KEGG   Mesocricetus auratus (golden hamster): 101838611
Entry
101838611         CDS       T08306                                 
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua03013  Nucleocytoplasmic transport
maua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101838611 (Thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101838611 (Thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maua03019]
    101838611 (Thoc6)
   03041 Spliceosome [BR:maua03041]
    101838611 (Thoc6)
Messenger RNA biogenesis [BR:maua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101838611 (Thoc6)
Spliceosome [BR:maua03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101838611 (Thoc6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta WDR54 NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I TRM82_WD DSE1_N Beta-prop_WDR75_1st ASA1 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 Phage_zn_bind_6
Other DBs
NCBI-GeneID: 101838611
NCBI-ProteinID: XP_005081706
UniProt: A0A1U7R8D9
LinkDB
Position
Unknown
AA seq 341 aa
MDHAAPSPVPLGQAEVSQALQRLHMTIFSQSVSPCGKFLAAGNNYGRIAIFSLSAALSSE
AKEESKKPMVTFHAHDGPVYSMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRDRS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSMSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggatcacgccgcaccgtcgcccgtgcctctgggtcaggccgaggtttctcaggccctg
cagcgcctgcacatgaccatcttttcccagagtgtctctccctgcgggaagtttctggca
gctggcaacaattacgggcggatcgccatcttcagtttgtctgctgccttgagttcagag
gccaaagaagaaagcaagaaacccatggtgaccttccatgcccatgacgggcctgtctac
agcatggtctccacagatcggcatctgctcagtgctggggatggcgaagtgaagggctgg
ctttgggcagagatcctcaagaagggctgtaaggaactgtggcgtcgccagcctccatac
aggaccagcctggaagtacctgaaatcaatgccttgctgcttgtccccaaggagaattca
ctcattctagctgggggagattgtcagctgcacactatggacctggaaactgggaccttc
acacgggccctccgcggccacacagactatatccattgcctggcactgagggatcgcagt
cctgaggtgctgtccggtggtgaggatggagctgtacggctttgggatctccgtatagcc
aaagaggttcagactatcgaagtctataagcatgaggagtgctcacggccccacaatggg
cgctggattggatgtttggctactgactcagactggatggtctgtggagggggcccagcc
ctcaccctctggcacctcaggtcttccacgcccactactgtctttcccattcgggcacct
cagaagcatgtcaccttctaccaggacctgatcctgtctgctggtcagggctgttgtgtc
aaccactggcagctgagtggggagcttaaggcccaggtgcctggttcctccccagggctg
cttagcctaagcctcaaccagcagccagcagcccccgagtgcaaggttctgactgcttct
ggcaacagctgtcgagtggacgtcttcaccaacctgggctaccgagctttctccatgtcc
ttctga

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