Mesocricetus auratus (golden hamster): 101840106 Help Entry 101840106         CDS       T08306                                  Symbol Col20a1 Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism maua  Mesocricetus auratus (golden hamster) Pathway maua04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:maua00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101840106 (Col20a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 VWA Collagen VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Motif Other DBs NCBI-GeneID:  101840106 NCBI-ProteinID:  XP_040588593 LinkDB All DBs Position Unknown AA seq 1363 aa AA seqDB search MSPRGSRLHFCLWMLGATLALGQGQVSGRLRLAVLPEDQLQMKWREAEGIGLGYLVQVTP MAGDLEQELILTTKTPKATVGGLNPSKGYTLQIFELTDSEPVLLARREFVIEDLKSHSLS RGSRRLVGPTLDPTSFPPGASDPEKTPDPSTAFTSSRDRPVLGVASKDQRKPKQSLGVQD PAQPTTDLERQSHTADSVGTQEKLGDPQFHCTPPTPTDIIFLVDGSWSIGHRHFQQVKDF LASIITPFEIGPDKVQVGLTQYSGDPQTEWDLNSFNTKEQVLAAIHSLRYRGGNTFTGLA LTHVLGQNLKPAAGARPEAAKVLILVTDGKSQDDVRTAARLLKDQDVDVFVVGVKNADEA ELKLLASQPLDITVHNVLDFPQLATLAALLSRLVCQKIQGRGPVKPAATTLALDPLPMMP TRLNLTHATSSSVHLSWTPALYPPLKYLIVWQPSRGGAPKEVVVEGPVSSMELRNLTSNT EYLVSVLPVYESGFGKSLQGRAITAPLPPPGALTLASVTPRTLRFTWQPSAGATQYLVRY LLIASPGEEQRREVLVGQPEVLLDGLEPGRDYEVSVQSLRGPEASEVRIVNARTAALGPP RHLSFSDVSYNSACVSWEAQRPVRLVKVSYVSSDGSHSGQAQVPGNATSATLGPLSSSTK YTVRVTSFYFGGGSSMLTGHVTTKKAPSPSQLSVMELPGDAVKLSWVAAALSGVLVYQIK WMPLGEGKAHEISVPGTRDTAVLPGLMGHVEYEITILAYYRDGTRSDPVSLRYVPSSASR SPPSNLVLSSETPNSLQVSWTPSSGHVLHYRVNYSLASGSGPEKSISVPGTRSHVTLPDL LSATKYRVLVSAVYGAGESVAASATCRTAACPALHPDSPLSGFDLMVAFGLVAKEYASIR GVAMEPSALGEAPTFTLFKDAQLMRRASDIYPATLPPEHTIVFLVRLLPETPREAFALWQ MVAEDFQPIVGVLLDAGRKSLTYFNHDPRAALQEVTFDLQDAKKIFFGSFHKVHVAVGHS KVRLYVDCRKVAERPIGDAGSPPTAGFITLGRLAKVRGPRSSSATFQLQMLQIVCSDTWA DKDRCCELPALRDGETCPASPSPCACSSETPGPPGPQGPPGLPGRNGTPGQQGHPGPKGE PGPPGQTGPEGPGGQQGSPGTQGRTVQGPMGPPGVKGEKGDHGLPGLQGLSGQQGIPGKT GLQGPKGMRGLEGPAGLPGPPGPRGFQGLAGARGSNGERGPPGAVGPTGLPGSKGERGEK GEPQSLAAIFQLVSQACESAIQTHVMKLNSFLHENARPPMPFMVETAKPSRPGSIEPPGS HNEALLPGDGGHVHHPEDQGEPEAISHISSPGLQERQAPEPLN NT seq 4092 nt NT seq  +upstreamnt  +downstreamnt atgagcccccgaggctcccgcctccacttctgcctctggatgttgggtgccactttggca ctggggcagggacaagtaagtggccgtctgcggttggcagtactgcctgaggaccagctg cagatgaagtggagggaagcagagggaatcggtcttggctacttggtgcaggtgacacct atggcaggggacttggagcaggagctgatattaaccaccaagacacccaaggccaccgtg ggtggcctgaacccttccaagggctacaccttgcagatctttgagctcactgactctgag cctgtcctgctggcacgaagggagtttgtgattgaggatctgaagagccactctctgagc agaggcagccgcaggctggtggggcccaccctggatccaacctccttccctcctggggcc tcagaccctgagaagacacctgatcccagtaccgcctttacctcaagcagagaccggcct gttcttggagtggccagtaaggatcagaggaaacccaagcagagccttggagtacaggac cccgctcagccaaccacagacctggagaggcagagccacacagcagactctgtgggaacg caagagaagctaggtgacccccagttccactgcacacccccaactcctactgatataatc ttcctggtggacggatcctggagcatcggccacagacacttccagcaggtcaaagacttc ctggccagcatcatcacaccgtttgaaataggaccagataaagtccaagtaggtctgact cagtacagtggagacccccagaccgagtgggacctgaactccttcaacaccaaggagcag gtgctggcagcaatacacagcctccgctacaggggaggaaacacattcacaggcctcgcc ctaacccatgtactggggcagaacctgaagccagcagcaggtgcccgtccagaggcagcc aaggtgttgattctagtgacagatggcaagtcccaggatgatgtgcgcacagctgcccga cttcttaaggaccaggacgttgatgtctttgttgtgggtgtgaagaatgcggatgaggct gaactgaagctcctggcatcccagccactggacatcactgtccacaatgtgctggacttc cctcagctggccaccttagctgctctgctcagccgcctcgtttgccaaaagatccagggc aggggcccagtcaaaccagcagccactactctggccctggaccccctccccatgatgccc accagactgaacctgacccacgccacctcatccagtgtccacctgtcttggactccggcc ttatacccacccctcaaatacctaattgtgtggcagccttctaggggtggtgcccccaaa gaggtggtggtggaggggcctgtctcatccatggagcttcgaaacctgacctccaacaca gaatacttggtctctgtgcttcctgtctatgagagtgggtttggcaagagcctacaaggc cgggcaatcacagcacccctgcctccacctggagcactgaccctggcttcagtgacacct agaacccttcgcttcacctggcagccctctgctggggccactcagtacttggtgcggtac ttgctgattgcctccccgggagaggagcagaggagagaggtactcgtgggacagcctgag gtactgctggatggcctggagccaggccgggactatgaggtttcagtgcagagccttcgg ggaccagaggccagcgaggtccggatcgtcaatgccaggaccgctgccctggggccccca agacacctgagtttctccgatgtgagctacaactcagcctgcgtgtcctgggaagcccag aggcctgtgcgcctggtcaaggtcagctatgtctctagtgacggcagccactctgggcag gctcaggttcctgggaatgctacctcagccaccctgggccccctttcctcctctaccaag tacactgtccgagtcaccagtttttactttgggggtggttcctccatgctgactggccat gtgaccacaaagaaagctcccagccctagccagctgtctgtgatggagctccctggagat gcagtcaagctgtcatgggtggcggctgccttgtctggtgtacttgtttatcagatcaag tggatgcccttgggagagggcaaggcccacgagatctctgtcccagggacccgtgacaca gccgtcttgccaggcctgatgggtcatgtggaatacgagatcaccatccttgcctactac agggacggcactcgcagcgaccctgtgtccctccgctatgtcccctcttcagcaagcagg agccccccgtccaatctggtcttgtcctcggagacccccaacagcctgcaggtcagctgg acaccatcaagtggccacgtcctacattaccgggtcaactattcactggcctcaggctct ggaccagagaaatccatctctgtgccaggcaccagaagccacgtcacacttcctgacctg ctgtctgccaccaagtacagggtcctggtctcagctgtctatggagccggggagagtgta gcagcgtctgccacgtgccgcacagcagcctgcccagccctgcacccggacagtcccctc tcagggtttgacctgatggtggcctttggtctcgtggcaaaggagtatgcctctattcga ggtgtggctatggagccctcagccttgggtgaggctcccaccttcacgctcttcaaggat gctcagctgatgcggcgagccagtgatatctacccggcaaccctgccaccagagcacacc attgtcttccttgtacgcctgctccccgagacaccccgagaagcctttgcgctgtggcag atggtggccgaggacttccagcccatcgttggagttctgctggatgctggcaggaagtct ctgacttacttcaaccatgatcccagggcagccttgcaggaggtcaccttcgacctgcag gatgcaaagaagattttcttcggaagcttccacaaggtacatgtggccgtgggccactcc aaggtcagactttacgtggattgtcggaaggtggctgagcggcctattggggatgctggc agcccacccacagctgggttcatcacactagggaggctagccaaggtcagggggccgagg agcagctcagccacgttccagctccaaatgttgcaaatcgtgtgcagtgacacctgggca gacaaggacaggtgctgcgaacttcctgcattgcgggatggagagacgtgcccagcctcc ccttccccctgtgcctgctcatctgagacccctgggccaccggggccccaaggccctccg ggcctccctggaaggaatggcactccaggacagcagggacacccggggcccaagggagaa ccaggaccacctggacagacaggacctgaagggcctggaggtcagcaggggtcaccaggg acgcagggacgcaccgtccagggacccatgggtcccccaggggtcaaaggagagaaggga gaccatggacttcctggcttgcagggcctctctggccagcaaggcatccccgggaaaact ggcctgcagggaccaaagggaatgaggggactggagggacctgctggactgcctggacca cctggccccaggggtttccagggtttggcaggggccagaggcagcaatggggagcgagga cccccaggggctgtggggcccacgggtctcccagggtccaaaggtgaacgaggagagaag ggagagccacagtcccttgccgccatcttccagctggtgagccaggcctgcgagtcagcc atacagacacatgtgatgaagctaaattccttcctccatgagaatgcccggcccccaatg cccttcatggtggagacggcaaagccaagcagacctgggtctatagagcctcctgggtca cataatgaggctctacttcctggagacgggggacacgtccaccatcctgaggaccaaggt gagcccgaagctatcagccacataagcagccctggactacaggagcgccaggccccagag cccctgaactga

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