Mesocricetus auratus (golden hamster): 101842765
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Entry
101842765 CDS
T08306
Symbol
Prpf40b
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X8
KO
K12821
pre-mRNA-processing factor 40
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101842765 (Prpf40b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101842765 (Prpf40b)
Spliceosome [BR:
maua03041
]
Complex A
U1 snRNP components
U1 related factors
101842765 (Prpf40b)
Complex B
101842765 (Prpf40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
DUF4936
WW_2
DTW
Motif
Other DBs
NCBI-GeneID:
101842765
NCBI-ProteinID:
XP_005067273
UniProt:
A0A1U7Q9R5
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MQENGLMSCQEPGACSRACCASAVPLWQSGNSQNKDDLKGFVNWLSGLVLESRALQGSGW
GWVGNGAWKLPPELVFLFHPHPSASLLQVHLCAHPGSYDFSLPQQSVPDSGPRPPAAPAP
FPPGHPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQ
IPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNAD
DKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSQESRWTRPKDLDDLEALV
KQESAGKQQTQQLQTLQPQPQPPQPQPDPPPIPPGPIPVPMALLEPEPGRSEDCDVLEAA
QPLEQGFLQREEGPSSSTGQHRLPQEEEEARPEPERSGLSWSNREKAKQAFKELLRDKAV
PSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQH
FLEQHERMTSTTRYRRAEQTFGDLEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRR
NIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDQQLQNMDKEDALICFEEHIRALE
REEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANM
LGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRA
AALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEE
VRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSP
SVSRQGSESDEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGSGSPSSHL
LLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESEDREQEQEKDRELRQAEL
PNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaatgggctgatgtcatgccaagagccaggtgcctgtagtagagcctgctgt
gcctctgctgtgccactttggcaaagtggaaactcccaaaataaagatgacttgaagggc
ttcgtcaactggctttctgggctagtactagagagcagagctctgcagggctcaggctgg
ggctgggtaggaaatggggcttggaaactccctcctgaacttgtgtttctctttcatcct
catccctctgcttcccttctacaagtccatctctgtgcccatcctgggtcctatgacttt
tctctccctcaacagtcggttcccgattctggtccccggcccccagcagcgcctgccccc
ttcccaccggggcaccccatgatgccaccacccttcatgccccctccagggatcccacct
ccttttcctccgatggggctgccccctatgagtcagagaccaccagccattccccccatg
ccacctggcatactgcccccaatgcttccaccaatgggggcaccaccaccacttacacag
ataccaggaatggtacctccaatgatgccagggatgctgatgccagcggtgcctgtcact
gcagcgacggctccgggtgcggacaccgccagctctgctgtggctgggacaggccctccg
agggccttatggagtgaacatgtggcccctgatggacgcatctactactacaatgctgat
gacaaacagtcggtgtgggagaagcccagcgtgctcaagtccaaggcggagctgctgctg
tcccagtgtccctggaaagagtacaaatcagacacagggaagccgtattactacaacaac
cagagccaagagtcccgttggacccggcccaaggatctggatgacctggaggccctagtc
aaacaagagtctgcaggaaaacagcagacccagcaactacagacactacagccacagcca
cagccacctcagccacagcctgaccctccacctatacctcctggtcccatcccagtgcct
atggccctcctggaacctgagccaggtcgaagtgaagattgtgatgtattggaggctgcc
cagcccctggagcaggggttcctgcagcgggaggagggtcccagcagttctactggacag
catcgactaccacaggaagaggaggaagctaggccagaaccagagagatctggcctcagt
tggagcaaccgggaaaaagcaaaacaggccttcaaagagctgctgagggacaaggctgtc
ccttccaatgcttcgtgggaacaggccatgaagatggtagtcactgacccgcgttacagt
gccttgcccaaattgagtgaaaagaagcaggcatttaatgcttacaaggcacagcgggag
aaggaggagaaagaagaggcccggctgagggccaaggaggccaaacagaccctgcagcat
ttcctagagcagcacgaacgcatgacctccaccacccgctaccggcgggcagaacagacc
tttggggacctggaggtttgggctgttgtccctgagagggatcgaaaagaggtttatgat
gatgttctcttcttcctggctaagaaggagaaggaacaagcgaagcagcttcggcgtcga
aatatccaggccctgaagagcatcctggatgggatgagcagtgtcaacttccaaaccaca
tggtcgcaggcccagcagtacctcatggacaaccccagctttgctcaggaccagcaactg
cagaacatggacaaagaagatgcactgatctgctttgaggagcacatccgagctttagag
agagaggaggaagaagagcgggaacgggcccggcttcgggagcggcgccagcagcggaag
aaccgggaggcttttcagaccttcctggatgagttgcatgagacagggcagctgcattcc
atgtccacctggatggagctgtacccagcagtcagcactgatgtccgctttgccaacatg
ctgggccagccgggctctactcctctggacttattcaagttctatgtggaggagttgaag
gctcggttccatgatgagaagaagatcataaaggacattcttaaggaccggggcttctgt
gtggaggtgaacacagcctttgaggacttcgcccacgtcataagctttgacaagagggct
gctgcgctggacgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcggag
gcacgggagagggagcgggaaaaggaggaggcacgaaggatgcggcgcagagaagctgcc
tttcgaagcatgctgaggcaggccgtgcctgctctggagctgggcactgcctgggaagag
gtccgtgagcgctttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcgg
atccggctcttccgagagttcctgcaggtgctggagactgaatgccagcacctccacacc
aaaggccgaaagcatggcagaaagggcaagaaacaccatcgcaagcggtctcactcaccc
tcagtgagtcggcagggctctgagtcagatgaagaggaactgcccccaccatccctccgg
ccccccaagcggaggaggcggaacccctcagagtctggctctgagccctcatcctcactt
gattcagttgaaagtgggggtgctgcccttggaggatcaggctccccatcctcccacctt
ctccttgggtcggatcatggtcttcggaaagccaagaaacccaaaaagaaaactaagaag
agaagacacaagtcgaacagtcctgagagtgagacggaccctgaagaaaaagctggcaag
gagagtgaagacagagaacaagaacaggaaaaggacagggaactccggcaggcagagctc
cctaaccgctctccaggctttggaatcaagaaggagaagacaggctgggacacatcggaa
agtgagctgagtgagggggagctggagagacgaaggcggacactcctacagcagctggat
gaccaccaatga
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