Mesocricetus auratus (golden hamster): 101842316 Help Entry 101842316         CDS       T08306                                  Symbol Ddx39b Name (RefSeq) spliceosome RNA helicase DDX39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism maua  Mesocricetus auratus (golden hamster) Pathway maua03013   Nucleocytoplasmic transport maua03015   mRNA surveillance pathway maua03040   Spliceosome Brite KEGG Orthology (KO) [BR:maua00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101842316 (Ddx39b)   09122 Translation    03013 Nucleocytoplasmic transport     101842316 (Ddx39b)    03015 mRNA surveillance pathway     101842316 (Ddx39b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:maua03019]     101842316 (Ddx39b)    03041 Spliceosome [BR:maua03041]     101842316 (Ddx39b) Enzymes [BR:maua01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      101842316 (Ddx39b) Messenger RNA biogenesis [BR:maua03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      101842316 (Ddx39b) Spliceosome [BR:maua03041]  Complex C   Other components    EJC/TREX     101842316 (Ddx39b)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     101842316 (Ddx39b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  101842316 NCBI-ProteinID:  XP_005086851 UniProt:  A0A1U7R640 LinkDB All DBs Position Unknown AA seq 428 aa AA seqDB search MAENDVDNELLDYEDDEVETAAGGDGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPITGQVSVLVMC HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKILNDVQDRFEVNISELPDEIDI SSYIEQTR NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atggcagagaacgatgtggacaacgagctcctggactacgaagacgacgaagtggagaca gccgcagggggagatgggaccgaggctcctgccaagaaagacgtcaagggctcctatgtc tccatccacagctcgggctttcgagacttcctgctcaagccagagttgctccgggccatc gtggactgtggctttgagcatccgtcagaggtccagcatgagtgcatccctcaggccatt ctggggatggacgtcctgtgccaggccaagtcgggcatggggaagacggccgtgtttgtc ctggccacgctgcagcagctggagccgatcacggggcaggtgtctgtgctggtgatgtgt cacactagggagctggcttttcagatcagcaaggaatatgagcgcttctcaaagtacatg ccaaatgtcaaggtggcggtgttttttggcggtctgtccatcaagaaggacgaggaggtc ctgaagaagaactgtccgcacatcgtcgtggggacgcctggccggattctagccctggct cggaacaagagcctgaacctgaagcacatcaaacactttatcttggacgagtgtgacaag atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccat gagaagcaggtcatgatgttcagtgctaccctgagcaaagagatccggccagtctgccgc aagttcatgcaagatcctatggagatcttcgtggacgatgagaccaagttgacgctgcac gggttgcagcaatactacgtgaaactgaaggacaacgagaagaaccggaagctctttgac cttctcgatgtcctcgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgatgc atcgccctggcccagcttctggtggagcagaacttcccagccattgctatccaccgtggc atgccccaggaggagaggctctctcggtatcagcagttcaaggatttccagcggcggatt cttgtggccaccaacctgtttggccgaggcatggacattgagcgtgtgaacatcgccttc aactatgacatgccagaggactcggacacctacctgcaccgggtggccagagcaggccgg tttggcaccaagggcttggccatcacatttgtatctgatgagagcgatgctaagatcctc aatgatgtgcaggaccgcttcgaggtcaacatcagcgagctccctgatgagatcgacatc tcctcctacattgagcagacacggtag

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