Mesocricetus auratus (golden hamster): 101838572
Help
Entry
101838572 CDS
T08306
Symbol
Helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101838572 (Helz)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
101838572 (Helz)
3'-5' decay
Other 3'-5' decay factors
101838572 (Helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
zf-CCCH_4
nSTAND_NTPase5
AAA_22
Mov-10_helical
Bac_DnaA
AAA_7
AAA_16
AAA_14
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
101838572
NCBI-ProteinID:
XP_005070050
UniProt:
A0A1U7QB44
A0A9B0KV95
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MEDRRAEKSCEEACESLKRQDYDMALQHCSEALLSLGQYSMADVAGPCALEAERIQIESY
LYRIASFLQLKNYRQADEDCRHVLGEGLAKGEGAFRAVLCCMQLQGKLQLVSSILAKSLS
GESLNGMVTKDLTRLKTLLTETETASSVLPGCHVEDLDEGSCNGWHFRPPPRGITSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLIE
KWMSSLSPEKVLSECIEGVQVEHNPDLSVTVNTKRSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGTF
RQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIVDFEPNET
TDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKANYQSRLHDLLYIEEIAQYKEVSKFNLK
VQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVPK
EKLVQTQGTKEKVYEATIEEKTKDYIFLRISRECCEELNLRPDCDTQAELQFQLNRSPLC
EMHYALDRIKDNGVLFPDTSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISGAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ
LDLDPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIVLCHENHSLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHLGNTSRQQQSPPKGKGLHHPQSDH
FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPSLGKSPSPVQRIDPHTGTSILYVPAVYG
GNVVMSVPLPVPWTGYQGRFAVDPRIITHPAAMAYNMNLLHTHGRGSPIPYGLGHHPPVN
IGQPQNQHTEKDQQEQNRNGKTDTNNPGPEINKIRTPEKRPTESKQADLESNPQNRSPES
RPSIVYSNTKFPRKDNLNPRHINLPLPASHAQYAIPSRHFHPLPQLPRPPFPIPQQHTLL
NQQQNNLPEQPNPVAPQPNQVAPQPNPVAPQPNPVAPQPNPVVQQQSQVPAQALQPPPQL
SPAFQAGPTNAFFNNAVAHRPQSPPAAEAVVPEQQPTPVLPDGHSPLRAITQPGPILASP
LNNFVDESSPGLPIGEALDRVHGSVALETLRQQQARLQHWSEHHAYLSQGSIPYPHHHHP
HLPHLPQPSMGLHQPPVRAEWKLASRVDDEAETTFSRFQDLLRELSHRDQGDTRELAEMP
PPQSRLLQYRQVQTRSPPAVPSPPCSTDHSSHFSNFNDSSRDIEVANSPAFPQRLPPQLF
GSPFSLPSEHLAPPPLKYLAPEGAWNFANLQQNHLIGPGFPYGLPPLPPRPPQNPFIHIQ
NHQHAIGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSAQPCVEEASTPQ
GSLPQGKEQQDHSRQPAFSFPAPESWASTTSPAPYQNIPCNGPSRTAQPRELIAPPKTVK
PAEDQLKPDSSEVSSSFNYTVLQHLGQFPPLMPNKQIAESANSSSQQSPAGSKPTMSYAS
ALRAPPKPRPPPEQAKKGSDPLSLFQELSLGSSPGSNGFYSYFK
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaagaagcgtgtgagtcactgaagaggcag
gactatgacatggccctccagcactgctcagaggccctgctttctcttggccagtactcc
atggcagacgttgcagggccgtgtgcattagaggcagagcgcatccagatcgagagttat
ctctacagaatcgcctcattcctgcaactgaaaaactacaggcaagctgacgaagattgt
aggcatgtacttggggaagggctggccaagggagagggtgccttccgggcagtgctgtgc
tgcatgcagctgcaggggaagctccagctggtgtcctccatccttgccaagtcactgtca
ggagagtctctgaatgggatggtaacaaaggatttgacaagactcaagacgcttctcaca
gagacagagacagcaagtagtgtcctccctggatgtcatgtggaagacttagatgaaggg
tcttgtaatggttggcatttccgtccgccacccaggggaatcacaagcagcgaggaatat
actttgtgtaaaaggtttttagagcaaggaatctgtaggtatggtgcccagtgtacttca
gcacattcccaggaagaattagcagagtggcagaaaagatacgcctcgcggttaataaaa
ctgaagcagcaaaacgagaataaacagctctcgggcagctacatggaaaccttgatagaa
aagtggatgagctcgctgtctcctgagaaagtgcttagcgagtgcatagagggagttcag
gtggagcacaaccctgacttgtcggtcaccgtcaacaccaaaagatcccaccagacatgg
acctttgctctgacctgtaagcctgcaagaatgctgtatcgggtagcattgctttatgat
gctcatcgtcctcattttagtatcattgccatatctgccggagatagtactacccaggta
tcacaagaagtccccgaaaactgtcaagaatggataggaggaaagatggcccaaaatgga
ttagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaactttt
cgccaaaccatagttttcgactttggattggagccagtactcatgcaaagagtaatgatt
gatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacagcagctggtaact
acagccaagcgctgggattcttcttctaagactattgtagattttgaacctaatgaaact
actgatttggagaagagccttctgatcagataccaaatccctctttctgctgaccagctg
tttacgcagtctgttttagacaaatcattgaccaaggctaactatcagtcacggttgcac
gacctgctttatattgaggagatagcccagtataaagaagttagcaagttcaaccttaaa
gtgcaattgcagattttagcaagcttcatgctcactggagtttctgggggtgcaaagtat
gctcagaatggacaactttttggtcgttttaagcttactgaaaccctttctgaagatact
ttggctggacgactggtgatgaccaaagtcaatgcagtttatttattgccagtccctaaa
gagaagctagtacagacccagggaaccaaagagaaggtttatgaagctactattgaagaa
aaaacaaaagattatatatttttaaggatatccagggaatgctgtgaagagcttaatctt
cggcctgactgtgacacgcaggctgagcttcagtttcaattgaatcgatcgcccctctgt
gaaatgcattatgcactagacaggataaaggacaatggtgttttgtttccagacaccagt
atgactcctaccataccttggagtcccaacagacaatgggatgagcagttggatcctcga
ctaaatgcaaaacagaaagaagctgttctggccatcaccactccactctccatccagctg
ccgcctgttctcatcatcggaccctacgggacaggcaaaaccttcactctggctcaggcc
gtcaagcacatcctacagcagcaggagactagcaggattctcatttgcacccattctaat
agtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtgtatttccgaaaccgctgggtgaagactgtccacccagtc
gtgcatcagtactgcttgatctcaggcgcacactccacttttcagatgccccagaaggaa
gacattctgaaacatcgagtggtggtggtcacattgaatacttcccagtacctctgccag
ctggaccttgaccccggtttttttacgcatattctgttagatgaagctgcccaggccatg
gagtgtgagaccattatgcctctagccttagcaactaaaaacacacggattgttttggct
ggtgatcatatgcagctcagtccttttgtttacagcgagtttgccagggagagaaacctt
catgtttcattacttgatcgactctacgagcattaccctgccgagtttccatgtaggatc
ctcctctgtgagaactaccgctctcatgaagctatcatcaactatacctctgagcttttc
tacgagggtaaactaatggccagtggaaagcagccagcacacaaggacttctacccactc
acgttttttacagcacgaggggaagacgtacaagaaaagaatagcaccgccttttataac
aatgcagaggtatttgaagtggtggaacgcgtggaggagctaagaaggaagtggccggta
gcatgggggaagttagacgacggcagtattggtgtggtgactccatacgctgaccaggtg
tttcggatccgcgctgaacttcggaaaaagaggctctctgatgtgaatgtagaaagggtg
ctaaacgttcaaggaaagcaattcagagttctgtttcttagcacagtgcgtacacgccac
acttgcaagcataagcagacaccaattaaaaagaaagagcaacttttggaagactccacc
gaggatttagattacggttttttatctaactacaaacttctcaatactgccatcacaaga
gcacaatccctggttgctgtggtgggagaccccattgctctgtgctcaattggaaggtgt
aggaagttttgggaacgatttattgtcctgtgtcatgaaaatcatagcctacatgggatc
acatttgaacagatcaaggcacagttagaggctttagaactcaagaagacatatgtgttg
aatccacttgctcctgagtttatcccccgagctttacgactgcagcatttgggaaacacc
agcagacagcagcagtcaccacccaaggggaaaggccttcatcatccccagagtgaccat
ttccagaatgatggcattgttcagcccaatccttctgtacttattggcaatcctattaga
gcatatacacctccaccccctcttggacctcacccaagtttgggaaaatctccaagcccc
gttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctatgga
gggaatgtagtcatgtcggtgcctttgcctgtaccatggacaggataccagggtaggttt
gcagttgatcctcggattattacacacccagcagcaatggcctacaatatgaacctgtta
catacacatggacgtgggtcaccgatcccttatggccttggacatcatccacctgtcaac
attgggcagccacagaatcagcacacagagaaggatcagcaggagcaaaatagaaacggt
aaaactgatacaaataaccccggtcctgaaattaataagatccgaacaccagagaaaagg
cctacagagtccaaacaggctgatttggaatcaaatccacagaatagaagtcctgaatcc
cgtcccagcattgtttattccaataccaaatttcctcgaaaagataatctcaacccaaga
cacataaatcttcctcttcctgcatcacacgcacagtatgcgatccctagccgccatttt
caccctcttcctcagctacccaggccaccatttcccattccccagcagcacaccttgtta
aaccagcagcagaataatttgcctgaacaaccaaatccggtggcaccccagccaaatcag
gtggcaccccagccaaatccggtggcaccccagccaaatccggtggcaccccagccaaat
ccggtggtccagcagcagagccaggtacctgcacaggccctgcagccaccacctcaactc
tctcctgcatttcaggcggggcccaccaatgcatttttcaataatgcagttgctcaccga
ccacagtctcctcctgctgcagaggctgtggttcccgagcagcagccaacacctgtgctt
cctgacggtcacagtccactgagagccatcacacagcctggtcctatcctggcatcacct
ctgaacaactttgttgatgagagctccccaggattgcctataggagaagctttggatcga
gtacatggaagtgtagctctggagacactgaggcagcaacaggcacggctacagcattgg
agtgagcaccatgcctatctcagccagggcagcatcccgtatccacaccatcaccaccct
cacctcccacatcttccccagccatccatgggcctccaccagccgccagtgagggcagag
tggaaactcgccagcagagttgacgatgaagcagagacaacattctccaggtttcaagac
ttactcagagagctgtctcatcgtgatcaaggtgacactcgagaactagctgaaatgcca
ccacctcaatcaagacttttgcaatatagacaagttcagactagaagcccaccagcagtc
ccgtctcccccttgcagcacagaccacagtagccacttttctaactttaatgacagcagc
agagacattgaagtagccaacagcccagccttcccacagcgcctcccacctcaactattt
ggctcccccttttcgttgccatctgaacaccttgccccacctcccctgaaatacctggct
cccgaaggagcatggaattttgctaacttgcaacaaaatcacttaatagggccaggcttt
ccctatggcctacctccattgcctcccaggccaccgcagaacccttttatacacatccag
aaccatcaacatgctattggtcaagagccatttcacccactgtcatctcgcacagtatct
tcttcttcgctccccagcctagaagagtatgagcccagaggacctggtcggcccttgtac
caaagaagaatttcatctagctcagcccagccttgtgtggaagaggcaagcactccccaa
ggcagcctgcctcagggcaaagaacagcaggaccacagccgccagcctgctttcagcttc
ccagcccctgagtcctgggccagcaccacctctcctgccccctaccagaacattccgtgc
aatggacccagcaggacagctcagcccagagagttgatagcaccacccaagactgtcaag
cctgctgaggatcagctgaagcccgacagctcggaggtgtccagttccttcaactacacg
gtgctgcagcacctcggccagttcccacccctcatgcccaacaagcaaatcgcagagtcg
gccaacagcagcagccagcagagcccggcagggagcaagcccactatgtcctatgccagt
gcgctgcgggccccgcccaagcccagaccgccacccgagcaggccaagaagggcagcgac
ccgctgtccctcttccaggagctcagcctgggcagcagcccgggcagcaacggcttctac
tcctacttcaagtga
DBGET
integrated database retrieval system
