KEGG   Mycolicibacterium aubagnense: MAUB_05890
Entry
MAUB_05890        CDS       T07121                                 
Symbol
rpoE_1
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
maub  Mycolicibacterium aubagnense
Brite
KEGG Orthology (KO) [BR:maub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maub03021]
    MAUB_05890 (rpoE_1)
Transcription machinery [BR:maub03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MAUB_05890 (rpoE_1)
SSDB
Motif
Pfam: DUF6596 Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE TPR_2 TPR_7 HTH_23 TPR_14 TPR_8 HTH_AsnC-type HTH_10 TPR_12 HTH_28 TPR_1 HTH_38
Other DBs
NCBI-ProteinID: BBX82716
LinkDB
Position
601076..602269
AA seq 397 aa
MFRREYGRAVAVLIRRFGDIDLAEEAVQDAFTKAVDRWPQAGPPPSPAGWIITTAAHTIV
DRFRRESVRGERHAQAALLYPVADDELLEEGPVRDDHLRLIFICAHPALSLEARVALTLR
LLGGLSTKEIARAFLISETTVAQRLVRAKRKIRDAHIPYRVPHDSDLPERVHGVLAVAYL
IFNEGHTASSGEDLVRADLTGEAVRLGRLLAELMPDEPEVLGLLALMLLTDARRAARTDS
AGNLVLLADQDRSRWDRGLVAEGQTLVRRCLRRNRPGPYQIQAAINAVHSDAPTASATDW
CQILALYDQLMAIAPTPVVALNRAVALAEVAGPQAALDLVEALDLKDYHVYHVVRASLLS
RLGRTAEAAEAYDRATALATNPVERAHLRRTRDALDA
NT seq 1194 nt   +upstreamnt  +downstreamnt
gtgttccggcgagagtacgggcgagcggtggcggtcctgatccgtcgattcggcgatatc
gacctcgccgaggaggcggtccaggacgccttcaccaaggcggtggaccgctggccacag
gccggcccaccgccgagccccgccggatggatcatcaccaccgccgcacacacgatcgtc
gaccggttccgccgagaatcggttcgaggcgagcggcacgcgcaggcggcactgctctat
ccggtggccgatgacgagctgctcgaagagggccctgtgcgcgacgaccacctacgcctg
atcttcatctgcgcacaccccgccctgtccctcgaggcccgggtcgcactcacgctgcga
ttactcggcggcctgtccaccaaggagatcgcccgcgccttcctgatctcggaaacgact
gtcgcgcaacgacttgtccgcgccaaacgcaagatccgcgacgcgcacatcccgtaccgg
gtcccgcacgacagtgacctgccggagcgtgtgcacggggtgctcgccgtggcgtacctg
atcttcaacgaggggcacactgccagctcaggagaggatctcgtgcgggccgatctcacc
ggcgaggccgttcggctcggccgactgctggcagagctgatgcccgacgagcccgaggtg
ctggggctgctcgccctgatgctgctgaccgacgcgcgacgcgcggctcgcacagactca
gcggggaatctcgtcctgctggccgaccaggaccggagccggtgggaccgcggcctggtc
gccgaggggcagacgctggtccgccggtgcctgcgacgaaatcggccggggccctatcag
atccaggccgcgatcaacgccgtgcacagtgacgcgccgactgcctccgctacggactgg
tgccaaatcctcgcgctgtacgaccagctgatggcgatcgccccgactcccgtcgtcgcg
ctcaatcgcgccgtggcgctcgccgaggtagcgggcccgcaggcggcgctggatctggtg
gaagcgctcgacctcaaggactatcacgtctaccacgtggttcgtgcctcgcttctgtcc
cgcctcggtcgaacagccgaagcagccgaggcctacgaccgggccaccgctttggccacc
aacccggtcgagcgggcgcacctgcgccgcactcgcgacgcgttggacgcttga

DBGET integrated database retrieval system