Microbacterium aurum: BOH66_15495
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Entry
BOH66_15495 CDS
T04977
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maur
Microbacterium aurum
Pathway
maur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOH66_15495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maur03019
]
BOH66_15495
03400 DNA repair and recombination proteins [BR:
maur03400
]
BOH66_15495
Enzymes [BR:
maur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BOH66_15495
Messenger RNA biogenesis [BR:
maur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BOH66_15495
DNA repair and recombination proteins [BR:
maur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOH66_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
APZ35950
UniProt:
A0A1P8UD01
LinkDB
All DBs
Position
complement(3223619..3225685)
Genome browser
AA seq
688 aa
AA seq
DB search
MFDDPYGDVPWDVDELTPPDEFDAPPPPDPAFDGYGGALARATRSASPDAPAPPHRPAAP
SPASAAPTRDTASAPVTPRTEHTGKDPRAVLKEVFGYDDFRGDQADIVARVIAGGDAVVL
MPTGGGKSITYQVPALVRPGTGLVISPLIALMHDQVDALIANGVRAAYLNSTQSPTERAG
VEQAFLAGELDLLYVAPERLSGAATTQLLQRGRLSVIAIDEAHCVSQWGHDFRPDYLALG
DLAERFPDVPRMALTATATRATHQELTERLRLPAARHFVASFDRPNIQYRIVPKVDPRRQ
LLDFVRAQPAASAGIVYALSRKSVEQTAEYLRTQGVDALPYHAGLDAAIRARNQGRFLRE
DGVVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGEPAVAWMAYGLGDV
VQQRRLIDQSPGDRAYKMRLGQHLDAMLALCETVSCRRQNLLNYFGQESGPCGNCDTCLD
TPDTWDGLVPAQKLLSTIVRLQRERGQAFGAGHLIDILRGASTDRIRQQGHDKVATYGLG
ADLSDQDWRSVIRQLLARGVIVAQGEYGVLAVGEEGAAVLRGEAAVPLRRDVLGRGGATR
AKASRRAQGATDAVADADRDLFEALRAWRAGVAKEQGVPAYIVFGDATLRALAERRPASV
TDLEGITGIGAKKRDAYGDAVLQVVAAH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgacccgtacggcgacgtcccgtgggatgtcgacgagctgactccgcccgac
gagttcgacgcacccccgccgccggatcccgccttcgacgggtacggtggggcgctcgca
cgcgcgactcgcagcgcctcaccggacgcgccggctccgccacatcgcccggccgctccc
tccccggcatccgccgccccgacgcgcgacaccgcgagcgcacccgtgaccccgcgcacc
gagcacaccggcaaagacccgcgggccgtgctcaaggaggtcttcggatacgacgacttc
cgcggcgaccaggcggacatcgtcgcccgcgtcatcgccggcggcgacgccgtcgtgctc
atgcccacgggcggcggcaagtccatcacctaccaggtgcccgcgctcgtccgacctggc
accggcctcgtcatcagcccgctcatcgccctcatgcatgatcaggtcgacgccctcatc
gccaacggcgtgcgcgcggcctacctcaactccacccagagcccgaccgagcgcgcgggc
gtcgagcaggccttcctcgcgggcgagctcgacctgctctacgtcgcccccgaacgcctg
agcggcgcagcgaccacgcagctgctgcagcgcgggcggctgagcgtcatcgcgatcgac
gaagcccactgcgtcagccagtggggccacgacttccggcccgactacctggcgctcggc
gacctcgccgagcgcttccccgacgtcccgcgcatggcactcaccgcgaccgccacccgc
gccacccatcaggagctcaccgagcggctgcgcctgcccgccgcccgccacttcgtcgcg
agcttcgaccgccccaacatccagtaccgcatcgtgcccaaggtcgaccctcgtcgccag
ctgctcgacttcgtgcgcgcgcagccggccgccagtgcgggcatcgtctacgcgctcagc
cgcaaatcggtcgagcagaccgccgaatacctccgcacgcaaggcgtcgacgcgctgccg
taccacgcgggattggatgccgccatccgcgcacgcaatcagggtcggttcctgcgcgaa
gacggcgtcgtcatggtcgccacgatcgcgttcggcatgggcatcgacaagcccgacgtc
cgcttcgtcgcgcacatcgacctgccgaagtccgtcgagggctactaccaggagaccggc
cgcgccggccgcgacggcgagcccgcggtggcgtggatggcctacggcctcggcgacgtc
gtgcagcagcgccgcctcatcgaccagtcacccggcgaccgcgcctacaagatgcggctg
ggccagcacctcgacgcgatgctcgcgctctgcgagaccgtgtcgtgccgccggcagaac
ctgctgaactacttcggccaggaatccggcccctgcggcaactgcgacacctgcctcgac
acccccgacacgtgggacggcctcgttcccgcgcagaagctgctgtcgacgatcgtgcgc
ctgcagcgcgagcgcggacaggcgttcggcgcagggcacctcatcgacatcctccgcggc
gcgtcgaccgaccgcatccgccaacagggacacgacaaggtcgccacctacgggctcggc
gccgacctcagcgaccaggactggcgcagcgtcatccgccagctgctcgcccgcggcgtc
atcgtcgcgcagggcgaatacggcgtgctcgccgtcggcgaggagggcgcggccgtgctc
cgcggcgaggccgccgtgcccctccggcgcgacgtcctcggccgaggcggcgcgacacgt
gcgaaggcctcgcggcgcgctcagggagcgacggatgccgtggccgacgccgaccgcgac
ctgttcgaggcgctgcgggcgtggcgtgccggcgtcgccaaggagcagggggttcccgcc
tacatcgtgttcggcgacgcgacgctgcgcgcgctggccgagcgacgcccggcatccgtc
accgacctcgagggcatcaccgggatcggcgcgaagaagcgcgacgcctacggcgacgcc
gtgctgcaggtcgtcgccgcgcactga
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