KEGG   Mesocricetus auratus (golden hamster): 121138088
Entry
121138088         CDS       T08306                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua03013  Nucleocytoplasmic transport
maua04150  mTOR signaling pathway
maua05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:maua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121138088
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    121138088
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121138088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maua03019]
    121138088
   04131 Membrane trafficking [BR:maua04131]
    121138088
Messenger RNA biogenesis [BR:maua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121138088
Membrane trafficking [BR:maua04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    121138088
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C AtcB_N
Other DBs
NCBI-GeneID: 121138088
NCBI-ProteinID: XP_040596838
UniProt: A0ABM2X233
LinkDB
Position
Unknown
AA seq 217 aa
MAMFVAHSIAGNHKDLIHDVSFDFHGRRMTTCSSDQSVKVWDKXESGDWHCTASWKTHSG
SVWRVTWAHPEFGAVLASCSFDRTAAVWEEIVGESHDKLRGQSHWVKRTTLVDSRTSVTD
VKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSRQHEISCKLSCSCISWNPSSSGAH
SPMIAVGSDDSSPNTMAKGQIFEYNENTRKYFLPPSA
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccatgtttgtggcgcacagcatcgcggggaaccacaaggacctcatccatgatgtg
tcttttgacttccacgggcgccggatgaccacctgctccagtgaccagagtgtcaaggtc
tgggataaanttgaaagtggagattggcattgtactgctagttggaagacacatagtgga
tctgtatggcgtgtgacatgggctcatcctgaattcggagcagttttggcttcctgttct
tttgaccgaacagcagctgtttgggaagaaatagtaggagaatcacacgataaacttcga
gggcagagtcactgggtgaagaggacaactctagtggatagtagaacatctgttactgat
gtgaaatttgctcccaaacatatgggtctcatgttagcaacctgttcagcagacggtata
gtaagaatatatgaggccccagatgttatgaatctcagccagtggtctcgacagcacgag
atctcatgtaagctgagctgtagctgtatttcttggaacccttccagctctggtgctcac
tcccccatgatcgccgtgggaagtgatgacagcagtccaaacacaatggccaagggtcag
atttttgagtataatgaaaacaccaggaaatattttctccctccctctgct

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