Mycolicibacterium austroafricanum: JN090_05935
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Entry
JN090_05935 CDS
T10323
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
maus Mycolicibacterium austroafricanum
Pathway
maus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JN090_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maus03021
]
JN090_05935
03400 DNA repair and recombination proteins [BR:
maus03400
]
JN090_05935
Enzymes [BR:
maus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JN090_05935
Transcription machinery [BR:
maus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JN090_05935
DNA repair and recombination proteins [BR:
maus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JN090_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QRZ08078
LinkDB
All DBs
Position
1232628..1233680
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEDVLAENRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADQAAHFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWNSDAGYDLEDNQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcacagcgccccaccctcagcgaagatgtgctggccgagaaccggtcccag
ttcgtcatcgagccgctggagcccggattcggttacaccctcgggaactcgctgcgccgc
acgctgctgtcgtccatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtgcccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggtctggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggaccgggtgaggtcaccgcgggtgacatcgtgccgccggccggcgtcacggtgcacaac
cccgacatgcacatcgccaccctgaacgacaagggcaagctcgaggtcgagctggtcgtc
gagcgcggccgcggctacgtgcctgccgtgcagaacaaggcctccggcgccgagatcggc
cgcatcccggtcgattcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcaccccgcgtgacgcgctggcttcggccggtaagacgctggtcgaattgttcggt
ctggcacgggaactcaacgtcgaggccgagggcatcgagatcggcccgtcgccggccgag
gccgatcaggccgcgcacttcgcgctgccgatcgacgatctggacctgacggtgcggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtgggcgagctcgtggcccgcacggag
tccgatctgctggacatccgtaacttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagttgggtctgtcgctcaaggacagcccggccagcttcgatccgtccgaggtg
gccggctacgacgtcgccaccggcacgtggaacagcgacgccggctacgacctggaggac
aaccaggactatgccgaaaccgaacagctctag
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