Mycolicibacterium austroafricanum: JN090_17740
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Entry
JN090_17740 CDS
T10323
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
maus Mycolicibacterium austroafricanum
Pathway
maus03030
DNA replication
maus03430
Mismatch repair
maus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JN090_17740
03430 Mismatch repair
JN090_17740
03440 Homologous recombination
JN090_17740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maus03032
]
JN090_17740
03400 DNA repair and recombination proteins [BR:
maus03400
]
JN090_17740
Enzymes [BR:
maus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JN090_17740
DNA replication proteins [BR:
maus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JN090_17740
DNA repair and recombination proteins [BR:
maus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JN090_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
Motif
Other DBs
NCBI-ProteinID:
QRZ04847
LinkDB
All DBs
Position
3734979..3736847
Genome browser
AA seq
622 aa
AA seq
DB search
MGQLSFADVDPAADPTLRETTFVVVDLETTGGRASGEQHDSITEIGAVKVRGGEVLGEFA
TLVDPGRAIPPQIVALTGITSAMVYDAPKIDAVLPSFLEFCRGAVLVAHNAGFDIGFLRA
AAERHQLPWPKPPVLCTVTLARRVLTRDEAPSVRLSALAQLFRAGTTPTHRALDDARATV
DVLHGLIERVGNQGVHTYAELRSYLPDVTPAQRSKRHLARALPRSPGVYLFRGPSDEVLY
VGTAVDLRRRVSQYFNGADPRTRIKEMASLAIRVDHVECAHGLEAGVRELRLLAAHAPPY
NRRSKFPHRWWWVTLTDEAFPRFSTVRTPRTDSAVGPFRSRSDATEAAALMARFTGVRTC
TNRLGRSAVHGPACPEREVAPCPAVRGADAEAYGAATRDALALIDGGCSRPLAAALSHIA
DLAERNRYETAARLRDHTAAAIDVLWRGQRLRALSAIAELVAAKPDGNRGWHLVVVRHGQ
LAAAGVAPCGVPPMPVVDALTAAAQAVLPTGGPLGGALVEETALIARWLTQPGVRIVCAD
AGYCSPVGAAGRFAGWAATARSARIAAEQLTDRFGGSEPGRSELLSEPHPTREQLFGRPG
VDRVLRPREPGLPRRNPLGVAG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggggcagctcagcttcgccgatgtcgacccggcggccgaccccacgctgcgggagacc
accttcgtcgtcgtcgacctggagaccaccggcggccgcgcgtcgggcgagcagcacgac
tccatcaccgagatcggggcggtcaaggtccgcggcggcgaggtgctcggcgagttcgct
actttggtcgatcccgggcgtgccatcccgccgcagatcgtcgcgctgacgggaatcaca
tcggcgatggtgtacgacgcaccgaagatcgacgccgtcctcccctcgttcctcgagttc
tgccgcggcgccgtgctggtcgcccacaacgccgggttcgacatcgggtttctgcgcgcg
gccgccgagcgtcaccagctgccctggccgaaacccccggtgttgtgcaccgtcacactg
gcccgccgggtgctgacgcgagacgaggcgcccagcgtgcggctctcggcgctcgcgcag
ctcttcagggccggcaccacgcccacccaccgcgcactcgacgacgcgcgcgccaccgtc
gacgtactgcacgggctgatcgagcgcgtcggcaaccagggcgtgcacacctacgccgag
ctgcgctcttacctgcccgacgtgacacctgcgcaacgcagcaagcgtcacctggcccga
gccctgccgcgcagccccggtgtgtacctgttccgcggcccgtccgacgaggtgctctac
gtcggcaccgccgtcgacctgcggcgccgtgtctcgcagtacttcaacggcgccgacccg
cgcacccggatcaaggagatggcgtcgctggccatccgtgtcgaccacgtcgagtgcgcc
cacggcctggaggccggggtacgcgagctgcgcctgctggccgcccacgcaccgccgtac
aaccggcgatccaagttcccccaccggtggtggtgggtgacgctgaccgacgaggcgttc
ccccggttctcgaccgtgcgcaccccgcgcaccgacagcgccgtcggcccgttccggtcc
cgctccgacgcgaccgaggccgcggcgctgatggcgcgcttcaccggggtgcgcacctgc
accaaccggctgggccggtcggctgtccacgggcccgcctgtccagagcgcgaggtcgcc
ccctgccccgccgtccgcggcgccgacgccgaggcatacggcgcggcgacgcgggatgcg
ctcgcactgatcgacggcggctgcagcaggccgctggcagccgcgttgtcccacatcgcc
gatctcgccgagcgcaaccgctacgaaaccgcggcccgactgcgagaccacaccgccgcg
gcgatcgacgtgctgtggcgcggtcagcggctgcgggcactgtcggcgatcgccgagttg
gtggccgccaagcccgacggcaaccgcggctggcaccttgtcgtggtccggcacggtcag
ctcgcggccgcgggcgtggcgccgtgcggggtgccgccgatgccggtggtggacgcgctg
accgccgccgcacaggccgtgctgcccacggggggcccgctgggcggcgcactggtcgag
gagacggcgctgatcgcgcggtggctcacccagccgggtgtgcggatcgtgtgtgccgac
gccggctactgctcaccggtgggcgccgccgggcgcttcgcgggctgggccgccacggca
cgctcggcgcgtattgccgccgaacaactcaccgaccggttcggcggctcggagccgggc
cgttcagagctgttgagtgaaccgcacccaacgcgcgagcagctgttcggccgccccgga
gtcgatcgcgtccttcgcccgcgcgagcccggactcccacgccggaacccacttggcgtc
gctggatag
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