Mycolicibacterium austroafricanum: JN090_24185
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Entry
JN090_24185 CDS
T10323
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
maus Mycolicibacterium austroafricanum
Pathway
maus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JN090_24185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maus03400
]
JN090_24185
Enzymes [BR:
maus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JN090_24185
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JN090_24185
DNA repair and recombination proteins [BR:
maus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JN090_24185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QRZ05984
LinkDB
All DBs
Position
complement(5101039..5101962)
Genome browser
AA seq
307 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLTVGRVDVAALSVLKTFDPPISALHGREVTGANRWGKYLG
LQAGELHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGPPGESPGPNVAAGAAPG
PNVAAGAAPGFDLTEAGTQKRLAVWLVTDPMAVPQIASLGPDALSLTGQALAEVLGGQSG
RIKTVITDQKVIAGIGNAYSDEILHVAKLSPFATANKLTPSQLVTLHDAMISVLTDAVTR
SVGQQAATLKGEKRSGLRVHARTGLPCPVCGDTIREVSFADKSFQYCPTCQTGGKVLADR
RMSRLLK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaagccctcgccgatcacctccgccgccacgcggtcggc
ctgaccgtcggccgggtcgacgtcgcggcgctgtcggtgctcaagaccttcgacccgccg
atctccgcgctgcacgggcgggaggtgaccggagccaaccgctgggggaagtacctcggg
ctgcaggccggtgagttgcatctgatcacccatctgtcgcgcgcaggctggctgcgctgg
tcggacaagctcgccgctgcgccgctgaagccaggcaagggaccgatcgcgctgcgggtc
catctgggccccccgggggagtccccggggccgaatgtcgccgccggggcggctccgggg
ccgaatgtcgccgccggggcggctccgggcttcgacctgaccgaggccggtacccagaaa
cgcctcgcggtgtggctggtcaccgacccgatggcggtcccgcagatcgcctcgctgggt
ccggacgcgctgtcgttgaccgggcaggcgctggcggaggtgctcggtgggcagtcgggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccgggatcggcaatgcctacagc
gacgagatcctgcacgtcgccaagctgtcgccgttcgccacggcgaacaaactgacgccg
tcgcaactggtgacgctgcacgacgcgatgatctcggtgctgaccgacgcggtgacccgg
tccgtcggccagcaggcggccaccctcaaaggggagaagcgttccggcctgcgggtgcac
gcccgcaccggcctgccctgcccggtctgcggggacaccatccgcgaggtgtccttcgcc
gacaaatcgttccagtactgcccgacgtgccagaccggcggcaaggtgctcgccgaccgc
cgcatgtcccgacttctcaaatag
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