Mesocricetus auratus (golden hamster): 101844568
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Entry
101844568 CDS
T08306
Symbol
Col1a1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04151
PI3K-Akt signaling pathway
maua04510
Focal adhesion
maua04512
ECM-receptor interaction
maua04611
Platelet activation
maua04820
Cytoskeleton in muscle cells
maua04926
Relaxin signaling pathway
maua04933
AGE-RAGE signaling pathway in diabetic complications
maua04974
Protein digestion and absorption
maua05146
Amoebiasis
maua05165
Human papillomavirus infection
maua05205
Proteoglycans in cancer
maua05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101844568 (Col1a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101844568 (Col1a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101844568 (Col1a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101844568 (Col1a1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101844568 (Col1a1)
09152 Endocrine system
04926 Relaxin signaling pathway
101844568 (Col1a1)
09154 Digestive system
04974 Protein digestion and absorption
101844568 (Col1a1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101844568 (Col1a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101844568 (Col1a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101844568 (Col1a1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
101844568 (Col1a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101844568 (Col1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
maua00536
]
101844568 (Col1a1)
Glycosaminoglycan binding proteins [BR:
maua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101844568 (Col1a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
101844568
NCBI-ProteinID:
XP_005075907
EnsemblRapid:
ENSMAUG00000019272
UniProt:
A0A1U7QKK9
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MFSFVDLRLLLLLGATALLTHGQEDIPEITCIHDGVKIPNGETWKADTCLICICHNGTAV
CDAVVCQEKLDCVNPQTREGECCPFCPEEYVSPDQELIGVEGPKGDRGPQGPRGPAGPPG
KDGIPGQPGLPGPPGPAGPPGPPGLGGNFAPQMSYGYDEKSAGVSVPGPMGPSGPRGLPG
PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRAGERGPPGPQG
ARGLPGTAGLPGMKGHRGFSGLDGAKGDTGPAGPKGEPGSPGENGAPGQMGPRGLPGERG
RPGAPGPAGARGNDGATGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARGSEGPQGVRG
EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAPGPKG
NSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPG
SRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDG
KTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEPGKAGERGVPGPPGPAGPAG
KDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG
PSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPG
ERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAG
PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGETGTKGDSGPPGPAGPAGPPG
PIGNVGAPGPKGARGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRG
ETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERG
FPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPG
PKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPAGARGPAGPQG
PRGDKGETGEQGDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGPAGPRGPPGSAGAPG
KDGLNGLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGPPGPPSGGYDFSFMPQPSQEKSHD
GGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKS
GEYWIDPNQGCNLDAIKVFCNMETGQTCVFPIQPTVPQKNWYISPNPKENKHVWFGESMT
DGFQFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSIAYMDQQTGNLKKSLLLQ
GSNEIELRAEGNSRFTYSTLVDGCTSHTGSWGKTVIEYKTTKTSRLPIIDVAPLDIGAPD
QEFGFDVGPACFV
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttaggggccactgccctcctgacg
catggccaagaagacatccctgaaatcacctgcatacacgatggcgtaaagatccccaat
ggtgagacgtggaaagccgatacctgcttgatctgtatttgccacaatggcacggccgtg
tgcgatgccgtggtgtgccaggaaaagttggactgtgtcaacccccaaacccgtgaaggg
gagtgctgtcctttctgtccagaagagtatgtatcaccagaccaagaactcataggagtc
gagggacccaagggagaccgcggccctcaaggcccaaggggacccgctggcccccctgga
aaagatggcatccctggacagcctgggcttcctggtcctcctggtcctgctggtcccccc
ggcccccctggcctcggaggaaacttcgcgccccagatgtcctatggctatgatgagaaa
tctgctggagtttccgtgcctggccccatgggtccttctggtcctcgtggtctccctggt
ccccccggtgcacctggtcctcagggtttccaaggcccccctggtgaacctggcgagcct
ggcgcttcaggtccaatgggtccccgtggtccccctggccctcctggcaagaacggagat
gatggggaagctggtaaacctggccgtgctggtgagcgtggacctcctgggccccagggt
gctcggggattgcctggaacagctggcctccctgggatgaagggacacagaggtttcagc
ggtttggatggtgccaaaggagatactggtcctgctggccctaagggagagcctggcagt
cctggtgaaaatggagctcctggccagatgggtccccgaggtctgcctggtgagagaggt
cgccctggagcccctggccctgctggtgctcgtggaaacgatggtgctactggtgcagcc
gggcccccgggtcccactggccccactggccctcctggattccctggtgcagttggtgct
aagggtgaagctggtccccaaggagcccgaggctctgaaggtccccagggtgttcgtggt
gagcccggaccccctggccctgctggtgctgccggccctgctggaaaccccggtgctgac
ggacaacctggtgctaaaggtgctaatggtgctcctggtattgctggtgctcctggcttc
cctggtgcccgaggcccctctggaccccagggccctagtggagctccaggtcccaagggt
aacagcggtgaacctggtgctcctggcaacaaaggagacactggtgccaaaggagagccc
ggccctgctggtgttcaaggtccccctggccctgctggggaagaaggaaaacgaggagcc
cgtggcgaacctggacctactggcctgcccggacctcctggcgagcgtggtggacctggc
agccgtggtttccctggtgctgatggtgttgctggccccaagggccctgctggtgaacgt
ggttctcctgggcctgctggtcccaaaggttctcctggcgaagctggtcgtcctggtgaa
gctggtctccctggtgccaagggtctcactggcagtcctggcagccctggtcctgatggc
aaaaccgggccccctggtcccgctggccaagatggtcgccctggacccgcaggtcctcct
ggagcccgtggccaggctggtgtgatgggattccctggacctaagggtactgctggagaa
cccggaaaggctggagagcggggtgttcctggaccccctggccctgctggccctgctggc
aaagatggagaagctggagctcagggagcccccggccctgctggtcctgctggtgagaga
ggtgagcaaggtcctgctggctcccctggattccagggtctccctggccctgctggtcct
cctggtgaagcaggaaagcctggtgaacagggtgttcctggagaccttggtgcccctggt
ccctctggagcaagaggcgagagaggtttccctggtgagcgcggtgtacaaggtccccca
ggtcctgctggtccccgtggaaacaatggtgctcctggcaatgatggtgccaagggtgat
actggtgcccccggagctcccggtagccagggtgctcctggtcttcagggaatgcctggt
gaacgtggtgcagctggtcttccaggtcccaagggtgacagaggtgatgctggtcccaaa
ggtgctgatggctctcctggcaaagatggcgtccgtggtctgactggtcccattggtcct
cctggccctgctggtgcccctggtgacaagggtgaaactggccccagtggtcctgctggc
cccaccggagcccgtggtgcccccggagaccgtggtgagcctggcccccctggtcctgct
ggttttgctggcccccctggtgctgatggccaacctggtgctaaaggtgaacctggtgaa
accggtactaaaggcgactccggtcctcctggccccgctggacctgcgggaccccccggc
cccattggtaacgtcggtgctcctggacccaaaggtgctcgtggtgctgctggtccccct
ggtgctactggtttccctggtgctgctggccgcgttggtccccctggtccctctggaaat
gctggaccccctggccctcctggtcctgttggcaaagaaggaggcaaaggtccccgtggt
gagactggtcccgcgggacgtcctggtgaagttggtcccccaggtccccccggccctgct
ggtgagaaaggagcccctggtgctgatggacctgctggctctcctggtacccctggacct
cagggtattgctggacagcgtggtgtggttggtcttcctggtcagagaggagaaagaggc
ttccctggtcttcccggcccctctggtgaacctggcaaacaaggtccttctggatcaagt
ggtgaacgtggtccccctggccccatgggcccccctggattagctggcccccctggtgaa
tctggacgtgagggatctcctggtgctgaaggctcccccggaagagatggcgctcctggc
cccaagggtgaccgtggtgagactggccctgctggcccccctggtgcccctggtgctcct
ggtgctcctggccctgttggacctgctggcaagagtggcgatcgtggtgagaccggtcct
gctggtcctgctggtcccattggccctgctggtgcccgtggccctgctggaccccaaggt
ccccgtggtgacaagggtgagactggcgaacaaggtgatagaggcataaagggtcatcgt
ggcttctccggtctccagggtcctcctggctctcctggctctcctggtgaacaaggtccc
tctggagcttctggtcctgcaggtccccggggtccccctggctctgctggtgctcctggc
aaagatggactcaacggtctccctggtcccattggtccccctggtcctcgaggtcgcact
ggtgatagcggtcctgctggtccccccggccctcctggaccccccggccctcctggtcct
cccagtggtggttatgacttcagcttcatgcctcaaccatctcaagagaagtctcatgat
ggcggccgctactaccgggctgatgatgccaatgtggtccgtgaccgtgaccttgaggta
gacaccaccctcaagagcctgagccagcagattgagaatatccgaagccctgaaggcagc
cgcaagaaccccgcccgcacatgccgtgacctcaagatgtgccactctgactggaagagc
ggagagtactggattgaccctaaccagggctgcaacctggatgccatcaaggtcttctgc
aacatggagactggtcagacctgtgtgttccccattcagcccactgtgccccagaagaac
tggtacatcagcccgaaccccaaggaaaataagcatgtctggttcggcgagagcatgact
gatggattccagttcgagtatggaagtgaaggctccgaccctgctgatgttgccattcag
ctgaccttcctgcgcctgatgtccactgaggcctcccagaacatcacctaccactgcaag
aacagcatagcctacatggatcaacagactggcaacctcaagaagtccctgctcctccag
ggctccaatgagatcgagctcagggccgagggcaacagtcgctttacctacagcaccctt
gtcgatggctgcacgagtcacaccggaagttggggcaagacagtcatcgaatacaaaacc
accaagacctcccgcctgcccatcattgatgtggcgcccttggacattggtgccccagac
caggaattcggatttgatgttggccctgcctgcttcgtgtaa
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integrated database retrieval system
