Microbacterium aurugineum: KV397_06320
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Entry
KV397_06320 CDS
T10179
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
maug Microbacterium aurugineum
Pathway
maug03030
DNA replication
maug03430
Mismatch repair
maug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KV397_06320 (dnaE)
03430 Mismatch repair
KV397_06320 (dnaE)
03440 Homologous recombination
KV397_06320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maug03032
]
KV397_06320 (dnaE)
03400 DNA repair and recombination proteins [BR:
maug03400
]
KV397_06320 (dnaE)
Enzymes [BR:
maug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KV397_06320 (dnaE)
DNA replication proteins [BR:
maug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KV397_06320 (dnaE)
DNA repair and recombination proteins [BR:
maug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KV397_06320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPL17394
LinkDB
All DBs
Position
1303732..1307250
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKINAMTQAAAEYGMPAIAVTDHGNTFAAFEFYNAARNA
GIKPIIGLEAYMTPGTHRSDKTRVQWGSPDQKSDDVSGSGAYTHMTMWSQSTAGMHNLFR
ISSRSSMEGYYFKPRMDRELLQTYGKGIIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLAKDLNIPLVATNDSHYTHQHEADAHEALLCV
QSGSTMDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFDTSANYMP
RFPVPDGETEDSWLIKEVEAGLHYRYPGGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIEYVTEKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPPV
MGKDMPLDGMFDSAHPRYKEASEFRTLIETDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSDPLLDIIPIMRREQDGQIVTQFDYPSCESLGLIKMDFLGLRNLTIISDALDNIRTNRG
EELDLEHLGLDDPGVYQLLARGDTLGVFQLDSPPLRSLMRLMKPDNFGDISALIALYRPG
PMGANSHTNYALRKNGVQEITPIHPELEAPLAEILEESYGLIIYQEQVMAIAQAVAGFSL
GQADILRRAMGKKKKSELDKQYEGFAGGMKERGFGEDAIKALWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVSDSINF
FAAVGDDIRFGLGAVRNVGSNVVEGIVQARKGERFTSFHHFLDTVPLHVSNKRTVESLIK
AGAFDSMGDTRRALMEVHEDAVEAAVDRKRNEAQGAIGFDFDSLYDGMEEAAPAKVPARP
EWVKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASISIHDLNNSEDLQDGDQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYTEFQHTLQQDAILAVRGRVSRRDD
GLNLHAQSAFAPDIGSFDAAGPLSLVLAEQRATERVMGELAEVLRRHNGDTEVLLRVHRG
GTAKVFEVPMPVKVSADLFGDLKSLLGPTCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgactccttcgtccacctgcacgtgcacagcgagtactccatgctggacggt
gcggcgaagatcaatgcgatgacccaggcagccgccgaatacgggatgccggctatcgcg
gtgaccgatcacggcaacactttcgcggcattcgagttctacaacgcggcgcggaacgcg
ggtatcaagcccatcatcgggctcgaggcatacatgaccccgggcacgcaccgcagcgac
aagacgcgcgtgcagtggggctcacccgaccagaagagcgacgacgtctccggttcgggc
gcgtacacccacatgacgatgtggagccagagcaccgcgggcatgcacaacctcttccgg
atcagctcccggtcgagcatggagggttactacttcaagccccgcatggaccgcgagctg
ctccagacctacggcaagggcatcatcgcgactacaggatgcccctccggcgaggtccag
acgcgactgcggctggggcagtacgacgcggcgcgcgcggcggctgcagagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggaccacggtctctccatcgagcga
cgggtgatgaccgacctgctccgcctcgcgaaagacctcaacatcccgctcgtcgcgacc
aacgactcgcactacacgcaccagcacgaggccgacgctcacgaggctctgctgtgcgtg
cagtcgggttccaccatggacgatccgaaccgattcaagttcgacggcgacggctactac
atcaagaccgccgccgagatgcggcagctgttccgcgatcaccccgaggcctgcgacaac
acgctcctgatcgccgagcgctgcgaggtcgagttcgacacctcggcgaactacatgccg
cgcttcccggtccccgacggtgagaccgaggacagctggctcatcaaggaggtcgaggcg
ggcctgcactaccggtaccccggtggcatccccgacaaggtgcgcaagcaggccgagtac
gagaccggcatcatcctgcagatgggcttccccggctacttcctcgtcgtcgcggacttc
atcaactgggccaaggacaacggcatccgtgtcggtcccggccgtggttcgggtgccggg
tcgatggtcgcctacgcgatgcggatcaccgatctcgacccgctcgagcacggtctgatc
ttcgagcgcttcctcaaccccgaccgtgtctcgatgcccgacttcgacgtcgacttcgat
gatcgtcgccgcggcgaggtcatcgaatacgtcaccgagaagtacggatccgagcgcgtc
gcccagatcgtcacatacggcacgatcaagtcgaagcaggcgctgaaggacgccgggcgc
gttctcggcttccccttcagcatgggggagcgcctcacgaaggcgatgccgccgcccgtg
atgggcaaggacatgcccctggacggcatgttcgactcggcgcacccccggtacaaggaa
gcgagcgagttccgcacgctgatcgagaccgacccggaggccaagaccgtcttcgaccgt
gctctcggtctcgaagggctgaagcgtcagtggggcgtccacgccgccggcgtgatcatg
tcgtccgatccgctgctcgacatcatcccgatcatgaggcgcgagcaggacggccagatc
gtcacgcagttcgactacccgtcgtgtgagtcgctcgggctgatcaagatggacttcctc
gggctgcgcaacctcacgatcatctccgatgcgctcgacaacatccggacgaaccggggc
gaagaactcgacctcgagcacctcggtctcgacgacccgggtgtgtatcagctgctcgcg
cgcggagacaccctgggcgtcttccaactcgacagtccgccgctgcgctcgctgatgcgc
ctgatgaagccggacaacttcggtgacatctcggccctcatcgccctgtatcgcccgggc
ccgatgggcgcgaactcgcacaccaactacgcactgcgcaagaacggggtgcaggagatc
acccccatccatcccgagctcgaagcgccgctcgcggagatcctggaggagtcgtacggg
ctcatcatctaccaggagcaggtcatggccatcgctcaggccgtcgccggcttcagcctc
ggacaagcagacatcctccgtcgcgcgatgggcaagaagaagaagtcggagctcgacaag
cagtacgagggcttcgccggcgggatgaaggagcgcggcttcggcgaggacgcgatcaag
gcgctgtgggacatcctgctgcccttctcggactacgccttcaacaaggcccactccgcg
gcgtacggactcgtgtcgtactggaccgcatacctcaaggcgcactatcccgccgagtac
atggcggcgttgctcaccagcgtgggcgactccaaggacaagatggccctgtacctgaac
gagtgccgtcgcatggggatcaaagtccttccgcccgacgtctcggactcgatcaacttc
ttcgcggccgtcggagacgacatccgcttcggcctcggcgctgtgcgcaacgtcggcagc
aacgtcgtcgaagggatcgtgcaggcgcgcaagggggagcggttcacctcgttccaccac
ttcctcgacaccgtgccgctgcatgtctcgaacaagcgcaccgtggagtccctgatcaag
gccggcgccttcgactcgatgggcgacacccgccgagcgctcatggaagtgcacgaagac
gcggtcgaggcagccgtcgaccgcaagcgcaacgaggcacagggcgcgatcgggttcgac
ttcgacagtctctacgacggcatggaagaggccgctccggccaaggtgccggcccgcccc
gagtgggtcaagaaggacaagctcgccttcgagcgggagatgctcggcctgtacgtctcc
gatcacccgctggccgggctcgaggtgccgctcgcgaagcatgcgtcgatctcgatccat
gacctcaacaactccgaagacctgcaggacggcgatcaggtgactgtggcgggcctcgtg
accagtgtgcagcaccgcgtggccaaggcgagcggtaatccgtacggcatgatcacggtc
gaggacttcaacggcgaggtcaccgtgatgttcatgggcaagacgtacaccgagttccag
cacaccctgcaacaggacgcgatcctcgccgtgcgcgggcgcgtgtcccgtcgtgatgac
ggcctcaacctgcacgcgcagtccgcgttcgcgcccgacatcggctcgttcgatgccgca
gggccactgtcgttggtcttggcggagcaacgtgccaccgagcgggtgatgggtgagctc
gccgaggtcctgcgtcggcacaacggcgacacggaggtgctgctccgcgtgcaccgcggc
ggcactgcgaaggtcttcgaggtgcccatgccggtgaaggtctcggcagacctcttcggt
gacctcaagtcccttctcggacccacctgtctggggtga
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