Mycolicibacterium austroafricanum: JN090_23140
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Entry
JN090_23140 CDS
T10323
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maus Mycolicibacterium austroafricanum
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maus03032
]
JN090_23140
03400 DNA repair and recombination proteins [BR:
maus03400
]
JN090_23140
Enzymes [BR:
maus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JN090_23140
DNA replication proteins [BR:
maus03032
]
Prokaryotic type
DNA Topoisomerases
JN090_23140
DNA repair and recombination proteins [BR:
maus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JN090_23140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
UPF0149
Motif
Other DBs
NCBI-ProteinID:
QRZ05791
LinkDB
All DBs
Position
complement(4896589..4897611)
Genome browser
AA seq
340 aa
AA seq
DB search
MRLTRSNLNAPGVVRKRRGKGFAYYTPGGEPLDDPDTAQRIKELVIPPAWKDVWISPKPS
GHIQAVGTDAAGRRQYLYHEKWHQERAEEKFDRVLELSVLLPEWRAQIAGDLTRRGLRRE
RVLALALQLLDRGYFRAGGEQYAEEHEHYGLATLLREHVSLRNGAVVFDYPAKSGVRRSV
EIDDAEVVRAVRALMRREDSSERLLVCRNGSGDGWADVRADDLNARFKELVGDEYSVKDL
RTWHGTVLAAAAFADAKEPTSKSAIKRAAAAVMKEVAEELGNTPAVARASYVDPRLVDGY
AQGMTIGAAVRRAADTSSPEERQEVLEKATRTLIRRVARS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctcacacgttccaacctgaacgcccccggggttgtccgcaagcgtcgcggcaag
gggttcgcgtactacacacccggcggtgaaccgctggacgatcccgacacggcgcagcgc
atcaaggagttggtcatcccacccgcctggaaggacgtgtggatcagccccaagccgagc
ggccacatccaggcggtgggcaccgacgccgccggccgccgccagtacctctaccacgag
aagtggcatcaggagcgggcggaggagaagttcgaccgggtgctggagctgtccgtactg
cttccggagtggcgcgcgcagatcgccggggatctcaccagacgtggcctacggcgcgag
cgcgtgctggcgctcgcgctgcagcttctcgaccggggttacttccgggcgggcggcgaa
cagtacgcggaggaacacgagcattacgggctggcgacgctgctccgtgaacatgtttcg
ctgcgcaacggcgccgtggtgttcgactatccggccaagagcggcgtcaggcgcagcgtc
gagatcgacgacgccgaggtggtgcgtgcggtgcgcgcgctgatgcggcgcgaggacagt
tccgagcgattactggtgtgccgcaacggatccggagacggctgggcggatgttcgcgcc
gacgatctcaatgcccgcttcaaggaactagtgggggacgagtacagcgtcaaggatctg
cgtacctggcacggcactgttctggccgccgcagcgttcgccgacgcgaaggaaccaacc
tcgaagtcggcgatcaagcgtgccgcggccgcggtgatgaaagaggtcgccgaggagctg
ggaaacacccccgcggttgccagggcgtcgtatgtcgacccgcgcctggtcgacggatac
gcacaggggatgacgatcggcgcagctgtacggcgtgccgcggacacctcctcaccagag
gagcggcaggaggtcctggaaaaggccacccggacgctgattcgccgggtggcgaggagc
tag
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