Mycolicibacterium aubagnense: MAUB_16350
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Entry
MAUB_16350 CDS
T07121
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
maub
Mycolicibacterium aubagnense
Pathway
maub03420
Nucleotide excision repair
maub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAUB_16350
03430 Mismatch repair
MAUB_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maub03400
]
MAUB_16350
Enzymes [BR:
maub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAUB_16350
DNA repair and recombination proteins [BR:
maub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAUB_16350
MMR (mismatch excision repair)
Other MMR factors
MAUB_16350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBX83762
LinkDB
All DBs
Position
complement(1655073..1658339)
Genome browser
AA seq
1088 aa
AA seq
DB search
MTYSPADLAEALGLFTPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGYAT
PSQVLGLTFTRKAAGQLLRRVRTRLARLAGSGLLPGVSLADEHATVSTYHAFAGTLLREY
GLLLPIEPATRLVTETEMWQLAFRVVSDYPGRLQTDKSPAAITQMVLRLAGQLSEHLVDT
DAVRDTHHELERLIHTLPAGPGQRGGPTQWLLNLLATQTERAELVPLIDAVHQRMRDAQV
MDFGSQMSAAARLVERHPQVGAQLRARYRVVLLDEYQDTGHAQRVALSSLFGGGVDDGLA
LTAVGDPIQSIYGWRGASATNLPRFTTDFRRSDGSPAPTLELRTSWRNPPRALKLANAVS
AEARRRSVSVRELLPRPGAEPGTIQCALLDDVVAERDWVADHLARRYHSAVTAGEPAPTA
AVLVRRNADAAPIAEALTARGVPVEVVGLAGLLAIPEVADVVAMLRLVAEPTAGVAAMRV
LTSARWRFGAADLAALWRRASELDVPDAARTSGSAAEQAINKAIAQVAPDADHACLADAI
SDPGPADRYSPEGHRRLLALAAELSQLRAHLHQPLPDLVAEVRRVLGIDAETRAASGVSE
GWRGTEHLDAFADVVAGYAARPAGDADASAPIVGLLAYLTAAAEVENGLAPAQVTVASDR
VQILTVHAAKGLEWQIVAVPHLVARVFPSTASQRTWLTDAGDLPPLLRGDRAELSEHGVP
VLDTSDVNDRKVLADKIAAHKALLDQRRTDEERRLLYVALTRAEDTLLLSGYHWGTTAAK
PAGPSDFLVEMRDIIERAAAEGDPCGEIEQWAAAPPDSAVNPLRDNVIECSWPVDPAGSR
RADVDRGAALVAQALAAGTEESAEDPHGWSADVDALLAERARSQERGPLELPPQLSVSAL
VDLGSDRSGALQRLQRRLPSRPDPQALLGTAFHDWVQRYFSAERLFDLDDLPGAVDAELG
QSVAEELADLQAAFALSAWAARTPIDIEVPFDMVLGDRVIRGRIDAVFADADGGYTVLDW
KTGDPPTTPETLRTKAIQLAVYRLAWSSIQGVPVDSVRAVFHYVRAGQTVAPTDLPAADE
LAALMRVG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
gtgacatacagccccgccgaccttgccgaggcgctcgggctgttcacccccaccgacgag
caggccgcggtcatcgccgccccaccgggaccgctggtggtgatcgccggtgccggcgcc
ggcaaaaccgagaccatggccgcgcgggtggtctggctggtggccaacggctacgccacc
ccgtcgcaggtgctggggctgaccttcacgcggaaagctgccggacagctgctgcgccgc
gtgcgtacccggctggcgcggcttgccggttcgggcctgttgcccggcgtttcgctggcc
gacgagcacgcgaccgtcagcacgtatcacgccttcgccggcaccctgctccgcgagtac
gggctgctgctgcccatcgaaccggccacccggctcgtcaccgaaaccgaaatgtggcag
ttggcttttcgggtggtgtccgattacccggggcggttgcagaccgacaagtccccggcc
gccatcacccagatggtcctgcgcctggccggccagctgtccgagcacctcgtcgacacc
gatgctgtccgggacacccaccacgagctggaacggctcatccacacgctcccggcggga
ccgggccagcgcggtggccccacgcagtggctgctgaatctgctggcgacccagaccgag
cgcgccgagctggtgccactcatcgacgccgtgcaccagcggatgcgggacgcgcaggtg
atggacttcggcagccagatgtccgccgcggcccgcttggtggagcgtcacccacaggtc
ggcgcgcagctgcgggcacggtatcgcgtggtcctgctcgacgagtaccaggacaccggg
cacgcccagcgggtcgcgctgtcgtcgctgttcggcggcggggtcgacgacggcctggcg
ttgacggcggtgggggacccgatccagtccatctacgggtggcgcggcgcgtcggccacc
aacctgccccggttcaccaccgacttccggcgctcggacggctcgccggccccgacgctc
gaactgcggaccagctggcgcaacccaccgcgggctctgaaactggccaacgcggtgtcc
gccgaggcccggcgccgcagcgtgagtgtgcgcgaactgctaccgaggccgggcgccgag
ccggggaccatccagtgtgcgttgttggatgatgttgtcgccgaacgtgattgggtggct
gaccacctggcccgccgctaccacagtgccgtgacggccggcgaaccggcgcccacggcg
gccgtcctcgtacgccgtaacgccgatgccgcgcccatcgctgaggcgctgacggcacgt
ggtgtacccgtcgaagtcgtcggcctggccgggctcttggccatccccgaggtggccgac
gtggtcgcgatgctgcgcctggtcgccgaaccgaccgccggggtcgccgcgatgcgggta
ctcaccagcgcgcggtggagattcggcgccgccgacctggccgcgctgtggcgtcgcgct
tcggaactggatgtccccgatgccgcgcggacgtccgggtcggctgccgagcaggccatc
aacaaggcaatagcccaggttgcgcccgatgccgaccacgcctgcctggccgacgccatc
agcgaccccggtccggccgaccgctactcgccggagggccaccgccggctgctggccctg
gccgccgaactgagccagctgcgcgcacatctgcatcagccgctgccggacctggtcgcc
gaagtgcgacgggttctgggcatcgacgccgaaactcgcgctgccagtggcgtttccgag
ggttggcgggggaccgagcacctcgatgcattcgccgatgtggtcgccgggtacgcggcc
aggccggccggcgacgccgacgcgtcggcgcccatcgtcggactgctggcgtatctgacc
gccgccgcggaggtggagaacgggctggcaccggcacaggtgacggtggcctcggaccgg
gtgcagatcctgacggtgcacgcggccaaggggctggagtggcagatcgtcgcggtgccg
catctggtggcccgggtgttcccgtccactgcgtcgcagcgcacctggttgaccgacgcg
ggcgacctaccgccgctgctgcgcggcgaccgtgccgagctgtccgaacacggggtgccg
gtgctcgacacgtccgacgtcaacgaccggaaggtgttggcggacaagatcgccgcgcac
aaggccttgctcgatcagcggcggaccgatgaggagcggcgcctgctctacgtggccctc
acccgtgccgaggacaccctgctgttgtccgggtaccactgggggacgacggccgcgaaa
ccagctgggccctccgacttcctggtcgagatgcgcgacatcatcgaacgcgcggcggcg
gaaggcgacccgtgcggcgagatcgagcagtgggccgccgcgccacccgacagcgccgtc
aacccgttgcgggacaacgtcatcgaatgctcatggcccgtcgacccggccggttcccgc
cgggcggacgtcgaccggggtgcggccctggtcgcccaggcgctggccgccggcaccgag
gaaagcgccgaggatccccacggttggtccgccgacgtcgatgccctgctggccgaacgc
gcgcggagccaggagcgcggtccactcgagctgccgccgcaactgtcggtcagcgcgttg
gtcgacctgggcagcgaccggtccggcgcactgcaacggctgcagcggcggctgccgtcc
cgaccggacccgcaggcgctgttgggcaccgcgtttcatgactgggtgcagcggtacttc
tcggcagagcggctgttcgacctcgacgacctgcccggtgcggtcgacgccgagctgggg
cagtccgtcgccgaagaactggcagacctgcaggccgcgttcgccctgtcggcgtgggcg
gcccgtaccccgatcgacatcgaggtgccgttcgacatggtgctcggcgatcgcgtgatc
cgcggccgcatcgacgcggtgttcgccgacgccgacggtggctacaccgtgctggactgg
aagaccggtgatccgccgaccactccggaaaccttgcgcaccaaggcgattcagctggcg
gtgtaccggctggcctggtcgtcgatccagggcgtgcccgtcgactcggtgcgggcggtc
ttccactacgtgcgcgccgggcagacggtggcacccaccgacctgcccgccgcggacgag
ctggcggcgctaatgcgcgtcgggtga
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