Mycolicibacterium aubagnense: MAUB_05890
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Entry
MAUB_05890 CDS
T07121
Symbol
rpoE_1
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
maub
Mycolicibacterium aubagnense
Brite
KEGG Orthology (KO) [BR:
maub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maub03021
]
MAUB_05890 (rpoE_1)
Transcription machinery [BR:
maub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAUB_05890 (rpoE_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
TPR_2
TPR_7
HTH_23
TPR_14
TPR_8
HTH_AsnC-type
HTH_10
TPR_12
HTH_28
TPR_1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
BBX82716
LinkDB
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Position
601076..602269
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AA seq
397 aa
AA seq
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MFRREYGRAVAVLIRRFGDIDLAEEAVQDAFTKAVDRWPQAGPPPSPAGWIITTAAHTIV
DRFRRESVRGERHAQAALLYPVADDELLEEGPVRDDHLRLIFICAHPALSLEARVALTLR
LLGGLSTKEIARAFLISETTVAQRLVRAKRKIRDAHIPYRVPHDSDLPERVHGVLAVAYL
IFNEGHTASSGEDLVRADLTGEAVRLGRLLAELMPDEPEVLGLLALMLLTDARRAARTDS
AGNLVLLADQDRSRWDRGLVAEGQTLVRRCLRRNRPGPYQIQAAINAVHSDAPTASATDW
CQILALYDQLMAIAPTPVVALNRAVALAEVAGPQAALDLVEALDLKDYHVYHVVRASLLS
RLGRTAEAAEAYDRATALATNPVERAHLRRTRDALDA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgttccggcgagagtacgggcgagcggtggcggtcctgatccgtcgattcggcgatatc
gacctcgccgaggaggcggtccaggacgccttcaccaaggcggtggaccgctggccacag
gccggcccaccgccgagccccgccggatggatcatcaccaccgccgcacacacgatcgtc
gaccggttccgccgagaatcggttcgaggcgagcggcacgcgcaggcggcactgctctat
ccggtggccgatgacgagctgctcgaagagggccctgtgcgcgacgaccacctacgcctg
atcttcatctgcgcacaccccgccctgtccctcgaggcccgggtcgcactcacgctgcga
ttactcggcggcctgtccaccaaggagatcgcccgcgccttcctgatctcggaaacgact
gtcgcgcaacgacttgtccgcgccaaacgcaagatccgcgacgcgcacatcccgtaccgg
gtcccgcacgacagtgacctgccggagcgtgtgcacggggtgctcgccgtggcgtacctg
atcttcaacgaggggcacactgccagctcaggagaggatctcgtgcgggccgatctcacc
ggcgaggccgttcggctcggccgactgctggcagagctgatgcccgacgagcccgaggtg
ctggggctgctcgccctgatgctgctgaccgacgcgcgacgcgcggctcgcacagactca
gcggggaatctcgtcctgctggccgaccaggaccggagccggtgggaccgcggcctggtc
gccgaggggcagacgctggtccgccggtgcctgcgacgaaatcggccggggccctatcag
atccaggccgcgatcaacgccgtgcacagtgacgcgccgactgcctccgctacggactgg
tgccaaatcctcgcgctgtacgaccagctgatggcgatcgccccgactcccgtcgtcgcg
ctcaatcgcgccgtggcgctcgccgaggtagcgggcccgcaggcggcgctggatctggtg
gaagcgctcgacctcaaggactatcacgtctaccacgtggttcgtgcctcgcttctgtcc
cgcctcggtcgaacagccgaagcagccgaggcctacgaccgggccaccgctttggccacc
aacccggtcgagcgggcgcacctgcgccgcactcgcgacgcgttggacgcttga
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