Mesocricetus auratus (golden hamster): 101840042
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Entry
101840042 CDS
T08306
Symbol
Col4a6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04151
PI3K-Akt signaling pathway
maua04382
Cornified envelope formation
maua04510
Focal adhesion
maua04512
ECM-receptor interaction
maua04518
Integrin signaling
maua04820
Cytoskeleton in muscle cells
maua04926
Relaxin signaling pathway
maua04933
AGE-RAGE signaling pathway in diabetic complications
maua04974
Protein digestion and absorption
maua05146
Amoebiasis
maua05165
Human papillomavirus infection
maua05200
Pathways in cancer
maua05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101840042 (Col4a6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101840042 (Col4a6)
04518 Integrin signaling
101840042 (Col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101840042 (Col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101840042 (Col4a6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101840042 (Col4a6)
09154 Digestive system
04974 Protein digestion and absorption
101840042 (Col4a6)
09158 Development and regeneration
04382 Cornified envelope formation
101840042 (Col4a6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101840042 (Col4a6)
09162 Cancer: specific types
05222 Small cell lung cancer
101840042 (Col4a6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101840042 (Col4a6)
09174 Infectious disease: parasitic
05146 Amoebiasis
101840042 (Col4a6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101840042 (Col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maua04147
]
101840042 (Col4a6)
00536 Glycosaminoglycan binding proteins [BR:
maua00536
]
101840042 (Col4a6)
Exosome [BR:
maua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101840042 (Col4a6)
Glycosaminoglycan binding proteins [BR:
maua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101840042 (Col4a6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101840042
NCBI-ProteinID:
XP_012977763
UniProt:
A0A1U8CPT9
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MHPGLWLFLVSLCLTKELAEAGQKISYGKSCGGQDCSGGCTCSPEKGARGRPGPIGTQGP
AGPKGFVGPTGLSGLKGERGSPGPLGPYGSKGDKGPMGVPGFVGLSGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFSGPDGYPGILGPPGLPGHKGSKGEPAPFQDSITGMKGDPGLPGLD
GMAGPSGSPGSPGDAGPIGPPGLQGPPGPAGPSGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGEKGSKGEPGPPGFPGMSGPPGFLEFGSIGEKGERGILGLPGPRG
SMGSEGVQGQPGRQGKKGTSGFPGINGFPGIKGEKGGIGLQGPDIFTDADGAVISGYPGD
PGMPGLPGLRGDEGIQGQRGPSGAPGLPSLTGLPGALGSEGFPGLKGDKGNPGRTTFGEA
GLPGKDGLPGLPGLPGPPGPPGRTFETGSLPSLETGFPGLQGERGPKGHQGLKGVKGDPG
FCACEGGAPNIGPHGEVGLPGTQGLIGLPGIKGTRGDPGSRGAPGPAGTPGLFGSRGHTG
LKGKKGEPAISRGSKLSGDKGDPGPQGIPGMAGAPGKDGIPGLPGFPGIQGDSGSGFPGE
KGSPGLPGEKGHDGPTGPPGIGLPGLPGPRGLPGDKGVNGLPGQQGLRGTQGVTLPCIIP
GSYGPSGFPGAPGFPGSKGARGLPGIPGKPGARGSKGEPGSPGLIHLPGLPGFPGPRGEK
GLPGFPGLPGKDGLPGKAGNPGLPGSKGATGDIFGAENGASGEQGLQGLPGDKGFPGDSG
LPGSKGLNGKSGMLGPKGERGNPGTPGAPGQPGPSGTSDPLGIKGTYGLPGAPGLPGIQG
QSGKKGQRGDIGQPGSTGKRGLPGIKGLPGSQGSTGFPGSPGLPGVTGLPGISGQKGERG
SSGPAGFPGLPGLPGIPGAGGLKGFPGSFGKVGQPGQAGTPGEKGDRGDPGSIGVSSPRP
PMLNLWFKGEKGSRGSAGSNGFSGPRGDKGEPGIPGLPGQPGAPGQSSTIKGLSGNPGSP
GSVGRIGLPGLKGSVGIAGFPGMPGKSGSQGRIGTSGPLGATGIPGLKGDQGQTLGISGS
PGPKGQPGELGFKGVKGKDGLAGDRGYPGNKGDDGKAGTAGDPGLPGSPGLQGISGMRGD
PGLPGSPGHLGSIGHPGPSGLIGPKGFSGPPGLHGLNGLPGTKGTHGTPGASVTGVPGPA
GLPGPKGEKGMPGIVIGDPGKQGPRGQKGDRGLPGLQGPAGPPGATGISLPSVIAGQPGD
PGRPGLDGERGRPGLPGPPGPPGPSSDQGDSGDPGFPGIPGLRGLKGNQGLPGLSGLSGD
LGLKGIKGEPGLMGTPGKVGPPGDPGFPGMKGKAGPRGFSGPQGAPGHTPISEAIQVPPG
PLGLPGIDGIPGLAGDPGPQGSVGLQGSKGLPGIPGKDGPSGLPGPPGILGDPGLPGLQG
PPGFEGTPGQQGPFGRPGMPGHSVRVGYTLVKHSQSEQVPLCPVGMSRLWVGYSLLFVEG
QEKAHNQDLGFAGSCLPRFSTMPFIYCNMNEVCHYARRNDRSYWLSTTAPIPMMPVGQTQ
IPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGTEGGGQSLVS
PGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERRQFREEPVSETLKTGQLHTR
VSRCQVCMKNL
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctggattgtggctgttcctggtttccttatgcctgaccaaagaactggcagaa
gcgggacagaagatatcctatggaaagtcatgtgggggccaagattgcagtggaggctgt
acttgctctcctgagaagggagcacgagggcgccctggaccaattggaactcaaggtcca
gcaggtcctaaaggatttgttggtcctactggtttatcagggttgaaaggagaaagaggt
tccccaggccctctaggaccatatggatcaaaaggagataagggtcccatgggagttcct
ggctttgttggcctcagtggaattccgggccaccctggacaaccaggacccagaggccca
cctggcctagatggctgtaatggaactcaaggagctgttggattttcaggccctgatggc
taccccgggattttaggaccacctgggctgcctggtcacaaaggttcaaaaggagaacct
gctccttttcaagacagcatcacaggaatgaagggggatcctgggctgcctggactagat
ggaatggctggtccatcaggatcccccggatctcctggagatgcaggacccataggacca
ccaggtttacaaggtcccccaggccccgctggaccttctggccctgatggaaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgtcggcctccctggccctgcagga
ccacctccttctactggggaactagaattcatgggattccccaaaggggagaaaggctcc
aagggtgaaccagggcctccaggtttcccaggcatgagtggccctccaggtttcctggag
tttggatctattggagaaaaaggagaaaggggaatccttggtttgccaggacctaggggt
tccatgggttcagaaggagtacaaggacagccggggagacagggaaagaagggcacttct
ggttttcctgggattaacggtttcccaggaattaagggtgaaaagggtggcattggtctg
caaggcccagacattttcaccgatgcagatggtgctgtgatttcaggttatcctggagac
cctggtatgccaggtctcccaggcctacgaggagatgaaggcatccaaggccaacgtggc
ccttctggcgcccctggtcttccatcattaacaggtcttcctggtgccctagggtctgag
ggatttccaggcctgaaaggagacaaaggaaacccaggacgcaccacctttggggaggct
ggcctacctggcaaagatggtttgccaggtttaccaggcctaccaggcccaccaggccca
cctggtcgcacatttgagactggatccttgcctagcctagagactggattccctggtcta
caaggagaaagaggtccaaaaggacatcaaggcctcaaaggagtaaaaggagaccctggg
ttttgtgcttgtgaaggtggggcccccaacattggaccacatggggaagtaggcctgcct
gggacacaaggtctcattggccttccaggtattaaagggactagaggagatccaggctct
aggggtgcacctggcccagcagggactccggggttatttggatctagaggtcatacaggt
ctcaaaggaaagaaaggagaaccagccatcagtagaggatcaaaactgtcaggagacaaa
ggtgaccctggtccccaggggattccaggcatggcaggagctccaggaaaggatggaata
ccaggtttgccaggcttcccaggcattcagggagatagcggatctggcttcccaggtgaa
aaggggtcaccaggacttcctggtgaaaagggacatgatggtccaactggaccaccagga
attggtctgccaggacttcctggaccccgtggacttcctggagataaaggagtaaatggg
ttgccggggcaacaaggcctccgtggaactcaaggagtcaccttgccttgtattattcct
gggtcatatggtccatcaggatttcctggagctcctggattcccaggctctaaaggagct
cggggcctccctggaattccaggcaagcctggtgctcgtggaagtaaaggagagcccgga
agtccgggattaattcatctcccaggactgccaggatttcctggacctcgtggggagaag
ggattgcctgggtttcctgggcttcctggaaaagatggcttgcctggaaaggctggcaat
ccaggtttaccaggttccaagggagccactggtgacatctttggtgccgaaaatggtgct
tcaggggagcaaggcctacagggattgccaggggacaaaggatttcctggagactctggc
cttccaggatccaagggtttgaatgggaagtctggtatgctaggccccaaaggtgagagg
ggtaaccctggaacaccaggagcaccaggacagccaggaccctcagggactagtgatcca
cttggcatcaagggcacatatggactcccaggagcaccaggccttccaggcattcaaggg
caatctgggaaaaagggtcaaagaggtgacataggtcaacccgggtcaactggaaaacga
ggtctacctggaataaaaggccttcctggttctcaaggttcaactggtttccctggaagc
ccaggtttgccaggagtcactgggttaccaggcatctcgggccaaaagggtgaaaggggg
tcctctggaccagcagggtttcctggcttacctggccttcctggtatccctggagctggt
ggattaaagggatttcccgggtcatttggaaaggtgggacaacctggacaggctggtact
ccaggtgaaaaaggagacagaggggatccagggtcaatcggcgtatccagtccaagacct
ccgatgctgaacctttggttcaaaggagaaaaaggctcccgaggttctgctggatccaat
ggattttctggacctagaggtgacaaaggagagcctggcatcccagggttaccaggccaa
ccaggagctcctggacagtctagtaccatcaaaggactcagtgggaacccaggttcccct
ggatctgtgggaagaattggattacccggcctgaaggggtccgtagggattgcaggtttc
ccaggaatgccgggaaagagtggttctcagggtcgcattggaacttctggccccctggga
gcaactggtatcccgggtttaaaaggagatcaaggccaaacacttggtatttctggaagt
ccaggacccaagggacagcctggtgaattaggctttaaaggtgtaaaaggaaaagatggg
ctagctggtgacagaggttacccaggaaacaaaggtgatgatggaaaagctggtactgct
ggagatcctggccttcctggctccccaggacttcaagggatttcaggtatgagaggagac
ccaggcctcccaggatcccctggccatttgggctccattggccaccctggaccttctggc
ttaataggacccaaaggattctctggacctcctggattacacggactgaatggacttcca
ggcaccaagggtacccatggaactccaggagccagtgtcactggtgttcctgggcctgct
ggcctgcctggtcccaaaggggaaaagggaatgccaggaattgtcatcggagatccagga
aaacaaggtccaaggggacaaaaaggtgaccgaggtctcccaggtctccaaggtcctgct
ggtccccctggagccacaggcatctccttgccctcagtcatagcaggacagcctggtgac
cccgggcgcccaggcctagatggagaacgaggccgcccaggccttccaggacctccaggt
ccccctgggccatcctcagaccaaggcgactctggagaccctggcttccctggaattcca
ggccttcgagggctcaagggaaaccaaggacttccagggctctctggcctctctggagat
ctagggctgaaaggcataaaaggggagcctggcctcatggggactccaggcaaggtcggg
ccaccaggagacccgggatttcctgggatgaagggaaaagcggggccaagaggcttttcc
ggcccccagggtgctccaggacacacaccaatttctgaagctatccaggttcctccgggg
cctttggggcttccgggcattgatggcatccctggcctcgcaggagaccctgggcctcaa
ggctctgtgggtctgcaaggttctaaaggtctacctggcatccctggcaaggatggcccc
agtgggcttccaggcccacctggaatccttggtgatcctggtctcccaggactacaagga
cctccaggatttgaaggaactccagggcagcagggtccctttgggaggcctgggatgcct
gggcacagtgtgagagtgggctacacactggtcaaacacagtcagtcagaacaggtgcca
ctgtgcccagtcggcatgagccggctgtgggtgggttacagcttgctgttcgtggagggg
caggagaaagcccataaccaggacctgggattcgctggctcctgcctgccccgattcagc
accatgcccttcatctactgcaacatgaatgaagtgtgccactatgccagacgcaatgat
agatcctactggctctctactacggcccccattcccatgatgcctgtgggccagacccag
attccccagtacatcagccgctgctctgtatgtgaggcaccctcacaagccattgccgtg
cacagccaagacatcaccatcccacagtgccctttgggctggcgcagcctctggatcggt
tactccttcctcatgcacactgctgccgggactgagggtggtggtcagtccctggtctcc
cccggctcctgccttgaggactttcgggccactcctttcatcgagtgcagcggcgcccgt
ggtacctgccactactttgccaacaagtacagcttctggctgaccacggtggaggagaga
cggcagtttcgggaagagcctgtttctgagacgctgaaaactgggcagctccacaccagg
gtgagccgctgccaggtgtgtatgaaaaatctgtag
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integrated database retrieval system