Mesocricetus auratus (golden hamster): 106022240
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Entry
106022240 CDS
T08306
Symbol
Hmgb1
Name
(RefSeq) high mobility group protein B1 isoform X1
KO
K10802
high mobility group protein B1
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03410
Base excision repair
maua04140
Autophagy - animal
maua04217
Necroptosis
maua04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106022240 (Hmgb1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106022240 (Hmgb1)
09143 Cell growth and death
04217 Necroptosis
106022240 (Hmgb1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
106022240 (Hmgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maua03036
]
106022240 (Hmgb1)
03400 DNA repair and recombination proteins [BR:
maua03400
]
106022240 (Hmgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maua04147
]
106022240 (Hmgb1)
Chromosome and associated proteins [BR:
maua03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
106022240 (Hmgb1)
DNA repair and recombination proteins [BR:
maua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106022240 (Hmgb1)
MMR (mismatch excision repair)
Other MMR factors
106022240 (Hmgb1)
Exosome [BR:
maua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106022240 (Hmgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
106022240
NCBI-ProteinID:
XP_040607328
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MVFLTGLDNQFTTDTENHLNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSE
FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS
AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA
AYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggttttcttgaccggtttggacaatcaattcacaacagacacagaaaatcatctaaac
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggaacacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctcgaagaagtgctcagaaaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagacatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gctttcttcttgttctgttctgagtatcgcccaaaaatcaaaggagaacaccctggtttg
tccattggtgatgttgcaaagaaactgggagagatgtggaacaacactgctgcagatgac
aagcagccctatgaaaagaaggctgccaagctgaaggagaagtacgaaaaggatattgct
gcttacagagctaaaggaaaacccgatgcagcgaaaaagggggtggtcaaggcagaaaag
agcaagaaaaagaaggaagaagaagatgatgaggaagatgaagaggatgaggaagaggag
gaagaagaggaagacgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system
