KEGG   Mycolicibacterium aubagnense: MAUB_02020
Entry
MAUB_02020        CDS       T07121                                 
Name
(GenBank) alternative sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
maub  Mycolicibacterium aubagnense
Brite
KEGG Orthology (KO) [BR:maub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maub03021]
    MAUB_02020
Transcription machinery [BR:maub03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MAUB_02020
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 MarR HTH_23 HTH_3 HTH_Crp_2 MarR_2 HTH_24 DUF7343 DUF7437 Sigma70_ECF
Other DBs
NCBI-ProteinID: BBX82329
LinkDB
Position
187587..188447
AA seq 286 aa
MSIRLVEEDSREVGEPADAGASEESGPTTGRRESEDEYGDVITMIAVLRKMPTDSDSYAR
QHERIVLRCCPLADRVARHFDRRGENLEDLTQVARVGLLQAINRFDPDRGSRFIAFALPT
MMGELRRYFRDYGWKVHVPRRIRDRQHDIACATAFLTNDLRRAPTIEELADALDIDRGQV
VESIVAAKAYQPQSLDVNVSDDDPRSLMLGDFLGELDAGFDRVTDRESVKSLLAALPARE
QKVLYLRYFGAMTQRQIADSIGVSQMHVSRILDRTLRDLRAQVGCC
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtcaatccgtttggtggaagaagattcccgtgaagtcggcgaaccggcagatgccggc
gcatcggaggaatcggggccgacgactggacggcgcgaaagtgaagacgagtacggagac
gtcatcaccatgatcgcggtgctgagaaagatgcccactgattcggactcctacgcccgc
cagcatgaacggatcgtcctgagatgttgcccgctggcggaccgggtggcgaggcatttc
gaccgccggggcgagaatctcgaagatctgacgcaggtcgcgcgcgtcggactgctgcag
gcgatcaatcggttcgatcctgatcgagggtcgagatttatcgcgttcgcgctgccgacg
atgatgggtgagttgcgccggtacttccgagactatggctggaaagttcacgtgcccagg
aggattcgtgatcgacagcatgacatcgcctgcgccaccgcatttttgaccaatgacctc
aggagagcgccaaccatcgaagaactggccgacgcgctggacatcgaccgtggtcaggtc
gtggagagcatcgtggcagccaaggcgtatcagccacagtcgctcgacgtgaatgtcagc
gatgacgacccgcgatcgctgatgctcggcgacttcctcggcgagctggatgccgggttc
gatcgtgtcaccgatcgggagtcggtgaagtccctgctggccgccctgcctgcgcgggag
cagaaggtgctgtacctgcgttacttcggtgccatgacacagcggcagattgccgactcg
atcggcgtttctcagatgcacgtgtcccggatattggaccgtacgttgcgggacttgcgg
gctcaggtcggctgttgctga

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