Mycolicibacterium austroafricanum: JN090_09820
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Entry
JN090_09820 CDS
T10323
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
maus Mycolicibacterium austroafricanum
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maus03036
]
JN090_09820 (smc)
Chromosome and associated proteins [BR:
maus03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JN090_09820 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_21
AAA_15
AAA_29
Tup_N
ABC_tran
BST2
Motif
Other DBs
NCBI-ProteinID:
QRZ08768
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All DBs
Position
2056709..2060293
Genome browser
AA seq
1194 aa
AA seq
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MHLKSLTLKGFKSFASPTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKTLRGGK
MEDVIFAGTSSRAPLGRAEVTLTIDNSDNALPIEYSEVSITRRMFRDGAGEYEINGSSCR
LMDVQELLSDSGIGREMHVIVGQGKLSEILESRPEDRRAFIEEAAGVLKHRKRKEKAVRK
LDSMSANLARLTDLTTELRRQLKPLGRQAEMARRAQTIQADLRDARLRLAADDLVTRKAE
FDDTNQAETTLRREHDELTERMEARTRELDAHESAVADLSERADAAQQRWFRLSALAERV
SATVRIASERAQHLDAEPDFSAGPDPDELEAQADAIAEQEQLLLDELAESQARLESARAE
LGEREQAAAEAERAHMAAARAEADRREGLARLSGQVDTMRTRVDSVDETVARLTASIDEA
GARAQQTQAEFETVQGRVAELDSGEVGLDEHHDRTIAALRLADERVTELQAAERAAERRV
ASLQARIDALSVGLDRKDGAAWLKENRSGAGLFDSLANLVKVRPGHEAAIAAVLGAAADA
LAAENSGAARDALAALKESDGGRAAIVLGDWPARNPATGQLPAGAAWATDLVDPAPRIQG
AVTAMLGGVAVVGDLTAALELVAAQPELRAVTADGDLVGAGWVSGGSDRKPSTLEITSEV
DKARAELVDAERQTGELSAALSGALAEQAARQDAAEQALAALNESDAAISAIYEQLGRLG
QDARAADDEWQRLIKQRDELEAGRNRTVEELAELELRLHNAQQEPMFDVEVVDRTEFTAA
AEAARSAEVEARLAVRTAEERANAVRGRADSLRRAAVAEREARARAQRAREARVQAAAVA
AAVAESGRRVAQRLADAVAVASRIRDEVAAERHVRAAALTKAREEVTELTTRITALTDSL
HRDEVAKAQAALRIEQLEQQVLEQFGIAVADLIAEYGPDVPLPPSELEMAEYEQAKERGE
QVTAPAPMPYDRPTQERRAKRADKELRELGRVNPLALEEFAALEERYNFLSTQLEDVKAA
RKDLLDVIADVDSRILQVFTEAYMDVEREFTQVFSTLFPGGEGRLLLTDPSDMLTTGIEV
EARPPGKKIKRLSLLSGGEKSLTAVAMLVAIFRARPSPFYVMDEVEAALDDVNLRRLISL
FEQLRERSQLIVITHQKPTMEVADALYGVTMRGDGITTVISQRMRGQELVASPS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaagagtctgacgctgaagggcttcaagtccttcgcctcgccgacgactctg
cgcttcgagccgggcatcacctgcgtcgtcggaccgaacggctcggggaaatccaacgtc
gtcgacgcgctgacctgggtgatgggcgaacagggcgccaagacgctgcgcggcggcaag
atggaggacgtcatcttcgccgggacgtcgtcgcgggcgccgctgggccgcgccgaggtg
acgttgacgatcgacaactccgacaacgcgctgccgatcgagtactccgaggtttcgatc
acccggcggatgttccgtgacggcgcgggggagtacgaaatcaacggcagcagttgccgt
ttgatggatgtgcaggagttgctcagtgactccggcatcggtcgtgagatgcacgtcatc
gtcgggcagggcaagctctcggagatcctggaatcccggcccgaagaccgccgggcgttc
atcgaggaggccgccggggtcctcaagcaccgcaagcgcaaggaaaaagcggtccgcaag
ctcgactcgatgtcggccaacctggcgcggctgacggacctgaccaccgaactgcgccgc
cagctcaaaccgctgggcaggcaggccgagatggcgcgccgcgcgcagacgatccaggcc
gatctgcgtgacgcgcgcctgcggcttgccgccgacgacctggtgacccgcaaggccgag
ttcgacgacaccaaccaggccgagaccacgctgcgtcgtgaacacgacgaactcaccgag
cgtatggaggccaggacgcgcgagctcgacgcccacgagagcgccgtggcggacctcagt
gagcgcgccgacgcggcccagcagcggtggttccggctgtcggcgctggccgaacgggtg
agcgcgaccgtgcgcatcgccagcgagcgcgcccagcatctcgacgccgaaccggacttt
tccgccggtcccgaccccgacgaactcgaggcgcaggcagacgcgatcgccgagcaggaa
cagctgctgctcgacgagctggccgaatctcaggcccgcctggaatcggccagagccgaa
ctcggcgaacgtgaacaggccgcggccgaggccgaacgtgcacacatggcggctgcgcgg
gcagaggccgaccgccgcgagggcctggcccggctgtccggccaggtcgacaccatgcgc
acccgggtggactccgtcgacgagacggtcgcgcggctgaccgcgagcatcgacgaggcg
ggtgcccgcgcccagcagacccaggccgagttcgagaccgtgcagggtcgcgtcgccgag
ctcgactccggcgaggtcggactcgacgagcaccacgaccgcaccattgcagcactgcgc
ctggccgacgagcgcgtcaccgagctgcaggcggccgagcgcgccgccgagcgccgggtc
gcctccctccaggcccgcatcgacgcgctgtcggtgggcctcgaccgcaaagacggtgcg
gcgtggctgaaggagaaccgcagtggtgcagggcttttcgattcactcgccaacctggtc
aaggtgcggcccggccacgaggcggcgatcgcggctgtgctcggagccgcagccgatgcg
ctcgccgccgagaactccggggccgccagggacgcgttggcggcgctgaaggagtccgac
ggcggccgtgccgccatcgtgctcggggactggccggcgcggaacccggccacgggtcag
ctgcccgcaggcgcagcgtgggcgaccgacctcgtcgaccccgcgccgcggatccagggt
gcggtcaccgcgatgctcggcggcgtggcggtagtcggcgacctcactgccgcactggaa
ctcgttgccgcacaaccagagttgcgtgcagtgaccgccgacggtgacctggtcggcgcg
ggctgggtcagcggtggctcggaccgcaaacccagcacgctggagatcacctccgaggtc
gacaaggcgcgcgccgaactggtcgatgccgagcggcagaccggcgagctgtcggcggcg
ctgtcgggcgctctggcggagcaggccgccaggcaggacgccgccgaacaggcgctggcc
gcgctgaacgagtccgacgcggcgatctcggccatctacgagcagctgggccggctcggc
caggacgcgcgcgcggccgacgacgagtggcagaggctgatcaagcagcgcgacgagctc
gaggccggccgtaaccgcaccgtggaggaactcgcggagctggaactgcggctgcacaac
gcccagcaggaaccgatgttcgacgtcgaagtcgtcgaccgcacggagttcacggccgct
gccgaggcggcgcgttctgcggaggtggaggcccgcctggcggtgcgcaccgccgaggaa
cgcgccaatgctgttcgcggacgggctgattcgctgcgtcgggccgccgtcgccgaacgc
gaggcgcgggccagggcgcagcgggcccgggaggctcgcgtgcaggcggccgcggtggca
gccgccgtcgccgagtccggcaggcgcgtcgcgcagcggttggccgacgcggtggccgtc
gcatcgcggattcgcgacgaagtggccgccgagcgccatgtccgcgcggcggcgttgacc
aaggcccgcgaagaggtcaccgagctgaccacccggatcaccgcgctcaccgactcactg
caccgcgacgaggtcgccaaagcgcaagcggcacttcgcatcgagcagctggagcagcag
gtgctcgagcagttcggcattgcggtcgccgatctgatcgccgagtacggacccgacgtc
ccgctgccgccgtccgagctggagatggccgaatacgagcaggccaaggaacggggggag
caggtcaccgcgcccgcgccgatgccctacgaccgacccacccaggaacgccgggccaag
cgtgccgacaaggagctgcgggagctcgggcgggtgaatccactcgccctggaggagttc
gcggcgctggaggagcgctacaacttcctgtccacccaactcgaggacgtcaaggccgcc
cgcaaggatctgctcgacgtcatcgccgacgtcgactcccggattctgcaggtgttcacc
gaggcctacatggacgtggagcgggagttcacccaggtcttctccaccctgttccccggc
ggtgagggccggttgctgctgaccgacccctccgacatgttgaccaccggcatcgaggtg
gaggcccgtccgccgggcaagaagatcaagaggctgtcgttgctgtccggtggcgagaag
tcgctgacggcggtggcgatgctggtcgccatcttccgggcgcggccgtcaccgttctac
gtgatggacgaggtggaggcggctctcgacgacgtcaacctgcgccgcctgatcagcctg
ttcgagcagttgcgggaacgctcgcagctgatcgtgatcacgcaccagaagccgacgatg
gaggtcgccgacgcgctctacggcgtgacgatgcgcggcgacggcatcaccacggtgatc
tcacagcggatgcggggccaggagctggtcgccagcccgtcctga
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