Mycolicibacterium austroafricanum: JN090_16765
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Entry
JN090_16765 CDS
T10323
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
maus Mycolicibacterium austroafricanum
Pathway
maus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JN090_16765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maus03019
]
JN090_16765
03009 Ribosome biogenesis [BR:
maus03009
]
JN090_16765
Enzymes [BR:
maus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
JN090_16765
Messenger RNA biogenesis [BR:
maus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JN090_16765
Ribosome biogenesis [BR:
maus03009
]
Prokaryotic type
rRNA processing factors
JN090_16765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QRZ04669
LinkDB
All DBs
Position
3506856..3509756
Genome browser
AA seq
966 aa
AA seq
DB search
MADNENFEAATHDLTDEPQLAADSSGSAKDAPAPERLRVHSLARVLGTTSRRIIDALVEL
DGRTRSAHSTVGREEADRVREVLAEPEVATPEPDPEASTPEPAAPELQAPDVDAETVTED
EPESRLILEAPVAPVSEPADYLPLFVAPQPVRFDEHDHDDDDGDDVDDDGDDVDSESDSD
EDQPGRPAAKRRRRGRRGRGRGRGEQNGDESSADSDEGDVDTEKAQSGESADDSDDDSGE
DDGTGADGATRRRRRRRRRKSGSDDDGENGSPDDPPNTVVHEREPRKSANRGDKTSSDSE
IQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERMMVIRDKVRTEPPHE
GARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLY
AGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPG
ASSTGISRKLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEEDIRSDVERLQKRWTEI
EAKAAEITEKKAGAAVALYEEPDVLVKVIRDLFNEDFTGLTVSGDHAWKTINDYVTAVAP
ELLPRMTQYEPASPDAPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRTEAMTVVDVNT
GKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTE
ALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTCSHCAGRGIMLHGDPVDSMAPA
NGRKSEPGTGRRSKRGKRGARAEQEVPVVKVPSHSPGEHPMFKAMAAANGKHEDDDSEHE
DDGTAVPPEEVAELDADATRAVTDSDDDDLDDDFDDEDADDEDADDEDTDDEDEIDLDDD
DDEADDDIEELDDEDSDDEETDEDSDDEDTDGEDSDEEEEPVAVAVRPGRQRRRAAARPA
GPPSQD
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaatgagaactttgaagcagcaacccacgacctcacggatgagccacagctt
gccgctgactcgtccgggtcggcgaaggatgcaccggcgcctgaacggttgagggttcac
tccctggcccgggtgctcggcaccaccagcaggcggatcatcgatgcgctggtcgagctc
gacggtcgcacccgcagcgcgcactcgaccgtgggtcgggaagaagccgaccgggtgcgt
gaggtgctcgccgagcccgaggtcgccacgcccgagccggatcccgaggcgtcgaccccg
gagccggccgccccggagttacaggcccccgatgtcgacgccgaaacagtcaccgaggac
gagccggagtcccggttgatcctggaggcccccgtcgcgccggtcagcgagcccgccgac
tatctgccgctgttcgtcgcgccgcagcccgtgcggttcgacgaacacgaccacgacgac
gatgacggcgacgacgtggacgacgacggcgacgacgtggactccgagtcggactccgac
gaagaccagccgggccgccccgccgccaagcgccgcaggcgcggcaggcgcggacgcggg
cgcgggcgcggcgagcagaacggtgacgaatcctccgccgactccgacgagggtgacgtc
gacaccgagaaggcccagtccggcgagtccgccgacgactccgacgacgacagcggtgaa
gacgacggcaccggtgccgacggcgccacccgcaggcgtcgccgtcgccgtcgccgcaag
tcgggatcggatgacgacggcgaaaacggttcacccgacgatccgcccaacaccgtcgtc
cacgaacgcgaaccccggaagtccgcgaaccgcggcgacaagacgtcgtcggattcggag
atccaggggatcagcggctccacccggctggaggccaagaggcagcgccgcagggacggc
cgcgacgccggccggcgcaggcccccgatcctcagcgaggcggagttcctggcccgccgc
gaagccgtcgagcggatgatggtgatccgcgacaaggtccgcaccgagccgccgcacgaa
ggcgcccgctacacccagatcgcggtgctcgaagacggcgtggtggtggaacacttcgtg
acgtctgcggcgtcagcttctttggtgggcaacatctacctcggcatcgtgcagaacgtt
ctgccctcgatggaggcggcgttcgtcgacatcggccgcggccgcaacggtgtgctgtac
gccggagaggtcaactgggaggccgccgggctcgggggcgcacaacgcaagatcgagcag
gccctcaagccgggcgattacgtcgtcgtccaggtcagcaaggatccggtcgggcacaag
ggcgcccggctgaccacccaggtgtcgctggccggccgctacctggtgtacgtgcccggt
gcgtcgtcgaccgggatcagccgcaagctgcccgacaccgagcggcagcggctcaaggag
atcctgcgtgaggtcgtcccgtccgacgccggtgtgatcatccggaccgcctcagagggc
gtgaaggaagaggacatccgctccgacgtggagcgcctgcagaagcggtggaccgagatc
gaggccaaggccgccgagatcaccgagaagaaggccggggccgcggtcgcgctgtacgaa
gagcccgacgtgctggtcaaggtgatccgcgacctgttcaacgaggacttcaccggcctg
accgtgtcgggtgatcacgcgtggaagacgatcaacgactacgtgaccgcggtggctccc
gaactgctgccgcggatgacccagtacgagcccgcgtcgcccgacgcgcccgacgtgttc
gccgtgcaccgcatcgacgaacaactcgccaaggcgatggaccgcaaggtatggctgccg
tcgggcggcacgctggtcatcgaccgcaccgaggcgatgacggtggtggacgtcaacacc
ggcaagttcaccgggtcgggcggcaacctcgaacagacggtgacccgcaacaacctggag
gccgccgaggagatcgtgcgtcagctccggttgcgtgacatcggcggcatcgtggtcatc
gacttcatcgacatggtgctggaatccaatcgcgatctggtgctgcgccgactgaccgag
gccctggcccgcgaccgcacccgtcaccaggtgtcggaggtgacctcgctcggcctggtg
cagttgacccgcaagaagctcggcaccggcctgatcgaggcgttctcgaccacgtgcagc
cactgcgctggccgcggaatcatgttgcacggggaccccgtcgactcgatggcgcccgca
aacggccgcaagtccgagccggggaccgggcggcgcagcaagcgcggtaaacgtggtgcc
cgggccgagcaggaggtgccggtcgtcaaggtgccgtcgcactcaccgggtgagcacccg
atgttcaaggcgatggccgctgccaacggcaagcatgaggacgacgattcggaacacgag
gacgacggcaccgcggtgccgcctgaagaggtcgccgaactcgacgccgatgccacccgg
gcggtgaccgacagcgacgacgacgacctcgacgacgacttcgatgacgaggacgccgac
gacgaggacgccgacgacgaggacaccgacgacgaggacgagatcgacctcgacgacgat
gacgacgaggccgatgacgacatcgaagaactcgatgacgaggactccgatgacgaggag
accgacgaggactccgatgacgaggacaccgacggggaggactccgacgaggaggaggaa
cccgtcgccgtagctgtccggccaggtcggcaacgcaggcgcgcagcagcgcgacccgct
ggtccgcccagtcaggactga
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