Mesocricetus auratus (golden hamster): 101839696
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Entry
101839696 CDS
T08306
Symbol
Npc1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
maua04142
Lysosome
maua04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101839696 (Npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101839696 (Npc1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
101839696 (Npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maua02000
]
101839696 (Npc1)
Transporters [BR:
maua02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
101839696 (Npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
101839696
NCBI-ProteinID:
XP_012979687
UniProt:
A0A1U8CJX3
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSARHPALGLLLLLLCPAQVFSQSCIWYGECGIAFGDKRYNCKYSGPPKPLPKDGNDLLQ
ELCPGFFFGNVSLCCDVQQLQTLKNNLQLPMQFLSRCPSCFYNLMTLFCELTCSPHQSQF
LNVTVTEDYFDAKTQENKTNVKELEYYIGQSFANAMYNACRDVEAPASNEKALGILCGKD
ASACNATNWIQYMFNKDNGQAPFTIIPVFSDLSILGMEPMRNATKGCNESVDEVTGPCSC
QDCSIVCGPKPQPPPPPVPWTILGLDAMYVIMWVTYMAFLFMFLGGLLAVWCHRRRCFVS
EYTPIDSNIAFSASTSDKGEASCCDPLGAAFDDCLRRMFTKWGAFCVRNPTCVIFFSLVF
IAACSSGLVFVQVTTNPVELWSAPHSRTRLEKEYFDKHFGPFFRTEQLIIQAPNTSGHIY
EPYPSGSDVPFGPPLSKEILHQVLDLQIAIESITTSYDNKTVTLQDICVAPLSPYNKNCT
ILSVLNYFQNSHSVLDHQVGDDFYVYADYHTHFLYCVRAPTSLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVSNYYNDTEKLQRAQAWEKEFINFVKNYKNPNLT
ISFIAERSLEDELNRESKSDAFTIAISYAIMFLYISLALGHIKSCSRLLVDSKISLGIAG
ILIVLSSVACSLGIFSYTGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETL
DQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGLAVFIDFLLQVTCFV
SLLGLDVKRQEKNRLDILCCVGGSDSDRGTQASESYLFRFFKNHFAPLLLKDWLRPIVIA
VFVGVLSFSIAVMNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHNYT
THKGQNMVCGGMGCDNDSLVQQIFNAAELDTYTRIGFAPSSWIDDYFDWVAPQSSCCRLY
NATHQFCNASVIDPTCIRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYS
SAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMKKAQLIASNITETMNSKGSNYRVFPY
SVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRVSRAEEALAHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFEIFYFRMYLAIVLLGATHGLIFLPVLLSYIGPSVNKAKRH
STQERYKGTEREQLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgccacccggccctcggcctcctgctgctgctgctgtgccctgcgcaggtg
ttttcacaatcctgtatttggtatggagagtgtggaattgcttttggagataagaggtac
aactgtaaatattctggcccaccaaaacccttaccgaaggacggaaatgacttgctacag
gagctctgtccaggattcttcttcggtaatgtcagtctctgctgtgatgttcaacagctt
cagacgctgaaaaacaacctgcagctgcccatgcagttcctgtccaggtgtccatcatgt
ttttataacctaatgaccctgttttgtgagctaacgtgtagccctcaccagagtcagttt
ctgaatgtgacagtaaccgaagattactttgatgctaagacacaggagaataaaacaaat
gtaaaggaattagagtattatattggacaaagctttgcgaacgcaatgtacaatgcctgc
cgtgatgtggaggcccctgcaagtaatgagaaggccttaggaatcctgtgtggaaaggac
gccagtgcctgcaatgccaccaactggattcagtacatgttcaataaagacaatggacag
gcaccgtttaccatcattcccgttttttcagatctttcaatccttgggatggaacccatg
agaaatgccaccaaaggctgcaatgagtctgtagatgaggtcacagggccgtgtagctgc
caggactgctccatcgtctgtggtcccaaaccccagcctcctccacctcccgtgccctgg
acgatcttgggcttggatgccatgtatgtcatcatgtgggtcacctacatggcatttctg
tttatgtttcttggaggacttttggcagtgtggtgccacagaaggcggtgttttgtgtct
gagtacacgcccattgacagcaatatagccttttctgcgagcaccagtgacaaaggggag
gcttcatgctgtgacccacttggtgcagcatttgatgactgtctgagacgcatgtttaca
aagtggggagctttctgtgtccgaaatcccacctgtgtcattttcttctcattggtcttc
atcgctgcatgttcttctgggctggtgtttgtccaggtcaccaccaaccctgtagagctc
tggtcagcccctcacagtcggacccgcttggagaaggaatactttgataagcactttggg
cctttctttcgaacggaacaacttattatccaagcccccaacaccagtggccatatctat
gagccatacccctcaggatccgatgtgccctttgggcctccactgagcaaagagattctg
caccaggtccttgacttacaaattgccattgaaagtattactacatcttacgacaataag
accgtgacacttcaagacatctgtgtggcccctctctctccatacaacaagaactgcacc
attttaagtgtcttaaattacttccagaacagccattcagtgctggaccaccaagtaggc
gatgacttctatgtatatgcagattaccacacacactttctatactgtgtacgggctccc
acctctctgaatgacaccagtttgctccatgatccttgcctgggcacatttggaggccct
gtgttcccatggcttgtgctgggtggctatgacgatcagaactacaataatgccactgca
cttgtgatcaccttccctgtcagtaattactataacgacacagagaagctccagagggcc
caggcctgggagaaagagtttattaattttgtgaaaaactacaagaatcccaatctgacc
atttccttcattgctgagagaagccttgaagatgaactcaaccgggaaagtaagagtgac
gcattcaccattgccatcagctatgccatcatgtttctgtatatttcccttgccttggga
cacataaagagctgtagcagacttctggtggattctaaaatctcactgggcatcgcggga
atcctgatagtgctgagctcagtggcctgctccctgggcatcttcagctacacggggatg
ccactgaccctcattgtcatcgaagtcatcccgttcttggtgttggctgtcggggtggac
aacatcttcattctagtgcagacctaccagagagacgagcgtcttcaggaggagacactg
gatcagcaactgggcaggatccttggggaagtggcccctactatgttcctgtcttccttc
tctgagacctcggcgtttttctttggggcgctgtcctcgatgccagctgtccacaccttc
tctctgtttgcgggcttggcggtcttcattgacttcctccttcaggtcacctgctttgtg
agcctcttggggttagatgttaagaggcaagagaaaaatcggctggacatcctgtgctgt
gtgggaggctctgacagtgacagaggcacccaggcctccgagagctacctgtttcgcttc
ttcaaaaaccactttgccccccttctgctgaaagactggctgcgaccaattgtgatagct
gtatttgtgggtgttctgtcattcagtattgcagtcatgaacaaagtagaaatcggattg
gatcagtctctttcaatgccaaatgactcctatgtgattgactatttcaaatcgctcggt
cagtacctgcactcgggcccacctgtctactttgtcctggaggaaggccataactacact
acccacaaagggcagaacatggtgtgcggcggcatgggctgtgacaatgactccctggtg
cagcagatatttaacgcagctgagctggacacctatacccgcataggctttgccccctca
tcctggattgacgattattttgactgggtcgcaccacagtcctcctgctgtagactctac
aacgccactcaccagttctgcaacgcttctgtgattgacccaacctgcatccgctgcaga
cctctgactccagagggcaaacagaggccacaggggaaggagttcatgaaatttctgccc
atgttcctttccgataaccccaaccccaaatgtggcaaaggaggacatgctgcttacagt
tcggctgttaacatcattggagatgacacttatgttggggccacttacttcatgacctac
cacacagtccttaagacctctgctgactacattgatgctatgaagaaagcccagcttata
gccagtaacatcacagaaaccatgaattctaaggggagtaactaccgcgtgttcccgtac
agtgtgttctacgtcttctacgaacagtacctgaccattattgatgacaccatctttaac
ctcagtgtatctctgggctccatatttctggtgaccttggtggttctgggctgcgaactg
tggtctgcagtcatcatgtgtgtcaccatagccatgatcctggtcaacatgttcggggtc
atgtggctgtggggcatcagtctgaatgctgtgtccttggtcaacctggtgatgagctgt
ggcatttctgtggagttctgcagccatataacgagagcgttcaccatgagtaccaaagga
agccgcgtgagccgagcagaagaggcgctggcccacatgggtagttctgtattcagtgga
atcacactcacaaaatttggagggattgtggtgttggcctttgccaaatctcaaattttt
gagatattttactttaggatgtacttagccattgtcttactcggagccactcacggactg
atatttcttcccgtcttactcagctacataggaccgtccgtaaataaagctaaaagacac
agcactcaagagcgatacaaagggacagagcgagaacagctgctcaacttttag
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integrated database retrieval system
