggtggccccggggctggcaaacgtctctgt
gcaatctgcggggaccggagctcaggcaagcactacggagtttacagctgtgagggctgc
aaggggttcttcaaacgcaccattcggaaggacctgacctactcctgccgcgataacaaa
gactgcacggtggacaagcgccagaggaaccgctgtcagtactgccgctaccagaagtgc
ctggccactggcatgaagagggaggcggtccaggaggagcggcagcggggcaaagacaaa
gacggggatggggacggggctgggggcgcccccgaggagatgccggtggacaggatcctg
gaggcagagctcgccgtggagcagaagagtgaccaaggcgttgagggtcccgggggcacc
ggggggagcggcagcagcccaaatgacccagtgactaacatctgccaggcggctgacaga
cagctgttcacgctcgttgagtgggcgaagaggatcccacacttctcctccctgcccctg
gatgaccaggtcatactgctgcgggcaggctggaacgagctcctcattgcctccttctcc
catcggtccatcgatgtccgagatggcatcctcctggccacgggtcttcatgtgcacaga
aactcagcccattccgcaggcgtgggagccatctttgatcgggtgctgacagagctagtg
tccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctgcgggcaatcatt
ctgttcaatccagatgccaagggcctctccaaccccggagaggtggaggtcctgcgggag
aaggtgtacgcgtccctggagacctactgcaagcagaagtacccggagcagcagggccgg
ttcgccaagctgctgctgcgtcttccggccctgcgctccatcggcctcaagtgtctggag
cacctgttcttcttcaagctcatcggcgacacccccattgacaccttcctcatggagatg
ctcgaggctccccaccagctggcctga
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