Mycolicibacterium austroafricanum: JN090_29925
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Entry
JN090_29925 CDS
T10323
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
maus Mycolicibacterium austroafricanum
Brite
KEGG Orthology (KO) [BR:
maus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maus03032
]
JN090_29925 (gyrA)
03400 DNA repair and recombination proteins [BR:
maus03400
]
JN090_29925 (gyrA)
Enzymes [BR:
maus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JN090_29925 (gyrA)
DNA replication proteins [BR:
maus03032
]
Prokaryotic type
DNA Topoisomerases
JN090_29925 (gyrA)
DNA repair and recombination proteins [BR:
maus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JN090_29925 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
LAMB1
Motif
Other DBs
NCBI-ProteinID:
QRZ07009
LinkDB
All DBs
Position
6277743..6281531
Genome browser
AA seq
1262 aa
AA seq
DB search
MTDTTLPPGGEAGDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
FDSGFRPDRGHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCLTGDSMVRLPFGQSVRIGDVVSGARPNSDNEIELKVLDRHGNPVLADAL
FHSGDHETFTVRTAEGYEVTGTANHPLLCLVDVGGVPTLLWKLIEEIRPSDRVVLQRTPP
VEFGPADWYETMEALLLGAFISEGFVSESRAGFNNLDRDYFNMVVAAYDTVIGGPRYVYE
RKIASGSTLLELDIQNLASLRQSRLVGLLGQRSAAKMVPEWLWNSAAAVKRAFLQALFEG
DGSCSALPRNTIQVSYSTRSGQLAKDVQQMLLEFGVISRRYLHATGEHKVVITNRSSAEA
FCTRVGFGGAKQHKLQKLLSDLPERAAGLDGDHVPGLAAFIRRESGGKWVDKEWLRKHNI
DRMSRWRRDGSEILSRIADADVRAIATELTDGRFYYAKVASVVSAGVQPVYSLRVDTDDH
SFISNGFVSHNTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGS
GGIAVGMATNMPPHNLRELAEAVYWCLENYEADEEATLEAVCERVKGPDFPTHGLIVGSQ
GISDTYTTGRGSIRMRGVVEIEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAG
ISNIEDQSSDRVGLRIVVEIKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRL
DQLIRLYVNHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASQTVEIAR
SGLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRAI
VHDELKELVDKYGDDRRTRIIPADGDVADEDLIAREEVVVTITETGYAKRTKSDLYRSQK
RGGKGVQGAGLKQDDIVNHFFVCSTHDWILFFTTQGRVYRAKAYDLPEASRTARGQHVAN
LLAFQPEERIAQVIQLKSYEDAPYLVLATRNGLVKKSRLVDFDSNRSGGIVAVNLRDGDE
LVGAVLCSAEDDLLLVSAKGQSIRFSATDEALRPMGRATSGVQGMRFNEEDQLLSLNVVR
EDTYLLVATSGGYAKRTAIEEYSAQGRGGKGILTIQYDRRRGTLVGALIVDDDTELYAIT
SGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLIAIARNAEVGDSTDEVNTDLDATDDE
ES
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccacgttgccaccgggcggcgaagcaggcgaccgcatcgagccggtcgac
atccagcaggagatgcagcgcagctacatcgattacgcgatgagcgtgatcgtcgggcgc
gcgctgcccgaggtgcgggacggtctcaagccggtgcaccgccgcgtgctgtacgcgatg
ttcgactccggcttccggcctgatcgcggccacgcgaaatccgcacgctccgttgccgag
acgatgggtaactaccacccgcacggcgatgcgtcgatctacgacaccctggttcggatg
gcccagccgtggtcactgcgctacccgctggtcgacggccagggcaacttcggctcgccg
ggcaacgacccgccggcggccatgaggtactgtctcaccggcgactcgatggtgagattg
ccgttcgggcagtcggtccggatcggggacgtggtctccggagcccgaccgaattcggac
aatgagattgaactcaaggtgctggacaggcacggtaatcccgttctggccgatgccttg
ttccactcgggtgatcacgaaaccttcacggtgcgaaccgcagaaggctacgaggtcacc
ggaacggcgaaccacccgctgctgtgtctggtggacgtcggtggggttcccaccttgttg
tggaagctgatcgaagagatccgtccgagcgatcgtgtcgtccttcagcggacgccgccg
gtcgaattcgggcctgccgactggtacgagactatggaggcgctgctgctcggagcgttc
ataagcgaaggcttcgtcagtgaatcgcgcgctggattcaacaatcttgaccgcgattac
ttcaacatggtggtcgcggcgtacgacacggttatcggtgggcctcgctatgtgtacgag
cgcaagatcgcttccggctcaaccctgctcgagttggacatccagaacctcgcctccttg
aggcagagccgactggtaggcctgctcggccagcggtcagcagccaagatggttcccgaa
tggctgtggaactccgcagccgcggtcaagcgtgcgttccttcaggcccttttcgagggt
gatggctcttgctcggccttgccgcgcaacacgatccaggtgtcctactccactcgcagt
gggcagttggcgaaggacgtccagcagatgttgctggagttcggcgttatctcccgtcgg
tatctgcacgccaccggtgagcacaaggtggtgatcaccaaccgttccagtgcggaagcc
ttctgtacgcgagtaggattcggcggagcgaagcagcacaagcttcaaaagttgctctcc
gatctgcccgagcgagccgcgggactcgacggcgatcatgttccgggtttggctgcgttc
atccgtcgcgagtccggaggcaaatgggtcgacaaggaatggctacgcaagcacaacatc
gacaggatgtcgcggtggcgtagggatggtagtgagatcctgagccgcatcgccgacgcg
gatgtccgggccatcgcaaccgaactcaccgatggccgcttctattacgcgaaggtggct
tcggttgtgagtgccggcgtgcagccggtctacagcttgcgtgtcgacacagacgaccac
tcgttcatctcgaacggtttcgtcagtcacaacacggaagcgcggctgactccgctggcg
atggagatgctgcgcgaaatcgacgaggagacagtcgatttcatcccgaactacgacggc
cgggtgcaggagccgacggttctgccgagccggttcccgaacctgctcgccaacggttcg
ggcggcatcgcggtcggtatggccaccaacatgccgccgcacaatctgcgggaactcgcc
gaggccgtgtactggtgcctggagaattacgaggccgacgaggaagccacgctggaggcg
gtctgtgagcgggtcaagggaccggacttccccactcacggcttgatcgttggttcccaa
ggtatttcggatacctacaccaccgggcgcgggtccatccggatgcgcggcgtcgtggag
atcgaagaggattcgcggggccgcacctcgctggtcatcaccgagttgccctatcaggtc
aaccacgacaacttcatcacctcgatcgccgaacaggtccgtgacgggaagctcgccggc
atctcgaatatcgaggaccagtccagcgaccgcgtcggtctgcgcatcgtcgtggagatc
aagcgcgacgccgtggccaaggtcgtgctgaacaatctctacaagcacacccagctgcag
accagcttcggcgccaacatgttgtcgatcgtggacggggtgccgcgcaccctgcgcctc
gatcagctgatccgtctctacgtcaaccatcagctcgacgtcatcgtccgccgcaccacc
taccggctgcgcaaggccaatgagcgggcccacatcctgcgcggtctggtcaaggcgctc
gacgcgctcgacgaggtcatcgcgctgatccgggcgtcgcagaccgtcgagatcgcgcga
agtggcctgatcgagctgctcgacatcgacgagatccaagcccaggcgatcctcgacatg
cagttgcgtcgtctcgccgcactggagcgccagcgcatcatcgacgatctggccaagatc
gaggccgagatcgccgacctcgaggacatcctggccaagccggaacgacagcgcgccatc
gtgcacgacgagctcaaggaactcgtcgacaagtacggtgacgaccgtcgcacccggatc
atcccggccgacggtgacgtcgccgacgaggatctgatcgcccgcgaagaggtcgtcgtc
acgatcaccgagaccggctacgccaaacggaccaagtccgacctgtaccgcagccagaag
cgcggcggcaagggtgtgcagggcgccggcctcaagcaggacgacatcgtcaaccacttc
ttcgtctgctccacgcacgactggatcctgttcttcaccacacagggtcgggtgtaccgc
gccaaggcctacgacctgcccgaggcgtcccgcacggcgcgcggccagcacgtggccaac
ctgctggcgttccagccggaggagcgcatcgcgcaggtcatccagctcaagagctacgag
gacgctccttacctggtgctcgcgacccgcaacgggttggtgaagaagtcgcggctcgtc
gacttcgactccaaccgctccggcggcatcgtcgcggtcaacctgcgcgacggcgacgaa
ctcgtgggcgctgtgctgtgctccgccgaggacgacctgctgctcgtgtccgcgaagggc
cagtcgatccgcttctcggcgaccgacgaggcgttgcggccgatgggccgcgcgacctcc
ggcgtgcagggcatgcggttcaacgaggaggaccagctgctctcgctgaacgtggttcgc
gaggacacctatctgctggtggccacgtcgggcggttacgccaagcgcaccgccatcgag
gagtactccgcacagggccgcggcggcaagggaatcctcacgatccagtacgaccgcagg
cggggcaccctagtcggggcgttgatcgtcgacgacgacaccgagctgtatgccatcacc
tccggcggcggtgtgatccgcaccgccgcgcgtcaggtccgcaaggccggacgccaaacc
aagggcgttcgcttgatgaacctgggtgagggcgacacacttatcgcgatcgcgcgcaac
gccgaggtcggcgacagcacggacgaggtcaacaccgacctggacgcgactgatgatgag
gagtcgtag
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