Mycolicibacterium aubagnense: MAUB_46080
Help
Entry
MAUB_46080 CDS
T07121
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
maub
Mycolicibacterium aubagnense
Pathway
maub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAUB_46080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maub03021
]
MAUB_46080
03019 Messenger RNA biogenesis [BR:
maub03019
]
MAUB_46080
Transcription machinery [BR:
maub03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MAUB_46080
Messenger RNA biogenesis [BR:
maub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MAUB_46080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
VWA_2
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BBX86735
UniProt:
A0ABN5YXV7
LinkDB
All DBs
Position
4755429..4757417
Genome browser
AA seq
662 aa
AA seq
DB search
MTDTDLFTADGNTDAPATEAPAAGRSGSLTSLLLPDLRALAAEAGVKGTSGMRKSELIAA
IREHRGEANGAKAGDKTEAKTANATEPKAEAKNETKAAEAVNGNDAVGEAKETQAPAANN
AGEVAADAPAEQPQRRERRGASRRAGSAVEGESGGAGDKPAAKAENADNADAPREERTRD
RNADSSNQGGNKSEGNQGGNRDQGGNRDQGGNRDRGGDNQGGNRNQGGNDNSNNNDDDDS
RQGRRGRRFRDRDRRRRGERGDNQGGNAETELREDDVLQPVAGILDVLDNYAFVRTSGYL
AGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPREGEGGAQSGNNPRQKFNPLVRLDSVNGG
PVENAKNRPDFQKLTPLYPNQRLRLETTPDRLTTRVIDLIMPIGKGQRALIVSPPKAGKT
TIMQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAEL
AIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAAR
NIENGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGT
RKDELLLSTDEFAVVHKLRRVLSGLDPHQAIDLLMSQLRKTKTNYEFLVQVSKTAPGNMD
ND
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcttcaccgccgacggcaacactgatgccccggcaactgaagcg
ccggcggccggacgctccggatcgctgaccagtcttctgctccccgacctgcgtgcgctc
gccgccgaagcaggcgtcaagggcacctccggtatgcgcaagagcgaattgatcgctgcc
atccgcgaacaccgcggcgaggccaacggcgccaaggccggcgacaagaccgaggccaag
accgccaatgccaccgagcccaaggccgaagccaagaacgaaaccaaggccgccgaggcc
gtgaacggcaacgacgctgtcggcgaggccaaggaaacacaggctccggccgcgaacaac
gccggcgaagttgccgctgacgcacccgccgagcaacctcagcgtcgcgagcgccgtggt
gcgtcgcgccgtgccggttcggccgtcgagggtgaatccggcggtgccggcgacaagccc
gccgccaaggccgagaacgcggacaacgccgacgcgccccgcgaggagcgcacccgcgac
cggaacgccgacagcagcaaccagggcggcaacaagtccgaaggtaaccagggcggcaac
cgtgaccagggtggcaaccgtgaccagggcggcaaccgcgaccgcggtggcgacaatcag
ggcggcaaccgcaaccagggcggcaacgacaactcgaacaacaatgacgacgacgacagc
cgtcagggccgtcgcggccgccggttccgtgaccgcgaccgccgtcgtcgcggcgaacgt
ggcgacaaccagggcgggaacgccgagaccgaactgcgcgaggacgacgtcctgcagccg
gtcgccggcatcctggacgtactggacaactacgcgttcgtccgcacttcgggctacctg
gccggaccgaacgacgtctacgtctcgatgaacatggtccgcaagaacggcctgcgtcgt
ggtgacgccgtgaccggtgccgtgcgggtaccgcgcgaaggcgaaggcggcgcgcagagt
ggaaacaacccgcgccagaagttcaacccgctggtccgcctggacagcgtcaacggtggc
ccggtggagaacgcgaagaaccggccggacttccagaagctgacaccgctgtacccgaac
cagcggctgcgcctggagaccactccggaccggctcaccacccgcgtgatcgacctgatc
atgccgatcggaaagggccagcgcgcgctgatcgtgtccccgccgaaggccggtaagacg
acgatcatgcaggacatcgccaacgcgatcaccaggaacaacccggaatgccacctcatg
gtggtgctcgtcgacgagcgtccggaagaggtcaccgacatgcagcgctcggtgaagggt
gaggtcatcgcctcgaccttcgaccggccgccgtcagaccacacccaggccgccgagctg
gccatcgagcgggccaagcgcctggtcgagcagggcaaggacgtcgtggtgctgctggac
tcgatcacccgtctgggccgcgcgtacaacaacgcgtcgcccgcgtcgggccgcatcctg
tccggtggtgtcgactccaccgccctgtacccgccgaagcggttcctcggcgcggcccgc
aacatcgagaacggtggctcgctgaccatcatcgcgaccgcgatggtcgagaccggttcc
accggtgacactgtcatcttcgaggagttcaagggcacgggtaacgccgagctcaagctg
gaccgcaagatcgccgagcgccgggtgttcccggccgtcgacgtcaacccgtccggtacc
cgtaaggacgaactgctgctgtccaccgacgagttcgcggtggtgcacaagttgcgccgc
gtgctcagtggtctggacccgcatcaggccatcgacctgctgatgagccagctgcgtaag
accaagaccaactacgaattcctggtccaggtttccaagaccgcgccgggcaacatggac
aacgactaa
DBGET
integrated database retrieval system
