Mesocricetus auratus (golden hamster): 101844147
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Entry
101844147 CDS
T08306
Symbol
Atxn2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua05014
Amyotrophic lateral sclerosis
maua05017
Spinocerebellar ataxia
maua05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101844147 (Atxn2)
05017 Spinocerebellar ataxia
101844147 (Atxn2)
05022 Pathways of neurodegeneration - multiple diseases
101844147 (Atxn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101844147 (Atxn2)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101844147 (Atxn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
101844147
NCBI-ProteinID:
XP_040587326
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All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MHPSTVAAQRPAAGPQPRRLSVWAARRSLPRSARRGGRGGAATYPSAGPPPRGPGAPPRG
PRSPPCASDCFGSNGNGASRSGSRRLFGVCGPPRPFVVVLLPLAPATAPARACPLGVRAS
PPCSGVSSARSAPGCPRPAYEPVYGPLTMSLKPQPQPQPPAPASGRKPGSGLLSSPGAAP
ALAASSSSSSVPAPAAPVASSSAATGGGRPGLGRGRNSNKGLSQPTISFDGIYANVRMVH
ILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILF
KCSDFVVVQFKDTDSSYARRDAFTDSAVSAKVNGEHKERDLEPWDAGELTASEELEALEN
DVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIES
SAQYKARVALENDDRSEEEKYTAVQRNCSEREGHGTSTRENKYIPPGQRNREVISWGSGR
QSSPRMGQPGPGSMPSRAASHTSDFNLNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSG
PNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPASTVPKRMSSEGPPRMSPKAQRH
PRNHRVSAGRGSISSGLEFVSHNPPSEAAAPPVARTSPAGGTWSSVVSGVPRLSPKTHRP
RSPRQNSIGNTPSGPVLASPQAGIIPTEAVSMPVPAASPTPASPASNRALTPSIEAKDSR
LQDQRQSSPARNKENIKASETSPSFPKADSRGMSPVVSEHRKQIDDLKKFKNDFRLQPSS
TSDSMDQLLSKNREGEKSRDLMKDKIEASAKDAFVDNSSSNCTSGSSKTNSPSISPSVLS
NTEHKRGPEVTSQGVQTSSPACKQEKDDREEKKDAAEQVRKSTLNPNAKEFNPRSFSQPK
PSTTPTSPRPQAQPSPSMVGHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMP
VNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPS
QPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQFGAHEQTHAMYACP
KLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGNHPAP
SPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQSSFPAAQQTVFTI
HPSHVQPAYTTPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQP
IPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgtcgaccgtcgccgctcagcggcccgcggcgggcccgcagccgcgccgcctg
tcggtttgggccgcgcggcgctcgctcccgcgatcggcgcggcgcggcgggcggggcggc
gcggcgacgtatccctccgccggccctcccccgcgcggccccggcgcccctccccgcggg
ccgcgctcgccgccctgcgcctcagactgttttggtagcaacggcaacggcgcgtcccgg
tccggctcccggcggctgttcggtgtctgcgggcctccccgccccttcgtcgtcgtcctg
ctgcccctggctcccgcgaccgcgccagcccgcgcctgcccgcttggcgtccgcgcgtcc
ccgccgtgctccggcgtctcctcagcgcgctcggctcccggctgtccccgcccggcgtac
gagccggtgtatgggccgctcaccatgtcgctgaagccgcagccgcagccgcagccgccc
gcgcccgccagtggccgcaaacccggcagcggcctcctctcgtcgcccggcgccgcgccg
gccttggccgcgtcgtcctcgtcttcctccgtgccggccccggccgcgccggtggcatct
tcctcggctgccacgggcggcgggcgccccggcctgggcagaggtcggaacagtaacaaa
ggactgtctcagcctacgatttcttttgatggaatctatgcaaacgtgaggatggttcat
atacttacatcagttgttggatcaaaatgtgaagtacaagtgaaaaatggaggtgtatat
gaaggagtttttaaaacatacagccctaagtgtgatttggtacttgatgctgcacatgag
aaaagtacagaatccagttcggggccaaaacgtgaagaaataatggagagtattttgttc
aaatgctcagacttcgttgtagtacagtttaaagatacagattccagttacgcacgaaga
gatgcttttaccgactctgctgtcagcgccaaagtgaatggtgagcacaaggagagggac
ctggagccctgggatgcaggggagctcacagccagtgaggagctggaggcactggagaat
gatgtgtctaatggatgggatcccaacgatatgtttcgatataatgaagagaattacggt
gtagtgtccacatacgacagcagtttgtcttcatatacggttcccttagaaagagataac
tcagaagaatttctaaaacgggaggcaagggcaaaccagctagcagaggaaattgaatcc
agtgctcagtacaaagctcgtgtggcccttgagaatgatgaccggagtgaagaagaaaaa
tacacagcggtccagagaaactgcagtgagcgggagggacatggcacaagtactagggaa
aataaatatattcctcctggacaaagaaacagagaagtcatatcctggggaagtgggaga
cagagctcaccccggatgggccagcctggaccaggctccatgccttcaagagctgcttct
cacacctcagacttcaacctgaactctggttcagaccaaagagtagttaatggaggtgtt
ccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggt
cccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcg
aggccatccagacccccgtctcacccctctgctcatggttctccagctcctgcctctact
gtgcctaaacgcatgtcttcagaaggccctccaaggatgtctccaaaggcgcagcggcac
cctaggaatcacagagtctctgctgggagaggctccatatctagcggcctagaatttgta
tcccacaaccccccaagtgaagcagctgctcctccagtggcaaggaccagtcctgcaggg
ggaacgtggtcttcagtggtcagtggggttccaaggttatctcccaaaactcacagaccc
aggtctcccaggcagaacagtattggaaacactcccagtgggcctgtgcttgcttctccc
caagctggcatcatccctactgaagcagtttccatgcctgttccagctgcatctcctact
cctgccagccctgcatccaacagagctctgacaccatctattgaggctaaagattccagg
cttcaagaccagagacagagctctcctgcaaggaataaggaaaatattaaagcaagtgaa
acatcacccagctttccaaaagctgacagcagaggtatgtcaccagttgtttctgaacat
agaaaacagattgatgatttgaagaagtttaagaatgattttaggttacagccaagttct
acatccgattctatggatcaacttctaagcaaaaatagagagggagaaaagtcacgagat
ttgatgaaagataaaattgaagcaagtgctaaggatgctttcgttgacaacagtagcagc
aactgtaccagtggcagcagcaagaccaacagccccagtatctccccttctgtgctgagt
aacacagagcataagaggggacctgaggtcacatcccaaggggtgcagacttccagccca
gcctgcaaacaagagaaggatgaccgagaagagaaaaaagacgcagctgagcaagttagg
aagtcaacattgaatcccaatgcaaaggagttcaaccctcgttccttttctcagccaaag
ccttctactaccccaacgtcaccccggccacaagcacaaccaagcccatcaatggtgggt
catcagcagccagctccagtgtacacacaacctgtttgttttgcaccaaatatgatgtat
ccagtcccagtgagcccaggcgtgcaacctttatatccaattcctatgacgcccatgccg
gtgaaccaagccaagacatatagagcaggtaaagtaccaaatatgccccagcagcgacaa
gaccagcatcatcaaagcaccatgatgcaccccgcctcagcagcaggcccacccattgta
gccaccccgcccgcttactccactcagtacgttgcctacagccctcagcagtttcccagt
cagcctctagttcagcatgtgccgcattatcagtctcagcatcctcatgtgtacagccct
gtcatacagggtaatgccagaatgatggcaccaccagcacatgcacagcctggtttagta
tcttcttcagcaactcagttcggggctcatgagcagacgcatgcaatgtatgcatgtccc
aaattaccatacaacaaggagacaagcccttctttctactttgccatttccacgggctcc
cttgctcagcagtatgcacatcctaatgccaccctgcatccacatactccccatccccag
ccttcggccactcccactggacagcaacaaagccagcatggtggaaatcatcctgcaccc
agtcctgttcagcaccatcagcaccaagctgcccaagctcttcatctggccagtccacag
cagcagtcagccatttaccacgcggggctggcaccaaccccaccttccatgacacctgcc
tctaatacacagtctccacagagcagcttcccagcagcccagcagacggtcttcaccatc
catccttctcatgttcagccggcatataccacccctccccacatggcccacgtacctcag
gctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgcta
atgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacagccc
attccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtacaagcccac
caccaacagcagttgtaa
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