Microbacterium aurum: BOH66_09275
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Entry
BOH66_09275 CDS
T04977
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
maur
Microbacterium aurum
Pathway
maur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOH66_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maur03019
]
BOH66_09275
03009 Ribosome biogenesis [BR:
maur03009
]
BOH66_09275
Enzymes [BR:
maur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BOH66_09275
Messenger RNA biogenesis [BR:
maur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOH66_09275
Ribosome biogenesis [BR:
maur03009
]
Prokaryotic type
rRNA processing factors
BOH66_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
AC_N
KIAA1549
LPP
Motif
Other DBs
NCBI-ProteinID:
APZ35844
UniProt:
A0A1P8UCJ0
LinkDB
All DBs
Position
1875921..1878341
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AA seq
806 aa
AA seq
DB search
MDDVQIEISADIAETDAVADAAADPSRLDTAEVLAVVEVTDADTAASEVPAAVKPDADAP
AADDTAAETPAAEDTAAEAAAPEAPAPESPVAETAETGAQAPAAPEPTTPEPPTAVSLGL
LPAEFVSSVSTQLVFYAPEIVPLPARPGSAREDRDDQDDASGQGSQGGSSARRRNRRRGG
GSPASDADDTTGGQSAPRRRAVELITEPQRIKGSTRLEAKKQRRRDGREAGRRRTVVTEA
EFLARREAVDRDMIVRSKNGRIQIAVLEDNVLVEHYVARSQESSLIGNVYLGRVQNVLPS
MEAAFVDIGRGRNAVLYSGEVDWDAVETGNQPRRIELALKSGDRVLVQVTKDPVGHKGAR
LTSQISLPGRYLVYVPGGAMNGISRKLPDTERARLKRILKEVLPESSGVIVRTAAEGATE
DQLTRDVQRLTSQWEHISSQVESIPAPALLHSEPDLLVKIVRDVFNEDFSKMLIQGEEAY
QTITSYLTGVAPDLLERIEKYEDDQDPFDRFRVTEQIEKALDRKVWLPSGGSLVIDRTEA
MTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRD
LVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLETFSEPCEVCAGRGVIVHHD
PVVKHRGPQQQSSGGRRTRQNGPSAPAGAGGGTHVITESAKSALAQIAASTIHSHEEPTA
DVTLPLGDLAVAPAAEPTAERPKKPRKKRGEGGKPAERTEKDLLLDSVLNALPEPKAPGQ
GRGRRRVTTAALSGTPVAATPEGADS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atcgacgacgtgcagatcgagatctccgccgacatcgcagagaccgacgccgtcgcggat
gccgccgcagacccgtcccgcctcgacaccgccgaggtgctcgccgtggtcgaggtgacg
gatgccgacaccgccgcctccgaggtgcccgcggccgtgaagcccgacgcggatgcgccc
gccgccgacgacacggcggccgagacgcccgccgccgaggacacggcggccgaggcggcc
gcccccgaggcgcccgcccccgagtcacccgtggccgagacggccgagaccggggcacag
gcgcccgcagcccccgagccgaccacgcccgagccgcccaccgccgtgagcctcgggctc
ctgccggcggagttcgtctccagcgtgtccacgcagctggtgttctacgcgcccgagatc
gtgccgctgccggcgcgcccggggtcggcgcgtgaggaccgcgacgaccaggacgacgcg
tccggtcagggctcgcagggcggttcgagcgcccggcggcgcaaccgtcgccgcggcggc
gggtcaccggcatccgacgccgacgacacgacgggcggtcagagcgcaccgcgccgccgc
gccgtcgagctcatcaccgagccgcagcgcatcaagggctccacgcgcctggaggccaag
aagcagcgccgccgcgacggccgtgaggccggacgccggcgcaccgtcgtcaccgaggcc
gagttcctcgcccgtcgcgaggccgtcgaccgcgacatgatcgtccgctccaagaacggc
cgcatccagatcgcggtgctcgaggacaacgtcctcgtcgagcactacgtcgcccgcagc
caggagtcctcgctcatcggcaacgtctacctcggtcgcgtgcagaacgtgctgccgtcg
atggaggcggcgttcgtcgacatcggccggggccgcaacgccgtgctgtactcgggcgaa
gtggactgggatgccgtcgagaccggcaaccagccgcggcgcatcgagctcgcactcaag
agcggcgaccgcgtgctcgtgcaggtgacgaaggaccccgtcggccacaagggcgcgcgc
ctcacgagccagatctcgctccccggccgctaccttgtgtacgtgcccggcggcgccatg
aacggcatctcccgcaagctccccgacaccgagcgcgcgcgcctgaagcgcatcctcaag
gaggtgctcccggagtccagtggcgtcatcgtgcgcaccgcggccgagggcgcgaccgaa
gaccagctgacccgtgacgtgcagcgcctgacgtcgcagtgggagcacatctccagccaa
gtcgagtcgatcccggcccccgcgctgctgcactccgagcccgacctgctcgtcaagatc
gtccgcgacgtcttcaacgaggacttctcgaagatgctcatccagggcgaagaggcgtac
cagaccatcacgtcgtacctgaccggcgtcgcccccgacctgctcgagcgcatcgagaag
tacgaggacgatcaggatccattcgaccgtttccgcgtcaccgagcagatcgagaaggcg
ctggaccgcaaggtctggctgccctcgggcggttcgctcgtcatcgaccgcaccgaggcg
atgacggtcgtcgacgtcaacaccggcaagttcgtcggctccggcggcaacctcgaggag
accgtcaccaagaacaacctcgaggcggccgaggagatcgtccgccagctgcgactgcgc
gacatcggcggcatcatcgtcgtcgacttcatcgacatggtgctggagtccaaccgcgac
ctcgtgctgcgacgtctcgtcgagtgcctgagccgtgaccggacgaagcaccaggtcgcc
gaggtcacctcgctcggcctcgtccagatgacgcgcaagaagctcggcctggggctcctg
gagaccttcagcgagccgtgcgaggtgtgcgccggtcgcggcgtcatcgtgcaccacgac
ccggtggtcaagcaccgcggcccgcagcagcagtcctccggcgggcgtcgcacccggcag
aacggaccctccgccccggccggtgcgggcggcggcacgcacgtgatcaccgagagcgcc
aagtccgcgctcgcgcagatcgcggcgtcgaccatccactcccacgaggagcccaccgct
gacgtcacgctgccgctcggcgacctcgcggtcgctcccgcggcggagccgaccgcggag
cgccccaagaagccccgcaagaagcgcggtgagggcggcaagcccgccgagcgcaccgag
aaggacctcctgctcgattccgtgctcaacgcgctgcccgagccgaaggcgcccgggcag
gggaggggccggcgacgcgtcacgacggccgcgctcagcggaacgccggtcgccgcgacg
ccggagggcgcggactcctag
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