Microbacterium aurugineum: KV397_04220
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Entry
KV397_04220 CDS
T10179
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maug Microbacterium aurugineum
Brite
KEGG Orthology (KO) [BR:
maug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maug03032
]
KV397_04220 (topA)
03400 DNA repair and recombination proteins [BR:
maug03400
]
KV397_04220 (topA)
Enzymes [BR:
maug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV397_04220 (topA)
DNA replication proteins [BR:
maug03032
]
Prokaryotic type
DNA Topoisomerases
KV397_04220 (topA)
DNA repair and recombination proteins [BR:
maug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV397_04220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
UPL17024
LinkDB
All DBs
Position
864609..867485
Genome browser
AA seq
958 aa
AA seq
DB search
MAEGKKLVIVESPTKMRSIQGYLGDGYEVLSSVGHIRDLADKKDIPAEDKQAYGKYSIDI
DNGFDPYYVVSDRKTKTVAELKRALKSADELLLATDEDREGEAIAWHLLETLKPKVPVKR
MVFHEITKDAIQAAVGNTRELDHDLVDAQETRRILDRLYGWDVSPVLWYKVKTGISAGRV
QSAATRLIVDRERERMAFTSAEYWDVDAAAAATGTSFKIRLVRVDGGQLARGADFDDDGK
LKKAVVVLDEAAASALAEAIDAVGSGSVTKVEAKPGTRSPYAPFTTSTMQQEAGRKLSMG
AKQAMGVAQRLYEKGYITYMRTDSTSLSTQAVQAARSQAVALYGDAAVPLKPRVYKSKSK
NAQEAHEAIRPSGDNFRTPASLSSELDRDEQRLYDLIWKRTVASQMADAKYETTTVTIAV
DAAGKKAEFTASGTVYTFKGFLEAYEEGRDEKRGDADAAENQSLPAVAVGDQLAVSDAEA
KGHRTTPKPRYTEASLVKVLEEKGIGRPSTFASIPETILDRGYAVKRGQALVPTWLAFSV
VRLLEEHFADLVDYDFTAALEDDLDTIARGEQNRVEWLKSFYFGSDSHVGLRQVVDNLGE
IDARALNSTRITDTATLRFGKYGPYLEVADPENPEAKPRIVNVPEELAPDELTAEKAQEL
IDAPVAGDRVLGENPANGKIVVVKDGRFGPYVQENDPVAEDAAIDEATGEVVEAPKPKRG
AKKDAAPKPRTASLFRSMSVDEIDLDTALQLLSLPRVVGVDPESGDEITAQNGRFGPYLK
KGTDSRSLESESQIFSITLEQALEIYAQPKYGAGRRASSALAEFEADPVSGKPIRIRDGR
FGAYVTDGETNVTIPRGQTVEDITFEIAVQMLADKRAKGPAPKRGAAKKAPAKKAPAKKA
AAKATSAKKAPAKKAPAKKAPAKKTTAATSAARSAAAKKAAATRAANAAAKAAEKADS
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaaggcaagaagctcgtcatcgtcgagtccccgacgaagatgcggtctattcag
ggatacctcggcgacggctacgaggtgctcagctccgtcggccacatccgcgacctcgcc
gacaagaaggacattccggcggaggacaagcaggcctacgggaagtactcgatcgacatc
gacaacgggttcgacccgtactacgtcgtgtccgatcgcaagaccaagacggtcgccgag
ctcaagcgcgccctcaagagtgccgacgaactcctgctcgcgacagatgaggaccgcgaa
ggcgaggcgatcgcctggcaccttctggagaccctcaagcccaaggtcccggtcaagcgc
atggtcttccatgagatcaccaaggatgcgatccaggcggccgtcggcaacacccgcgag
ctcgaccacgacctcgtcgatgcccaggagacccgccgcatcctcgaccgtctgtacggc
tgggacgtctccccggtgctctggtacaaggtcaagaccggaatctccgcaggacgcgtc
cagtcggcggcgacccgactcatcgtcgaccgggagcgtgagcgcatggcgttcacctcc
gccgagtactgggacgtcgacgccgcagccgcggcgaccggcacgtccttcaagatccgc
ctcgtccgcgtcgacggcggccagctcgcacgaggcgccgacttcgacgacgacgggaag
ctcaagaaggccgtcgtcgtcctcgatgaagccgcggcttccgctctcgccgaggcgatc
gacgcggtcggctccggctccgtcaccaaggtcgaggccaagccgggaacgcgcagcccc
tacgcgcccttcacgacctcgacgatgcagcaggaggccgggcgcaagctctccatggga
gccaagcaggcgatgggtgtcgcccagcggctgtacgagaaggggtacatcacctatatg
cgtaccgactccacgtcgctgagcacccaggcggtgcaggcggcgcggagccaggcggtg
gccctctacggtgatgccgccgtgccgctgaagccgcgggtctacaagtccaagagcaag
aacgcgcaggaggcgcacgaggccatccgtccctcgggcgacaacttccggacgccggca
tcgctgtcgtccgagctcgatcgcgatgagcagcgcctctacgacctcatctggaagcgc
acggttgccagccagatggccgacgcgaagtacgagaccaccacggtcaccatcgccgtc
gatgccgcggggaagaaggccgagttcacggcgtccggaaccgtctacaccttcaagggc
ttcctcgaggcctacgaggaggggcgggacgagaagcgcggtgacgcggatgccgcagag
aaccagtcgctcccggccgtcgccgtgggcgatcagctcgcggtgtcggacgctgaggcg
aagggccaccgcaccacgccgaagccgcgctacaccgaggcttcgctcgtcaaggtgctc
gaggagaagggcatcggtcgtccctccactttcgcgtcgatccccgagacgatcctcgac
cgcggctacgccgtcaagcgcggccaggccctggtgccgacgtggctggcgttcagcgtg
gtgcgtctgctcgaagagcatttcgcggacctcgtcgactacgacttcacggcagcgctc
gaagacgacctcgacaccatcgcgcgcggtgaacagaaccgtgtcgaatggctcaagtcg
ttctacttcggctcggactcgcacgtcggtctccgtcaggtcgtcgacaacctcggcgag
atcgatgcgcgtgcgctgaactccacgcgcatcaccgacacggccactctccgcttcggc
aagtacggcccgtacctcgaggtcgccgaccccgagaacccggaggcgaagccgcgcatc
gtgaacgtgccggaggagctggcgcccgacgagctgacagcggagaaggcacaggagctc
atcgatgctcctgtcgcgggcgaccgtgtgctcggggagaacccggcgaacggcaagatc
gtcgtcgtcaaggacggccgcttcgggccttatgtgcaggagaacgatccggtggcggaa
gacgccgcgatcgatgaagcgaccggagaggtcgtcgaggccccgaagccgaagcgcgga
gcgaagaaggacgcggcacccaagccgcggacggcatcgctcttccgttcgatgtccgtc
gatgagatcgacctcgacacggcgctgcagctgctcagcctcccgcgcgtggtgggtgtc
gacccggaatccggtgatgagatcacggcgcagaacggccgcttcggtccgtacttgaag
aagggcaccgactcccgctccctcgagagcgagtcgcagatcttcagcatcacgctcgag
caggcgctcgagatctacgcgcagccgaaatacggtgccggtcgacgggcgtcgagcgcg
ctcgccgagttcgaggccgatcccgtcagcggcaagccgatccgcattcgcgacggtcgt
ttcggggcgtacgtcaccgacggagagaccaacgtgaccatcccgcgtggtcagaccgtc
gaagacatcaccttcgagatcgcggtgcagatgctcgccgacaagcgcgccaaggggccg
gcccccaagcggggagcagcgaagaaggctccggcgaagaaggcgccagccaagaaggcg
gcggccaaggcgacctccgcgaagaaggctcccgcgaagaaggccccggcgaagaaggcc
ccggcgaagaagacgacagcggcgacatcggccgcgcggtcggcggcggcgaagaaggcg
gcggccacccgtgcggcgaacgcggccgcgaaggccgccgagaaggcggactcgtga
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