Microbacterium aurugineum: KV397_09020
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Entry
KV397_09020 CDS
T10179
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maug Microbacterium aurugineum
Brite
KEGG Orthology (KO) [BR:
maug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maug03032
]
KV397_09020
03400 DNA repair and recombination proteins [BR:
maug03400
]
KV397_09020
Enzymes [BR:
maug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV397_09020
DNA replication proteins [BR:
maug03032
]
Prokaryotic type
DNA Topoisomerases
KV397_09020
DNA repair and recombination proteins [BR:
maug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV397_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Cas3_I-F_Cas2
Motif
Other DBs
NCBI-ProteinID:
UPL17883
LinkDB
All DBs
Position
complement(1853389..1854387)
Genome browser
AA seq
332 aa
AA seq
DB search
MARLNRVVPGEDPGFRRRRSGSGFRYAGPGGETAPEADRQRIDDLVIPPAWRDVWIAADP
LAHIQAVGVDEAGRKQYLYHPLWRVSRDRKKFVRALELAAALPGARARVTRALREDGQTK
ERALAIAFRLLDDAALRIGSERYLVRHGSRGLTTLRRRDVRVAGSEVALSFPAKSGRTAS
IEITDEALADALTDFAAGKSGAFLLAYRRGRRRVRISPAEVNAYLREVTGSSFSAKDFRT
LHGTIIAADALARIGELDRRSERKQAERLAVQAAATALGNTTAVARGSYIDPRVFTQYAR
GRTLDISVSPETAIRRLLGGPATSRKRTRRSG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgagactgaaccgggtggttccgggggaggaccccgggttccgcaggcggcgatcc
ggatcggggttccggtatgcgggtcccgggggagagaccgccccggaagctgatcggcaa
cgcatcgacgatctggtgattccgccggcctggcgcgacgtctggatcgctgcggatccg
ttggcgcacatccaagcggtcggggtcgacgaggcgggccgcaaacagtacctctaccac
ccgctgtggcgcgtcagccgcgaccgcaagaagttcgtccgcgctctcgaactcgccgct
gcgcttcccggtgccagagcacgcgtgacacgggctctccgcgaggatggacagacgaag
gagcgcgcgctggcgatcgccttccgcctgctcgacgatgcggcactccggatcggctcg
gagcggtacctggtgcgtcacggcagccgtggtctcacgaccctgcgacgtcgtgacgtg
cgcgtggccgggagcgaggtggcgttgtcgttccccgccaagagcgggcgcacggcatcg
atagagatcaccgatgaggcgctcgcggacgccctgaccgatttcgccgcggggaagtcc
ggagccttcctgctggcctatcggcgcggccgccgccgtgtgcgcatcagcccggccgaa
gtgaacgcgtatctgcgcgaggtcaccggctcctccttctcggcgaaggacttccggact
ctgcacgggacgatcatcgccgccgacgccctggcccggatcggcgaactcgatcgtcgc
agcgagcgcaagcaggccgagcggctcgcagtgcaggccgcggcgaccgcactcggcaac
accaccgccgtcgcacgcggcagctacatcgatccgagagtgttcacgcagtatgcgcgg
gggcgcaccctcgacatctccgtgtcgcccgagacggccatccgccgactgctgggcgga
ccggcgacgtcgcggaagaggacgcggcgatccggatga
DBGET
integrated database retrieval system
