Mycolicibacterium austroafricanum: JN090_04310
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Entry
JN090_04310 CDS
T10323
Name
(GenBank) DEAD/DEAH box helicase
Organism
maus Mycolicibacterium austroafricanum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
YjiV_N
SNF2-rel_dom
DUF559
DUF7856
RUBY_RBDX
TRAPPC9-Trs120
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QRZ07781
LinkDB
All DBs
Position
complement(886218..891353)
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AA seq
1711 aa
AA seq
DB search
MDAFGVLNEVLDDYENFVKGFLEIKDDQIRSKVEKEIADGLLWPEPWLALNPAFESGGTV
SELAGKGVLDPEAPTIFRDPTGNQIAFHRHQTDAFEIANRRESYVLTTGTGSGKSMSYIV
PIVDRVLREGSGKGVRAIIVYPMNALANSQRNELEKFLGKTNPKVSFARYTGQENKEERE
KTLASPPDILLTNYVMLELMLTRPKERKNLISSAANLSFLVLDELHTYRGRQGADVAMLV
RRLRGAVTSNDIQCIGTSATLAGPGTKAEQRQQVAELATRIFGIEIPATNIVGETLRRAT
TDTTDSAALTARLAKPTPTDWQALQCDPLAIWTEQHFGLHTDDEGKLARRPPSKLKDAAQ
KLHDETGIDGPTCEQKLQELLLAGSKARDPQGRALFAFKLHQFIGKGDTVYTTLEPAEKR
YLTTQYQRSAPNRPLGQPLFPLAFCRECGQEFLVVNLERGGESFSPRIPNSDLVEHPDAE
GLLFLTKEPWPDPSDPALLDLVPEDWIVSSGSGQVLDKARVPKLPNSLRADEFGTITDDG
MPVAFFERLEFCPSCKTSYESTRQSQFSRVASLGTEGRASAVTVLSQSVVRTLRTEEDLD
DEARKFLAFSDNRQDASLQAGHFNDFVLVGMIRSALYRAAADHQEREGEPLTDENLGPEV
VKALSGQGLKFFARDEETADEPIPRKKIPRALRDVVTYRLWADLKRGWRITMPNLEQTGQ
LRLAYEGVDELAANNDKWASCGEPLAGADPETRRDVMHVVLDELRRNLCIDTEFLTDEKF
DAVRRASREWLKDPWAISDEAGTYSGLAYPGGRPKNVAGIGADLYLSGLGAFGRWLRRPN
RFPAFQHALKTADAQVIIEHLMEVMAKAGILVRTAVPKRPTGYQLRADLIAWHPGDGKHR
APDPIRSNQTEGRVNPYFKGLYAETAKSLVGLEAREHTAQVEPSKRQRREEEFGEARLPV
LYCSPTMELGVDIKSLNVVGMRNVPPTPANYAQRSGRAGRSGQPAIALTYCATGNAHDAY
YFRRSQDMVAGAVAPPRLELGNQDLVRAHAHSIWLVKCGLDLKASMVDLLEIDQPGQPLR
AEVLATIESKSSRAEAITAITAVLEAASEVTSAPWWTDTWVTDTVDKAPARFNNAADRWR
GLYNEAQNELDQANQTLKTIGASEASKQRARGRISEARAALDLLKGQVDDVLQGDFYTYR
YFASEGFLPGYSFPRLPLSAFIPAERRTRSGGEGDFIQRPRFVAISEFGPGAFIYHEGAR
YEVNRVSLPAREDGTGVHISEIKRCGACGYLHETTEPDLCQHCGSPFGIEATMGNLMRLL
SVKTRRRDRISADEEERQRAGHEIVTTIRFVPHGVRAGQLTSTITEGGHELGTMTYGDTA
LIRRMNVGLRRRKDKDVRGYVLDTVEGRWCKEADLAKNVHGEAPRYQRVIPYVEDHRNAL
LLHLDPSIGTDQRMAAMYALKRGIEAVYQLEGSELAVEALPSNTGDDAWSRLLFFEAAEG
GAGVLRRLAAEDGQLTRVARKALEILHFDPDTGEDRKRAPHATEDCAQACYDCLLSYSNQ
WDHQHLDRHCVRDLLKRLAVSSIAVGAGGEAPDTQLERLEQACDSELEKKFLAMLVQHGY
RLPDDAQQIVTGLYVRPDFAYHVDGMDVAIFVDGPHHDAAHQQEKDEQARMKLEDEAGWL
VLRFHHRDAEAGWLNTIAEHSGVFGEARANA
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttcggtgtcctcaacgaggtcctggacgactacgagaacttcgtcaagggc
ttcttggagatcaaggacgaccagattcgcagcaaggtcgaaaaggagatcgccgacggt
ctgctctggccggagccgtggctcgcactgaatccggcgttcgagtccggcggcaccgtc
agtgaactggccggcaagggtgtcctcgaccccgaggcgcccaccatcttccgcgacccg
accggcaaccagatcgccttccaccggcaccagacggacgccttcgagatcgccaaccgc
cgcgagtcctatgtgctgaccaccggcaccggctcgggcaagtcgatgtcctacatcgtg
ccgattgtcgatcgcgtgctgcgcgagggctccggcaagggcgtgcgggcgatcatcgtg
tatccgatgaacgccctggccaacagccagcgcaacgagttggagaagttcctcggcaag
acgaaccccaaggtcagcttcgcccgatataccggccaggagaacaaggaggagcgtgag
aagacccttgcctctcccccggacatcctgctgaccaactacgtcatgttggaactgatg
ctgacccgcccgaaggagcgcaagaacctcatcagcagcgcggcgaacctgtcattcctg
gttctcgacgagctgcacacctaccgcggccggcagggcgcagatgtggcgatgctggtg
cgccggctgcgcggcgcggtcacatcgaacgacatccagtgcatcgggaccagcgcgacc
ctggccggcccgggcaccaaggccgagcagcgccagcaggtcgccgaactggcgacccgg
atcttcggcatcgagatccccgccaccaacattgtcggggagaccctccgccgcgcgacg
accgacaccaccgattccgccgcgcttacagcccgcctggcaaagccgacaccgacggac
tggcaggcactgcagtgtgacccgctggccatctggaccgaacagcatttcggcctgcac
accgatgacgagggcaagctggcacgacgcccgccgtccaagctcaaagacgccgcccag
aagctgcacgatgagaccggcattgacggaccgacctgcgagcagaagttgcaggagttg
ctacttgcaggttcaaaagcgcgcgatccgcagggccgcgccttgttcgccttcaaactg
catcagttcatcggcaaaggcgacaccgtctacaccaccctggaacccgccgagaagcga
tacctcaccacgcagtatcagcgcagcgcacccaaccgccccctcggtcagcccctgttc
ccgctggcgttctgccgtgagtgcggtcaggagttcctggtcgtgaacctggagcgcggc
ggcgagagcttcagcccccgtatccccaactccgatctggtcgagcaccccgacgctgaa
ggcctgttgttcctgaccaaggagccatggccggacccgagcgatccggccctgctcgac
ctggtaccggaggattggatcgtctccagcggatcgggccaggtactggacaaagcccgg
gttcccaagttgcccaactcattacgtgccgacgagttcggcaccatcaccgacgacgga
atgccggtggcgttcttcgaacgcctcgaattctgcccatcctgcaagaccagttacgaa
agtacccgccagtcgcaattctcccgcgtagccagcctcggcaccgagggccgcgcaagt
gccgtgaccgtgctgtcacagtccgtcgtgcggaccctgcgcaccgaggaagatcttgat
gacgaagcgcgaaaatttctggcgttcagtgacaaccgccaggacgcgagcctacaagcc
ggccacttcaacgacttcgtgttggtcgggatgatccgctcggccctctaccgcgcggcc
gccgaccaccaggaacgcgaaggtgaacccctcaccgatgagaacctgggccccgaagtc
gtcaaagcgctcagtgggcagggattgaagttcttcgcccgcgacgaagaaaccgccgac
gaacccatcccccgcaagaagatccccagagcgctgcgcgatgtggtgacctaccgattg
tgggccgacctcaagcgcggctggcgcatcaccatgcccaacctggagcagaccggacag
ctacgcctggcctacgagggggtggacgagcttgccgccaacaacgacaaatgggcaagc
tgcggggaacccctggccggcgccgaccccgagacgcgacgcgacgtgatgcatgtcgtc
cttgacgaactgcgccgaaacctttgcatcgacaccgaattcctcaccgatgagaagttc
gacgccgtccgccgggccagccgggaatggctgaaagacccgtgggccatctccgacgaa
gccgggacgtacagcggcctggcctaccccggtgggcggcccaagaacgtggccggcatc
ggggcggacctgtacctgtccggcttgggcgcgttcgggcgatggctgcgccgccccaat
cgtttccccgcgttccagcatgccctgaagaccgccgacgcccaggtgatcatcgagcac
ctgatggaggtcatggccaaggcaggcatcttggtgcgcaccgcggtgcccaagcggccc
accggctaccagctgcgcgctgatctcatcgcctggcatcccggtgacggcaagcatcgg
gcgccggaccccatccgcagcaaccagaccgaaggccgggtcaacccgtacttcaaaggc
ctctacgccgagaccgccaaatcactcgtcggcttggaggcccgtgaacacacggcccag
gtcgagccgtcgaaacgccagaggcgcgaagaagagttcggtgaggcccggctgccggtg
ctgtactgctcccccacgatggagctcggcgtcgacatcaagagcctcaacgtggtcggc
atgcgcaatgttccgcccaccccggccaactacgcgcagcgttccggacgggccggccgg
tccggtcagccggccatcgcgctgacctactgcgccaccggcaacgcgcacgacgcctac
tacttccgccgcagtcaggacatggtcgccggagcagtggcaccgccgcggctggagctg
ggcaaccaggatctggttcgcgcccacgcccactcgatctggctggtcaagtgcggcctg
gacctcaaggccagcatggtcgatctgttggagatcgaccagccgggacagccgttgcgc
gccgaggtgctcgcgaccatcgagtcgaaatccagccgcgccgaggcgatcactgcgatc
accgcggtgctggaggccgcctccgaggtcaccagcgccccgtggtggacagacacctgg
gtcaccgacaccgtcgacaaagcgccggcccgtttcaacaatgccgccgaccgctggcgc
ggcctgtacaacgaagcgcagaacgaactcgaccaggccaaccagaccctgaagaccatc
ggcgcctcggaagcctccaaacagcgtgcccgcggccgaatttcggaagcacgggcggca
ctcgacctgctcaagggtcaggtcgacgacgtgctgcagggcgacttctacacttaccgc
tacttcgcgtcggaaggcttcctgcccggctactccttcccccgactcccgctatcggcg
ttcattccggccgaacgccgcacccgcagcggcggcgagggcgatttcatccaacgccca
cgattcgtggcgatcagcgagttcggtcccggcgcgttcatctaccacgagggcgcccgg
tacgaggtcaaccgggtcagcctgcccgcccgtgaggacggcaccggtgtgcacatcagt
gagatcaaacggtgcggtgcctgtgggtatctacacgagaccaccgagcccgacctctgc
cagcattgcggcagcccgttcggcatcgaggccaccatgggcaacctgatgcggctgctg
tcggtcaagacccgtcgccgtgaccgcatcagcgccgacgaagaagagcgccagcgcgcc
ggccacgaaattgtgacaaccattcgctttgtgccgcatggggttcgggccggacaactc
accagcaccatcaccgagggtgggcatgaactcggcaccatgacctacggcgacaccgcg
ttgatccgccggatgaacgtcggcctgcgccgccgcaaggacaaagatgtccgcggttac
gtgctggacaccgtcgaaggccgctggtgcaaggaagccgacctggccaagaacgtgcac
ggtgaggcgccgcggtaccagcgggtgatcccctatgtcgaggaccaccgcaacgccctg
ctgctccatctggatccctcgatcgggaccgatcagcggatggccgcaatgtatgcgctc
aagcgcggaatcgaagccgtctaccagttggagggctccgaactcgcggtcgaagccctg
ccctccaacaccggcgacgacgcgtggtcacgactgctgttcttcgaagctgccgaaggt
ggggccggcgtgctgcgacgcttggccgccgaggacgggcagctcacgcgggtggcacga
aaagcactggaaattttgcacttcgaccccgacacgggtgaagaccgcaaacgcgccccc
cacgcgaccgaagactgcgcgcaagcgtgctacgactgcctgctgtcctacagcaaccag
tgggaccaccagcacctggaccgacactgcgtgcgcgatctgctcaagcggctcgccgtg
tcgagcatcgccgtcggagccggcggtgaggcaccggacactcaacttgagcgactggag
caggcctgcgacagcgagctggagaagaagttcttggcaatgcttgtgcagcatggctac
cgcctgcccgatgacgcgcagcagatcgtcacaggcttgtatgtccggcccgatttcgct
taccacgtcgacggtatggacgtcgccatctttgtcgatggtccccatcacgacgcagcc
catcagcaggagaaggacgaacaggcgcgcatgaagctcgaagacgaggccggttggttg
gtgctgcggttccaccaccgggacgccgaagcgggctggctcaacacgatcgccgaacac
agcggcgtcttcggcgaagccagggccaacgcgtga
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integrated database retrieval system
