Mesocricetus auratus (golden hamster): 106021697
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Entry
106021697 CDS
T08306
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua01524
Platinum drug resistance
maua03430
Mismatch repair
maua05200
Pathways in cancer
maua05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106021697 (Msh6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106021697 (Msh6)
09162 Cancer: specific types
05210 Colorectal cancer
106021697 (Msh6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
106021697 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maua03400
]
106021697 (Msh6)
DNA repair and recombination proteins [BR:
maua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106021697 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
106021697
NCBI-ProteinID:
XP_040594871
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFSKSPALRDTKKAAAGASREGAAVPGASASRGGDAAWSEARSESRPAAVS
ASSPEAKSLNGRLRSSAAPAAPDSNSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
RKKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRAD
EALTKDKVKRLELAVCDEPSEPEEDEETEAPAASVSDTSEKDQSDSEEEPQPKTQGPRRS
SRQVKKRRVISDSESDADGSDVEFKPDTKHEGSSEEEMSSGLGDSDSEGMGTFGKGAPKR
KRTVAGHSAFRRKASRKETPPATKRATQISSEAKSTLSAFSAPANSESQAHVSGGGDDSG
GPTMWYHETLDWLKPEKRRDEHRRRPDHPDFNSSTLHVPEDFLNSCTPGMRKWWEIKSRN
FDLVIFYKVGKFYELYHMDAVVGVNELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKV
ARVEQTETPEMMEARCRRMAHVSKFDRVVKREICRIITKGTQTYGVLEGEPSENYSRYLL
SLKEKEEDASGHTRVYGVCFVDTSLGKFFMGQFPDDRHCSRFRTLVAHYPPVQILFEKGN
LSAETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFPEKSEGSGAVLPEVLKR
MTSESDSVGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDTVMTVR
PGALFTTASRRMVLDAVTLNNLEIFLNGTNGSAEGTLLERLDTCHTPFGKRLLKQWLCAP
LCSPRAISDRLDAVEDLMALPDKVAEVADLLKKLPDLERLLSKIHNIGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSTLEGFKVVCKIIGLMEDVADSFKSKTLRRVVTLQTKNPEGR
FPDLSAELNRWDTAFDHEKARKTGLITPKAGFDADYDQALADIKENEQSLLEYLDKQRSR
IGCRTIVYWGIGRNRYQLEIPENFVTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDMSLKDCMRRLFHNFAKNYKDWQSAIECIGVLDVLLCLANYSQGGDGPMCRPVILL
PGEDTHPFLELKGSRHPCVTKTFFGDDFIPNDILIGCEEEAEENGKAYCVLVTGPNMGGK
STLIRQAGLLAVMAQLGCYVPAEECRLTPVDRVFTRLGASDRIMSGESTFFVELSETASI
LRHATAHSLVLVDELGRGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKNV
SVRLGHMACMVENECEDPSQETITFLYKFIQGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKINQSLRLFREVCLASERPTIDAEAIHRLLALIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcaccctgtacagcttcttctccaagtccccggcgctcagggacacc
aagaaggccgcggccggagcctcccgcgaaggcgccgccgtccccggggcctccgcttcc
cgcggcggggatgcggcctggagcgaggctagatccgagtcccggcccgcggcggtgtcc
gcctcgtcgcccgaggcgaagagcctcaacgggaggctgcggagctcggccgcgccggcc
gctccggacagcaacagttcttgtgacttctcaccaggcgatttggtttgggctaagatg
gaaggttacccttggtggccttgcctggtttataatcatccctttgatggaacattcatc
cggaagaaagggaaatcggtccgtgttcatgtccagttttttgatgacagtccaaccagg
ggctgggttagcaaaaggctgttaaagccatatacaggttcaaagtccaaggaagcccaa
aagggaggtcatttctacagttcaaagtctgaaatactcagagcaatgcaacgcgcagat
gaagccttaactaaagacaaggtcaagaggcttgagttggcagtttgtgatgagccttca
gagccggaggaggatgaagagacagaggcgcctgcagcctctgtgtctgacacgagtgaa
aaagaccagagtgacagtgaagaggagccgcagcctaagacgcaggggcctcgtaggagc
agccggcaggtcaagaagcgaagggtcatatctgactcggagagtgacgctgatggctcg
gacgtagagttcaagccggacacgaagcatgagggaagcagtgaggaggaaatgagcagt
gggcttggagacagcgatagtgaaggcatgggcacctttggcaagggtgctccaaagcgg
aagagaacagtggcaggtcacagtgccttcagaaggaaagcttcaaggaaggaaaccccc
ccagccaccaaacgagcaactcagatttcctcagaagccaagagtaccttgagcgccttt
tctgctcctgcaaattctgaatcccaggcccacgtcagtggaggaggcgatgacagcggt
gggcccactatgtggtatcatgaaactttagactggcttaagccagaaaagagaagagat
gagcacaggagacggcccgatcaccccgactttaattcttccacactccatgtgcctgaa
gatttccttaactcctgtaccccagggatgaggaagtggtgggagattaagtctcggaac
tttgatcttgtcattttttataaggtggggaagttttacgaattgtaccacatggacgct
gttgttggagtcaatgagctggggctggtgttcatgaagggcaactgggcccactctggc
tttccggaaattgcatttggccgattttcagattccttggtgcagaagggctataaagta
gcacgggtggagcagactgagaccccagaaatgatggaggcgcgatgccggaggatggcc
catgtatccaagttcgatcgagtggtgaaaagggagatttgcaggatcattaccaagggc
acacagacttacggggtgctggaaggcgagccctctgagaactacagtaggtaccttctt
agccttaaagagaaggaggaagatgcttctggtcacactcgtgtatatggtgtgtgcttc
gttgacacgtcactgggcaagtttttcatgggtcagtttccagatgatcggcattgttcc
agatttaggacactcgtggcacactatcctcctgtacaaattttgtttgagaagggaaac
ctctcagcagaaaccaaaacagtcctgaaaggttcactgtcctcttgtcttcaggaaggc
ctgataccaggttctcaattttgggatgccactaagactttgagaacactgcttgaagga
ggatattttcctgagaagtcagaaggcagtggtgcggtactccctgaggtgcttaaaaga
atgacctcagagtcagactctgttggcctgacaccaggggagaagagtgaattggccctc
tctgctctaggtggttgtgttttctacctcaaaaaatgcctgattgaccaggagcttctg
tcaatggctaattttgaagaatacgttcccctggattctgacacggtcatgacagtaaga
cctggtgctctcttcaccacagccagtcggcgaatggtactagatgcagtgacattaaac
aacttggagattttcctgaatgggacaaatggctctgctgaagggaccctgctagagagg
ctcgatacgtgccatactccctttggcaagcggctcctgaaacagtggctttgtgctccc
ctctgtagcccccgtgccatcagtgaccgtttagacgccgtggaagacctgatggctttg
cctgacaaggtcgctgaagtcgcagacctcctaaagaagctcccagatcttgagaggcta
ctgagtaagatccacaacattggatctcccctgaagagccagaaccacccggacagcagg
gctataatgtacgaagaaaccacatacagcaaaaagaagatcatcgattttctgtctact
ctagaaggattcaaagtagtctgtaagattatagggcttatggaggatgtcgctgacagt
tttaagtctaaaaccctcaggcgggttgttactctccagacaaaaaatcccgaagggcgc
tttcctgatctgagtgcagagctgaaccgatgggatacggcttttgaccatgagaaggct
cggaagactggactcatcactcccaaggcaggctttgacgccgattatgaccaagcactt
gctgacatcaaggagaatgaacagagcctcctggagtacttggataagcagcgcagtcgc
attggctgcaggaccatagtctactggggaattggtaggaaccgctaccagttggagatt
ccagagaattttgttacccgtaatttaccggaagaatatgagttaaaatctactaaaaag
ggctgtaaacgatactggaccaaaacaattgagaagaaattagctaatcttataaatgct
gaagaacgtagggacatgtctttgaaggactgcatgaggcggctgttccataactttgct
aaaaattacaaggactggcagtctgctatagagtgcattggagtgttggatgttttactg
tgcctggctaactatagtcaaggaggagatggtcctatgtgtcgcccagtaattctgtta
ccaggagaagacacacaccccttcctagagcttaaaggttcacgacatccctgtgttaca
aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagaa
gcagaagaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaaa
tctacactcataagacaggctggtcttttggctgtaatggcccagctgggctgttatgta
cctgctgaagagtgtcggctcacaccggtagatagggtgtttaccagacttggtgcctca
gacaggataatgtcaggtgaaagtacattttttgttgagttgagcgaaactgctagcata
cttaggcacgcaacagcacattctttggtgcttgtggatgaattaggaagaggcactgca
actttcgatgggacagccatagccagtgcagttgtcaaagaacttgctgaaactataaag
tgtcgaacattgttttctacacactatcattcattagtagaagactattctaaaaatgtt
tctgtgcgcctaggacacatggcttgcatggtagagaacgagtgtgaggaccccagccag
gagactatcaccttcctctacaagttcatccagggagcgtgtcccaagagctacggcttc
aatgcagcaaggctggccaatcttccagaggaagtcattcaaaagggacacaggaaagca
agagaatttgagaagatcaatcagtcattacgactatttcgggaagtttgtctggctagt
gaaaggccaactatagacgctgaagctatccataggctgctggctttgattaaggaattg
tag
DBGET
integrated database retrieval system
