Mesocricetus auratus (golden hamster): 101840309
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Entry
101840309 CDS
T08306
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04151
PI3K-Akt signaling pathway
maua04382
Cornified envelope formation
maua04510
Focal adhesion
maua04512
ECM-receptor interaction
maua04820
Cytoskeleton in muscle cells
maua04926
Relaxin signaling pathway
maua04933
AGE-RAGE signaling pathway in diabetic complications
maua04974
Protein digestion and absorption
maua05146
Amoebiasis
maua05165
Human papillomavirus infection
maua05200
Pathways in cancer
maua05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101840309 (Col4a5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101840309 (Col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101840309 (Col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101840309 (Col4a5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101840309 (Col4a5)
09154 Digestive system
04974 Protein digestion and absorption
101840309 (Col4a5)
09158 Development and regeneration
04382 Cornified envelope formation
101840309 (Col4a5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101840309 (Col4a5)
09162 Cancer: specific types
05222 Small cell lung cancer
101840309 (Col4a5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101840309 (Col4a5)
09174 Infectious disease: parasitic
05146 Amoebiasis
101840309 (Col4a5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101840309 (Col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maua04147
]
101840309 (Col4a5)
00536 Glycosaminoglycan binding proteins [BR:
maua00536
]
101840309 (Col4a5)
Exosome [BR:
maua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101840309 (Col4a5)
Glycosaminoglycan binding proteins [BR:
maua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101840309 (Col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101840309
NCBI-ProteinID:
XP_005082522
UniProt:
A0A1U7QN50
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MQVPEVCLAACWFLLALCLWGQPAEAAACHGCSSVSKCDCSGIKGQKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNQGYPGPPG
IQGPPGPKGISGPSGPPGPPGLMGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDLEFQKGDQGVPGDRGPPGPPGIPGPPGAPGGVKGEKGEPGEPGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRNGEKGQKGDIGPPGPPGLVIPTPGTGVTVGEKGN
IGLPGLPGEKGERGFPGIQGPPGFPGPPGTAVMGPPGPPGYPGERGQKGDEGPPGICIPG
SPGIDGQPGAPGLPGPPGPPGPHLQPSDEICKAGPTGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGSGISGPPGQPGLPGLPGPPGSHGFPGEKGEKGNAGTIGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLPGMKGDKGELGSPGAPGLPGLPGTPGKDGFPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNMGPMGPVGLGPPGPVGEKGIQGVAGNPGQPGLPGPKGDPGQTIT
QPGKPGLPGNPGRDGEMGLPGDPGLPGQPGLPGIPGSKGEPGVPGVGLLGPPGPKGFPGI
PGSPGAPGTPGRMGPDGPPGSPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPPGPPGRAGLDGLPGPKGDIGSNGQPGPIGPPGLPGIGIQGPPGPPGTPGPIGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGLPGTPGLIGPPGSPGLPGKAGVHGFPGAKGEIGM
MGPPGLPGPLGIPGRSGAPGLKGDDGMQGQPGLPGPAGEKGSKGEPGLPGPPGPIEPDFL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLIGQPGSPGLPGPKGNPGLPGPPGLT
GPPGLKGNIGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGSKGDPGISGIGLPGHPG
PKGEPGLPGYPGNPGIKGSVGDTGLPGLPGSPGAKGQPGLPGFPGTPGLPGPKGMSGLPG
NPGLPGEPGPVGGGGSPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGSPGTPGSPGLPGPKGEPGFQGFPGMPGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPPGFQGLPGSEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGFPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSMGPDGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGVPGQPGLKGPPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGA
RGLDGPPGPDGMQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcctgaagtgtgcctggccgcctgctggttcttactggccctgtgtctgtgg
gggcagcccgcagaggctgcggcctgccatgggtgttcttctgtatcaaaatgtgactgc
agtggtataaaagggcaaaagggagaacgaggatttccaggtttggaaggccatccaggt
ttgccaggatttccaggtccagaagggcctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggagctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccgggttccct
ggtttacaaggtcctccaggacctcctgggatcccaggtatgaagggggaaccaggtagt
ataatcatgtcatcactgccaggaccaaagggcaatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtatatcagggccaagtggtcctccaggaccacca
ggtttaatgggccctcctggtccgccaggcccaccaggaccaaaggggaatatgggctta
aatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcagggcccacctggtcca
cctggacagatcagtgaacagaaaagaccaatagatctagaatttcagaaaggagatcag
ggagttcctggtgatagagggcctcctggacctccaggaatacctggtcctccaggtgct
ccaggtggtgtgaaaggtgaaaagggtgagccaggagaaccaggcaaaagaggtaaacca
ggcaaagatggagagactggtcaaccaggaatcccaggtttgcctggtgatcctggttac
cctggtgaaccaggacggaatggtgaaaagggccaaaagggtgatattggcccacctgga
cctcctggactagtaattcctactcctgggactggtgtgactgtaggagaaaaaggaaat
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacaaggt
ccacctggctttcctggacctccagggacagcagtcatgggtcctcctggcccccctgga
tatcctggagaaaggggtcagaaaggtgatgaaggtccccctggaatttgtattcctgga
tctcctggaattgatggacagcctggggctcctggccttccagggcctcctggtcctcct
ggccctcatttgcaacccagtgatgagatatgtaaagcaggtcctacaggccccccagga
tctccaggtgataaaggactccaaggagagcaaggagtaaaaggtgacaaaggtgataca
tgcttcaactgtattggaagtggaatttcagggcctccaggccaacctggtttgccaggt
ctcccaggtcctccaggatctcatggattccctggagagaagggtgaaaaaggaaatgct
ggaacaattggtccaaaaggattacccggcatacctggacctccaggtgctccaggcttt
ccaggatctaaaggcgaccctggtgatgtcctcactcttccgggaatgaaaggtgacaaa
ggagagttgggttcccctggagctccagggcttcctggtctacccggtactcctggaaag
gatggatttccaggacttcctggccccaaaggagagcctggtggaattgcttttaagggt
gaaaggggtcctcctgggaacccaggtttgccaggtctcccaggaaatatgggacctatg
ggccctgttggtttggggcccccaggccctgtaggtgaaaaaggtatacaaggtgtggca
ggaaatccaggccaaccaggattaccaggtcctaaaggtgatccaggtcagaccataaca
cagccagggaagcctggcctgccaggtaatccaggcagagatggtgaaatgggccttcca
ggtgatcctggacttccaggccaaccaggcctgccaggaatacctggtagcaaaggagaa
ccaggtgtccctggggttggccttcttggaccaccaggtcccaaaggctttccaggaatt
ccaggatccccaggagcaccaggaacacctggaagaatgggtccagatggccctcctggg
tcaccaggctttccaggaccaaagggcgagccaggatttgggttacctggaccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgtgctggcttggatgggctaccaggaccaaaaggtgat
attggatcaaatggacaacctggcccaatagggcctcctgggctgccaggaattggtatt
cagggaccaccaggaccaccagggactccaggaccaataggccaacctggtttacatgga
ataccaggagagaagggagatccaggacctcctgggtttgatgttccaggacccccagga
gaaagaggtagtccagggcttcctggaacccctggtcttataggacccccaggatcacct
ggtctcccaggaaaagcaggtgtccatggattcccaggtgccaaaggagaaataggtatg
atgggacctccaggcctacctggacctttgggaattcctggcaggagtggtgctcctggc
cttaaaggtgatgatggcatgcaaggtcaaccaggtcttcctggtcctgcaggagaaaaa
ggtagtaaaggagaacctggccttccaggtcctcctggaccaatagaaccagatttcctg
ggatcaaaaggagagaagggtgagcctggcttaccaggtattcctggactctcaggacca
aaaggctaccagggtttgcctggagacccggggcaacctggattgattggacaacctgga
tcaccaggactgccaggtcccaagggtaaccctggtctcccgggtccaccaggacttaca
ggacctcctggacttaaaggaaacattggtgacatgggatttcctggccctcaaggtgta
gatgggccccctggacctcctggagttcctggacaacctggctctccagggttaccaggc
cagaaaggaagtaaaggagatcctggcatttcaggcattggtcttccgggtcatcccggt
ccaaagggtgaacctggtctgcctggatatccaggaaacccaggtatcaaaggttctgtg
ggagatactggtctgcctggattaccaggaagccctggagcaaaagggcagccaggcctg
cctggattcccaggaacccctgggcttcctggaccaaaaggtatgagtggtcttcctggt
aaccctggccttccaggagaacctggtcctgtaggtggtggagggagtcctgggccacca
ggacctcctggtgaaaaaggcaagcctggtcaagatggcattcctggaccagcagggcag
aagggagaaccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtcaaaagggagatggaggatcacctggcactccaggaagtcctggtcttccaggt
ccaaagggtgaaccaggctttcagggtttccctggtatgcctggtcccccaggtcctcct
ggttctcctggtccagctttggaaggtcctaaaggaaatcctggacctcaaggccctcct
ggaagaccaggtcccccaggtttccaaggtctaccaggttcagaaggtccccgtggtccc
cctggaaatggaggtattaaaggagagaggggaaacccaggcccacctgggcaacctggc
ttacctggcttgaaaggagatcaaggacctccaggatttccgggtaatcctggcaggcca
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggaatg
aaaggacccattggagtaccaggctcaatgggcccagatggggaaccaggccttactgga
ccaccaggtcctcctgggttacctggtccttcaggacagagcattataatcaaaggagat
gccggtcctccaggagttcctggccaacctggattaaaaggtccaccaggacttccaggc
cctcagggattaccaggtccaattggacccccaggagatccaggacgcaatggacttcca
ggttttgatggtgcaggagggcgcaaaggagacccaggtctgccaggacagccaggtgcc
cgtggattggatggtcccccaggaccagacggaatgcaaggacctccaggtccccctgga
accacttcggttgcccatggattcctcatcacacgccacagccagacaacagatgcacca
caatgcccacagggaacagtccatatctatgaagggttttctctcctgtatgtacaagga
aataaaagggcccatggtcaagacttggggaccgctggcagctgccttcgtcgattcagt
accatgccttttatgttttgcaacattaacaatgtttgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgagcatggaacccctgaagggc
cagagcatccagccattcattagtcgatgtgcagtatgtgaggcaccagctgtggtgatc
gcagttcacagccaaaccattcaaattccacattgtcctcaggggtgggactccctgtgg
attggttattccttcatgatgcatacaagtgcaggagcagaaggttcaggccaagcctta
gcctctccaggttcctgtttggaagaatttcgttcagctcccttcattgaatgtcatggg
cggggtacatgcaactactatgccaattcctatagcttttggctagccactgttgatatg
tcagacatgttcagtaaacctcagtcagagacactgaaagcaggagacttgaggacacgt
attagccgatgtcaagtatgcatgaagaggacataa
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integrated database retrieval system
