Microbacterium aurum: BOH66_14385
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Entry
BOH66_14385 CDS
T04977
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maur
Microbacterium aurum
Pathway
maur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BOH66_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maur03021
]
BOH66_14385
03400 DNA repair and recombination proteins [BR:
maur03400
]
BOH66_14385
Enzymes [BR:
maur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BOH66_14385
Transcription machinery [BR:
maur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BOH66_14385
DNA repair and recombination proteins [BR:
maur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BOH66_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ADIP
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
APZ35308
UniProt:
A0A1P8UB09
LinkDB
All DBs
Position
complement(2974766..2978641)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLESTTFDQLRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEEARHRDLPTHEANLRLEIKNLADRRDARVATRLAKLEEE
LAALEAEGAKADQRKKVKDAAEKEMAAIRKNADDQVAKLERMWDEFRNLAVGQLKQEDDV
FQELQDRFGQYFEAYMGAESIQRRLQTFDLAAEAESLHLQIAEGKGQRKIRAIKRLKVVN
SFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKAMALELFKPFVIKRLIDLGHSQNIKAAKRSVERAR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAAGEGR
VFGSVGEAILAKDEGTLDLQAKVRIRIPGLTFLEGEAPEGYERHGLVDASLGQAIFNDTL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDVL
TPPNKAEIIAKYEKRAQKVQSQFENGLVTDAERRQEQIKIWTEATDEVQAAMKANFPADN
TINRMVSSGARGNWLQIRNIAGIRGLVNNTKGEIMPRPIISSYREGLSVAEYFTATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLEFTIAAPGADGALVRDANVE
NSVFARTLAADVVSPSGEVVAEAGDDVGDVLIDKLVDAGVETIKVRSVLTCDSAVGVCAK
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPHVYPVLKRATLLVEDGQHVTV
GQPILVGTLDPKEVMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGETSLLPGELVDFKRYQQINREVVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVVVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFSTDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgagtccaccactttcgatcagcttcgcatcggtctcgccaccgctgacgacatc
cgtcgttggtcctacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggtctgttcggcgagcagatcttcggcccttcccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcacgaagtcctcggtccgtcgtgagcgcatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtgatctcggtcgac
gaggaggcgcgtcaccgcgacctgccgacccacgaggcgaacctccgcctggagatcaag
aacctcgccgaccgtcgtgacgcccgcgtcgcgacgcgcctggccaagctggaggaggag
ctcgccgccctggaggcggagggtgccaaggccgaccagcgcaagaaggtcaaggatgcc
gccgagaaggagatggcggcgatccgcaagaacgcggacgaccaggtcgccaagctcgag
cgcatgtgggacgagttccgcaacctcgccgtcggccagctcaagcaggaggacgacgtc
ttccaggagctgcaggaccggttcggtcagtacttcgaggcctacatgggcgccgagtcc
atccagcgccgcctgcagacgttcgacctggccgccgaggccgagtcgctgcacctgcag
atcgccgagggcaagggccagcgcaagatccgcgcgatcaagcgcctgaaggtcgtcaac
tccttcctgcagacgggcatgtccccggcatccatggtcctcgacgtcgtcccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgcttcgccaccagcgacctg
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctccgtcgcctgatcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcc
ctgttcgacaacggccgccgcggtcgtcccgtcaccggcaccggcaaccgtgcgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctccaccag
tgcggtctgccaaaggcgatggcgctcgagctgttcaagccgttcgtcatcaagcgcctc
atcgacctcggtcactcgcagaacatcaaggccgccaagcgctcggtcgagcgcgcgcgt
cccgaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctcaaccgc
gctcccacgctgcaccgcctgggcatccaggccttcgagccgcaactcgtggagggcaag
gccatccagctgcacccgctcgtctgcgcggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtccgtcgaggcgcaggccgaggcgcgcatcctcatgctc
gcgtcgaacaacatcctgaagccctccgacggccgcccggtcaccctgccctcgcaggac
atgatcatcggtctgcaccacctgaccacggtcaaggagggtgccgcgggcgagggtcgc
gtgttcggctcggtcggcgaggcgatcctggcgaaggacgagggcaccctcgacctgcag
gccaaggtccgcatccgcatcccggggctcacgttcctcgagggcgaagcgcccgagggc
tacgagcgtcacggtctcgtggacgcgtcgctcggtcaggcgatcttcaacgacaccctg
cccaagggctacccgttcgtgcgcgagcaggccgacaagggcaagctctcgcagatcgtc
aacaagctcgccgaggagtaccccaaggtggaggtcgcggcatcccttgaccgcatcaag
gacgccggcttctactgggccacccgctcgggtgtgaccgtcgcgctcagcgacgtgctc
accccgccgaacaaggccgagatcatcgccaagtacgagaagcgggcgcagaaggtgcag
agccagttcgagaacggtctcgtgaccgacgccgagcgtcgtcaggagcagatcaagatc
tggaccgaggcgaccgacgaggtgcaggccgcgatgaaggccaacttcccggctgacaac
accatcaaccgcatggtgagctcgggcgcccgtggtaactggctgcagatccgtaacatc
gccggcatccgaggcctcgtcaacaacaccaagggcgagatcatgccccgtccgatcatc
tcctcgtaccgcgagggtctgagcgtggcggagtacttcacggcgacccacggtgcccgt
aagggtctggccgacacggccctccgtaccgccgactcggggtacctgacgcgtcgactc
gtcgacgtgtcgcaggacgtcatcatccgtgaggacgactgcggcacgacgaagggcctc
gagttcacgatcgccgctccgggtgccgacggcgccctggtgcgcgacgcgaacgtcgag
aactcggtgttcgcgcgcaccctcgccgccgacgtcgtctcgccctcgggcgaggtcgtc
gccgaggcgggcgacgacgtgggcgacgtgctcatcgacaagctggtggatgcgggggtc
gagaccatcaaggtccgctccgtcctcacctgcgactcggcggtcggcgtctgcgcgaag
tgctacggccgttccctcgcgaccggcaagctcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggcacgcagctgacgatgcgcaccttccacacc
ggtggttccgcgtcggccgacgacatcacgcagggtctgccccgcgtgcaggagctcttc
gaggcccgcaccccgaagggtgcgtcgccgatcgccgaggccgacggccgcatcacgatc
gacgagaccgacaaggccaagaaggtcatcctgacgcccgacaacggcgacgagccgcac
gtctacccggtcctcaagcgcgcgacgctgctggtcgaggacgggcagcacgtcacggtc
ggccagccgatcctcgtcggaacgctcgaccccaaggaggtcatgcgcgtgcagggtgcc
cgcgaggtgcagaagtacctcgtcggcggcgtgcagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcggaaggtcaccgtc
gtcgaccacggcgagacgtcgctgctgcccggtgagctggtggacttcaagcgctaccag
cagatcaaccgcgaggtcgtggccgagggcaagcgccccgcgtcgggccgcccggagctg
atgggtatcacgaaggcgtcgctcgcgacggagtcgtggctgtcggccgcgtcgttccag
gagaccacccgcgtcctcacgcaggcggccatggagggcaagagcgacccgctcgtcggc
ctcaaggagaacgtcatcatcggaaagctcatccccgccggcaccggccttgcgaagtac
cgcaacgtcgtggtcgaggcgacggaggaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcgtacagcgacgccgacctgagctacgtcgacttcgacagcttc
tcgacggacgacttcacgcccggcacctataactga
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