Mycolicibacterium aubagnense: MAUB_00340
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Entry
MAUB_00340 CDS
T07121
Symbol
topoM_1
Name
(GenBank) topoisomerase subunit TopoM
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
maub
Mycolicibacterium aubagnense
Brite
KEGG Orthology (KO) [BR:
maub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maub03032
]
MAUB_00340 (topoM_1)
03400 DNA repair and recombination proteins [BR:
maub03400
]
MAUB_00340 (topoM_1)
Enzymes [BR:
maub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MAUB_00340 (topoM_1)
DNA replication proteins [BR:
maub03032
]
Prokaryotic type
DNA Topoisomerases
MAUB_00340 (topoM_1)
DNA repair and recombination proteins [BR:
maub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MAUB_00340 (topoM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBX82161
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All DBs
Position
complement(26041..28173)
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AA seq
710 aa
AA seq
DB search
MTVIEQNPDLVLNQSAEDYWNRYQLTFALYSVSDRAIPSAFDGLKPGQRRLLYQMHSSRL
LPGNKPQKSSKVCSAVTGNLHPHGGASMYGAAALMAAEFQRVKVIDGQGAFPRIQGDIPA
ADRYTEMRLSAPGAALTAELDSHAVPMVDTFDGEWTEPVVLPARFPVLLCNGAVGIAEGW
ATKVPAHNPREVMAACRALLADPNLSDDALMELLPGPDWGCGATVVGSDGLREYVTTGRG
AFTVRGTLSVDGKNVVITELPPGVASSTVQDRIRALVEGGELPGVVDMSDLTDRRNGLRI
VVTIKRGHDPAQVRDQLLALTPLESTFAASLVALDGDRVPRWWSVRELISAFLSLRDSVV
VRRSEYRLNKVVARRHLVAGLLAIHLDIDAAVTVIRGSDTVDDAREGLQARFSIDAEQAD
HVLALQLRKLTRLDVVELQSEAQKLDEEFAQLNELLSSADARRAVIDTELVSTAKLFDAA
EFDRRTALDSDATPVFSGTDDDGGRERKVNSSWRLDDRGVFSDSHGELISSGVGWAVWTD
GRVKFTDGKGLPFKTRDIPVAPDITGLVSSGVIAPGAHLALVTRRGKVLRIDPSTINPQG
VAGNGVSGVKLTAGDSGDSVLAALPLTGTPGEAILSISEKGWKVTDAADIPVKGRGGAGV
WFHPFVADEDALVSATASSAGFSRGGRAVRAENRAKASVKGTAAEITPAT
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcatcgaacagaacccggacctggtactcaaccagagcgccgaagactactgg
aatcggtaccagttgacgttcgcgctctacagcgtcagcgaccgcgccatcccctccgcg
ttcgacggactcaagccgggccagcgtcgattgctataccagatgcactcgtctcgattg
ctgcccggcaacaagccacagaagtcctccaaagtctgctcggctgtcaccggcaatctg
cacccgcacggcggcgcgtcaatgtatggcgccgcggcgctgatggccgccgagttccag
cgcgtgaaagtcattgacggacagggcgccttcccccgaatccaaggcgacatcccagct
gccgaccggtacaccgagatgcggctatccgcgccgggagctgccctgaccgccgaactc
gatagtcacgcggtgccgatggtggacactttcgacggagaatggactgaacccgtcgtt
ctgccggcgcggtttccagtcctactgtgcaatggtgccgtcggcatcgccgaaggctgg
gccaccaaggtgcccgcgcacaatccgcgtgaagtgatggcggcgtgccgcgcactgctg
gctgacccgaacctgtccgatgacgcgctgatggagcttctgcccggccccgactggggt
tgtggcgccacggtggtcggctcggacgggctgcgcgagtacgtcaccaccggcaggggt
gcattcaccgtgcgcggcacgctgtcggtcgacggcaagaacgtggtgatcactgaactt
cctcccggcgtggccagttccactgtgcaggaccgaatccgggcattggtcgaaggcggc
gaattgccaggggtggtcgacatgtccgatctgaccgaccgccgcaacgggctgaggatc
gtcgtcaccatcaaacgcggacatgaccctgcacaggtccgcgaccagctgctggcgctt
accccgttggagtcaacattcgccgcgagcttggtggctctcgatggggaccgggttccg
cgctggtggtcggtccgcgagctgatctccgcattcctgtctcttcgtgattcggttgtt
gtgcgccgcagtgaatatcgcctgaacaaggtggttgcgcgccggcatctggtagccggc
ctgctggcgatccacctcgacatcgatgctgcggtcacggttattcgcggctccgacaca
gtcgacgatgctcgcgagggcctgcaagcgcggttcagcatagatgcggagcaggccgat
cacgtgcttgcgctgcagctgcgcaagctgactcgacttgacgtagtcgaattgcagtcc
gaggcgcagaagctcgacgaagagttcgcacagctcaatgagctgctgtcttcagctgat
gcacgtcgagctgtgatcgacaccgaactggtgtcgaccgcaaaactcttcgacgcagct
gaatttgatcgccgaacagctttggattctgacgcaactccggtgttctccggcacagat
gacgacggcggtcgtgagcgaaaagtcaactcctcctggcgacttgacgaccggggcgtt
ttctccgacagccacggcgagttgatctcgtccggggtgggctgggcggtgtggaccgac
ggccgggtcaagttcaccgacggcaaagggctgccgttcaagacacgcgacattcccgtc
gccccggacatcacgggtctagtcagctccggcgtcatcgcccctggagcgcatctggcg
ctggtcacccgccgcgggaaggtactgcgcatcgatccgtcgacgataaacccccagggt
gttgccggcaacggagtgtccggcgtgaagctcacagctggcgattcgggggattcggtg
ttggcggcactgccgctcactggaacacctggcgaggcgatcctgtcgatttccgagaag
ggctggaaagtaaccgatgccgccgacatcccggtcaaaggccgcggtggtgccggtgtt
tggttccatccgttcgtcgctgacgaagacgctctggtctctgcaacggcatcttccgca
ggtttctcgcgcggtggtcgcgctgtacgcgccgagaatcgggcgaaagcatccgtgaaa
ggcactgctgcagaaatcactccggcgacatga
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